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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00062155 ID=TCONS_00062155|Name=TCONS_00062155|organism=Clytia hemisphaerica|type=transcript|length=3312bp
GTCACCAGATGTTGTTTGGACATttcaataacaaaaaaaaatttagtgaa
gtcatttttcaaaataaattgcGGGCTCGCCATTGTTTTCCTGTTTTCTC
ATTTACCTGTTTACTGGTTCTCAAAATCAAACGACACAGCTTAAAGATAC
AGTTTTATTCACTGTGGTAACAATTTTATAAGTGTTTGAAGGTTATTTTG
TTACTATTATCTTTGGTAACATATTATCTATTTATTGGTTCATTGGTGGT
TTCAAGCCGCTGGACGAATGCAGATCAAAGACACagtattattttgtttt
gtttactgGTCTTCTTTCCCACCGTTTACGATACGAAGTAAAAGTTTTAA
TCAGAACTGTTGACTACATAATTGAAGATATTTATATTTTGGACATACTT
GGAAAACTGTACATAGCTACATTGTAAataattttaatcaaaaacgaaaa
tgaagCTACTTCAAAATTCAACATTTGAATCACTGAGTTCAGCTCTCTCA
GTTCAAggagataatattaatatttGTGGCagtctGGAGAGTTATTCTTG
CAAAATGACTGGCAACGACAAGAAGCTATACAAAGAGCTGAATATGTATG
GTAAAAGCCCTGCAGACTTACAAGCCTTATCGCCATCTGAATCTCAAATG
GAGCAGTTACATGGAATTTCACCGAACTCTCTGTATCTACCACCGATGCA
TCGTATACCAAGCACAGATGAAAGTGACATATCCAATGTATCCGTCATGA
ATCGCAAAATGCTGTTCACTTTAATTTCAACActaaacgcttcatttccc
gaTTACGACTTCAGTTCAGTAAAATCAGAAGCATTCAGTCGAGAAGGAGA
CCTAACTTGGATTGTGAATAATATCAACAGTAACCTGTCAACCTCAATGG
GAGAAGATTTTGTCAAATTAAGTCCAAATTTATGGAAAGCCATTGATGAT
GAGATTTGTCTCTCAGATTGTGAAATATTTAGTTACAATCCAGACATGGA
GTCTGATCCATTTGGAGAAGCTGGATGTCTGTGGTCATTCAATTATTTCT
TCTTCAACAAAGAACTGAAAAGGATTCTCTTCTTCAAATGCAACGGCTCA
AGTCTGTTAGCGGAGTCATCCTCagaatttgaccaatttgtcATGGATCC
TATGGACTGTGAAATGGTAAACTGAGGATGTGGTCTTCAAATACAATTGg
ttgaattgaaaaatctttggACCATGTGGATTACATTCGAGTGTATTTTA
ATAGTATGGTGGTAAAATGCATGGTTGTTTTGGATTGGAATGGCAGGAAT
AACGAATGTTTTGGTTGACACACATAAAAAGAGGAGGGAAAGTATTGGTA
GTAAAGTTTTGCCTTATGTATACTAATCCAAGTCTTCGATATATAACATA
GTATATCTCTTTATTTTTAAAGGTATAATGTGAttagtttttatgttttt
gaatcatgaaacaattttgatttgatttagtGATGTAGCTATTGTTTTGT
TGTACATATTGATGATTActtattattaaaaaatgtttacgaaatcaaaa
atcacaaaagtgacaaaaattataattttattggcAAAGGTGTATATCCC
TTTTCATTTTAATAAGTGTTCAAATACAAAGAAGATTTTTGTTGAGGGCC
ACTTTATATAATTGTTTTACAAGATCAGTCAGAGCTTATCATATTAATGA
CATACATGTATTTTctcttataagcataacgtttataagcatatacaggc
tcagtttttggtaacCTAAACAatagctctattgtttgagaacgatagaa
tactaagcataatacaagcctgatataggggtagacacttgcttataaag
aaaGAAACATGTAATACGTCGTGAGACTCATTCTCAAtcaattaatgaaa
ttttttatcttatggctcaaatttaatttatctgaAGACTCAGGGCTTCG
ACTTGTATACGTTTTGAGAATTTATAACTTTTACGAAATGCTGAAAAAAG
AAGTAAGGTTCGTGAAATTAAGTGTTCGTATTTTGAATAATAATGTTTCG
ATGTTTAGAAGATTTAATGTTTGtgtgtatttaaaaaataagaatatctt
tatcagaaaaaacaactttttttgttGGTTTTATCAACATAATTTGTAAA
TAATGTTTGGTTCCTTTTAAGTTTCTTTTGTCTTGTAAAATTGTcaacct
ttttttttctttcgatctataatttattgaaaattttattttaccatTTA
TCACCCAATCCTGAAAATCTGAAAACCCTCGGCAATGACACAATATTAAG
TCTGAatatcttctgacattacatcacagacccaatagctgattggttgt
gaGTGACGTAAAGTcggtcaatacgtcactttcaaccaatcagctgttgg
aagATATCGAGGTTTTGTCTAAAATTTCGTCATTACCTGGTCTAGGAACT
TTGGATGGGAACTGAATGAAgcttatttttaagaattttctcTTTCTATA
GAAACGAAAGTGTTTTTAAGCTTTTCATTATTCAATAATCCATTCAAGTT
TCTAAGTCTCATCCTTTTTGTGTCACACAGTTTGATTGACCTTTCATATG
AATGCCTGTCATACTCGTGACATTACCTCAAAACAGCTGGAAGAAACGAT
TGATTATGTCTAAATTATTTGACCCTTTCCCTAGTTTTTGACCTTCAACT
CCCCCCTGGTTTAGTTTAGTATATTTATGATTTTAATGTAATGTAAATAT
GACTAGCCTCTATCACCATTTTATTATtgtaaaaatatcttttttttatc
ttgtaattttttttgctcattttttttgttcacttGTTTTATGTCTTAAT
GGTTTTTATTTGCAATAAGAAAAAGTTCTTTTGTGCTTAAGAATAATCAT
GTAAATTGTATGGGCTACTTGCATCAATACTTCTTAAAGCTTCCAAAATA
TCTTTTTGTCCTTGATAATTAGGTGGGTGAATCATGTATGTAACGTCACT
GGGCAGAAACTTTCCTTTAATGTTCtgtaataaaattttacaaGACTTCA
GCAATCATAACTAAGAGACTTAAATATTCAAtcgtagaattttttttcaa
gacttttatATATAGACATTGAACCCACAAGTTACCGACTATACTAGCCG
GTCGACTCCTgtctgaaatttttctttttgatgatgCTGAGTCTAGTGAA
TCAGACTGGAAGCACTCGACGAAGGCTACTTTTCGAAGGATTTCACCAAA
AATTCTagatattaaaaaaatgaacttttgagtttgtaaaatatGATTTA
GATAAGAAAAAT Run BLAST on NCBI protein sequence of TCONS_00062155-protein >TCONS_00062155-protein ID=TCONS_00062155-protein|Name=TCONS_00062155-protein|organism=Clytia hemisphaerica|type=polypeptide|length=241bp
MKLLQNSTFESLSSALSVQGDNINICGSLESYSCKMTGNDKKLYKELNMY
GKSPADLQALSPSESQMEQLHGISPNSLYLPPMHRIPSTDESDISNVSVM
NRKMLFTLISTLNASFPDYDFSSVKSEAFSREGDLTWIVNNINSNLSTSM
GEDFVKLSPNLWKAIDDEICLSDCEIFSYNPDMESDPFGEAGCLWSFNYF
FFNKELKRILFFKCNGSSLLAESSSEFDQFVMDPMDCEMVN Run BLAST on NCBI transcript from alignment at scaffold_362:83261..91603+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00062155 ID=TCONS_00062155|Name=TCONS_00062155|organism=Clytia hemisphaerica|type=transcript|length=8343bp|location=Sequence derived from alignment at scaffold_362:83261..91603+ (Clytia hemisphaerica)
GTCACCAGATGTTGTTTGGACATttcaataacaaaaaaaaatttagtgaa
gtcatttttcaaaataaattgcGGGCTCGCCATTGTTTTCCTGTTTTCTC
ATTTACCTGTTTACTGGTTCTCAAAATCAAACGACACAGCTTAAAGATAC
AGTTTTATTCACTGTGGTAACAATTTTATAAGTGTTTGAAGGTTATTTTG
TTACTATTATCTTTGGTAACATATTATCTATTTATTGGTTCATTGGTGGT
TTCAAGCCGCTGGACGAATGCAGATCAAAGACACagtattattttgtttt
gtttactgGTCTTCTTTCCCACCGTTTACGATACGAAGTAAAAGTTTTAA
TCAGAACTGTTGACTACATAATTGAAGATATTTATATTTTGGACATACTT
GGAAAACTGTACATAGCTACATTGTAAataattttaatcaaaaacgaaaa
tgaagCTACTTCAAAATTCAACATTTGAATCACTGAGTTCAGCTCTCTCA
GTTCAAggagataatattaatatttGTGGCaggtaaatatttttgatgta
TATTTCAGTACTTATAGGTCCTAGCACCCATTATTTATAGCCCTACAGCT
CTTCATACAAAATTAGCGGGAGATGTATGTTTGGACTTTTAGTACCAGAT
GCTGGAGACACAAGCACTTAAACAACCGTGCCAATACTCCTGACAGTCTG
GGGTAAATGTCTGAGAATGGAAAAAAACATCTCACTAGCCCGACACTTTC
AAGACCCTCCTGGcgcaagtgatttttatcaCGTTCTAAAAAACTGTCTA
AACATGGTTACAAAAAATATCTGTCTCCAGGTGATGGACTTTGGTCAAAT
AAAATACTTGGACAGTCTTTGGGGATGATGGTTCagccattaatgaaatt
gaatttgtcacattatCAGCCATATTCGAAAGCAGTGTGGTCTAAATATC
GATACTACCATTTAAGATggctgattttttaaaaatacaagGACACGCGG
TATACGCGGGTGCGTAGTTAGCGGAAGTGCACGGGAACGTTCCGGAccaa
tcactgaaaattgtgtTCCGGAACACCGGAAATGCTCTGGAATCTTCCGG
TGTTCCGGAACACAAATAATACGACACTTTTTGCTCCGGATGTTTCCGGA
GCACcgcgccgggagggtcctacACTTTTTAGTCCGACAACAAAACAGTC
CAAACCCAGACGAAATTGAATCAACCTAGAAGTTTGTCTGCTTCGGCTGT
TTTTTGTCCGAAAATAGTCGCACAATCTTTTATCAATTACGAGCCTCTTC
TATTTGTCTATTTCTATTTCGCtcaaacagttagtcacactagcatccca
ccaaaatgcatatcaaagattaatgctgcgaaagcaaTATATAatttact
tgactcgcaagcaaacaaatgcgccgcaaaacttctaaagagattcatga
aaaaataacccggcgctttttaatgaaattaacattttcaaaaactatga
gaaatcgcctaaaatttgagccatagatgaaaagatttgagccaacactg
acccatttatatgtacagaattatttttactttagcatgTAAGCAAGGCC
TTAAAAACAAAGCgttgtctcgggaattgaatgacaaaattttgttggtt
gatattctggctgctgcacgttcgcaatcAGTCATTtagtctcattttaa
gttttcaagttttaattaattgtcttgggaacttgaagttgattcaggta
actctcatccttgttgttgcaattgcatcctgtagatgactgatgttgtt
ttttctgaaagcttgatttcctagtgtgactaactgtcaaaTGTTTGTCT
TTTTAGATATCACCCATTTCTCTACCCCCACTAATCAGTGAAATCTCTCC
CTCCAAAAGCAAATGTGTTTTCTGATTGCGACTAAAGAACAAATTTATTA
ATTCAGATAAAAGCTCTTTTTAACAAGCCTTGTAAATGACGTTGTTTTTG
CTGAAACACTCATTTTTTCTACCACTCGTTCTTAGACAAAATCTGTTTTG
GGAAACTGGTGCAACCGTCAAATGTATTGCcagactagaaagtgtcggac
ttcTGAAAACTCCCAGTCCAAATTTACCACATGATCACATATGTACACTC
GCAACCGTTTGAGTATGTCACGTGGCTATTAGTATTACAGCATGCCACAT
GGCCAGTACGACACATCACAGTGCCAGTAAGGCATATTTCTCTTATCTTT
ACATACATTGGGCGAACAACTGTCTCCCGCTCTGGCCCTGCTCTGGCCCC
CGTTGTACGCCCACATCCTCTTTGTGTCtcgcattttcaaaaattcatta
gAATTACGCTCAAAGTCatgcaaaaatgacaaaataataaaacaaataat
gAAATGACAGCCCCTCTTTTTTATAATGATGTAAGTAATTATCTCTGTCA
gggtactttaatgggatacaCTTTTtggcctatccgcgaaattcaaaaat
tttgtggggacttaatttcgcaggtggcactattgggtggcaatattttc
acgattttgtgacttatcatgtcaaatcatgcattttgattgttgaaata
cacattattagcgcttctttgatgccagtaaacattcagaaagtatttgt
ttgacatattttgagttttgtttagaaatattttgcggatgaggcccttc
caaatttccattgggacttaatttcgcagatttttgcagatgacacccaa
atccgcgaaatctgcgaaatttaataacatgaaaaccagaatataattct
tatgggaatcaaaactataaattGCACTCagaaacatcaatttgtcagat
caaACAAAATTAATAGTGACACTGTCATCAtcgacaatcaaacaaagaaa
aaagttgtattttatactttttattcacatactgaataattgaaaaatct
tctatgtggtattttttgcaaacttcaaaagacTGATTTTTGTCTTAGCT
TAAAAGTGTTTGTGTGCAGCATCGGGTACAgagtccaaatatgtgtttcc
cgtAACTTTTACATGAACAGCTAGGGCTATGCTGTCTGTTTATAGACCTT
ATGCTATTTGCAGTACCTTTTTATCTCCAGCTATAATTAGGGGTGAAAGC
ATTACATAATGACTCCACAGGATAGCCTGATAGTAGATTAACTTCCTAGC
AGTCAACTTTTATCTATATTGATTTTGCTGTATCAGTGTCCAAGAGCTTA
GTTATTAGGCTTAGTTATTAGAATATATTAAACGCAAAAGATGAGAATTA
GACACATTGAAATTGATCTTCTATCAGGCTGTGGTGTGGGGAGTCtaaac
tgaaaaaaataacatttttctctcttttatgTATTACATAGTATGTTAAA
ATAATGAAGGTTGAAAGAGTGAAGTGGATATTAATCATATTATTAAGTAT
TTTAGAAAATTAAATACTGTGGgctggtctaatgtcgacattcctcttct
aattttgacacccttctttagagataggaataagaAAGGTCGAAATCACT
AATAGACAAAAAATTTATTCCTCTCTGATTGCTATTTGCTATTTGATTGC
TGATTCCGAttgtttcaatcagtgattccaaccttcccattattcctatc
tctactAAAGAAGGGTGTCTAACTACTAATTAGAAGGGATGTGGACATTa
ggattagaccaacttacacaCATTTTTCTAGTtgtgtttgtaatttttct
aaattttttgatatCTGAGAGAGTCAATGTAGCTTAGATTGGTGATTCGA
AAGTGACATTTTAAGTTTGTCAAATAGATAATTGGTTGATAATTATTGTT
TTCCTACTAAAATTgttctatttatttttattttaagtctGGAGAGTTAT
TCTTGCAAAATGACTGGCAACGACAAGAAGCTATACAAAGAGCTGAATAT
GTATGGTAAAAGCCCTGCAGACTTACAAGCCTTATCGCCATCTGAATCTC
AAATGGAGCAGTTACATGGAATTTCACCGAACTCTCTGTATCTACCACCG
ATGCATCGTATACCAAGCACAGATGAAAGTGACATATCCAATGTATCCGT
CATGAATCGCAAAATGCTGTTCACTTTAATTTCAACActaaacgcttcat
ttcccgaTTACGACTTCAGTTCAGTAAAATCAGAAGCATTCAGTCGAGAA
GGAGACCTAACTTGGATTGTGAATAATATCAACAGTAACCTGTCAACCTC
AATGGGAGAAGATTTTGTCAAATTAAGTCCAAATTTATGGAAAGCCATTG
ATGATGAGATTTGTCTCTCAGATTGTGAAATATTTAGGTATGCTCCAGTT
atttttccaacttttttttttctttttcttttttcctttgtttttaggGT
TTTTATTCATTAAGACATGTAAATAATTGAATTAGGGAGTTTTTTTACCA
TGATTTGGTTTGTTATAACAGTAACATTGCTATGGCTTAAGTTTTGTGGT
TGCATATCATGTAATCTTTATCCATCCTCATTCCTTAGTTACAATCCAGA
CATGGAGTCTGATCCATTTGGAGAAGCTGGATGTCTGTGGTCATTCAATT
ATTTCTTCTTCAACAAAGAACTGAAAAGGATTCTCTTCTTCAAATGCAAC
GGCTCAAGgtgagaaatataattttttttctttatgaaaatattttgccg
gACAGGTTTTACAGGGTATTGCATTTCTTTTTAAAGATTGCACTAGCTAG
TTAAGGCTAAAAAAGTAGACTTTGAACTCAGGTTGTATTTAAATATGCTT
CAAAGTCATTACATGGTAATTAgatataattaccattttccatcaatTTT
ATGGACATTTTATCAAGTAAGGCTAATGGAAttcaacaaaaaagaaagaa
agagccTGGAAGCGTTTTTAATTGCCTCGAATGCCCCTTCATTGAACAAT
CAAACCGAAACAAAAACTTTACTACTTTTTCGGAATGGCATAACTTGATT
TTAATTgcaaaacattttaatattttatgtttttattaccCTTGAGAAAT
CATTGTTAATTCTCTAACTCTCGTAGATATCTAATATCTACTATAGCCCA
TGGGAATTAGCAGtgatttctcaaaaacatttcttgtATAAACTGTACAG
CATTTTTAAcgttttatttaaatcatttgCACTGAAGATGACTGTGTCAA
AAAGCTTATGcttaaatttttaaatgaaaaattttcgtGTCTAATTCTTT
ACTGACTTGAATGATCAGCTAATGGAATTAACAATGACATGTCAAATCAT
ATTTGTGATTTTGATAATGAGTGAAGTAAACAGGATGTCTTCATGacatt
tcaaagtttttctacATACAAACATCAATACACTCAACAGAAGGGAAGGA
ATTGTCAGTACAATTATAGAACTATCAAACCAATAAAGTAAACATAACCA
GCCTTTTGACCACAAAACTGCATCATACACTTGTATCCTCTTAACTTCCT
ACCCTACACACCTCCTTTAGATTGTTATAGAGAAAAATAACTATAACACT
TGTTAGAGCTGGTTAGAGAGTATTTGCATTTCCATAACTAATTTGTAGGC
AATCTAGGGTTTTAAACAGTAAAATCTCTTAGTCAGATTACCCACctctt
gaaaaaataaaagacattcTGCCATTCTGCCATTCAGTGGTCAGACTTCC
CCTTCCCCCGCCTTCCAAGTTTTTAAGCCCTGAACAATTTTCCTTTTAGT
CTGTTAGCGGAGTCATCCTCagaatttgaccaatttgtcATGGATCCTAT
GGACTGTGAAATGGTAAACTGAGGTACTGACTTTTGCCCTCCCCCTTTAT
CTCCATTTTGAAAGACCTATGTTAACTTTAACCCATATCAAAGGTATTTA
TCCCCCAATGGTTACATTATCCTATTTCAAGAGCTTTTATTTCCTATGCC
AAACGTCATTAAGTAAAGTTTTTAACCGTTCTACAATTGACTTGAATATA
AGGTACTCAGTGTTTTTCGGATGGTAATTACTCCCATTTGATTTTAAAAC
ACGAGCACTAATCTTTGTCAGTTATAAAAAACACTGAGTATCTTCTGTAT
ACACACTGACTTCCATTCCTTGACTGactgatctattttttcaaattaaa
ctGGGCAAATTTTTCTTAgttcaaaaatctttgattttatcTTCTATCAA
ATTTTAGGATGTGGTCTTCAAATACAATTGgttgaattgaaaaatctttg
gACCATGTGGATTACATTCGAGTGTATTTTAATAGTATGGTGGTAAAATG
CATGGTTGTTTTGGATTGGAATGGCAGGAATAACGAATGTTTTGGTTGAC
ACACATAAAAAGAGGAGGGAAAGTATTGGTAGTAAAGTTTTGCCTTATGT
ATACTAATCCAAGTCTTCGATATATAACATAGTATATCTCTTTATTTTTA
AAGGTATAATGTGAttagtttttatgtttttgaatcatgaaacaattttg
atttgatttagtGATGTAGCTATTGTTTTGTTGTACATATTGATGATTAc
ttattattaaaaaatgtttacgaaatcaaaaatcacaaaagtgacaaaaa
ttataattttattggcAAAGGTGTATATCCCTTTTCATTTTAATAAGTGT
TCAAATACAAAGAAGATTTTTGTTGAGGGCCACTTTATATAATTGTTTTA
CAAGATCAGTCAGAGCTTATCATATTAATGACATACATGTATTTTctctt
ataagcataacgtttataagcatatacaggctcagtttttggtaacCTAA
ACAatagctctattgtttgagaacgatagaatactaagcataatacaagc
ctgatataggggtagacacttgcttataaagaaaGAAACATGTAATACGT
CGTGAGACTCATTCTCAAtcaattaatgaaattttttatcttatggctca
aatttaatttatctgaAGACTCAGGGCTTCGACTTGTATACGTTTTGAGA
ATTTATAACTTTTACGAAATGCTGAAAAAAGAAGTAAGGTTCGTGAAATT
AAGTGTTCGTATTTTGAATAATAATGTTTCGATGTTTAGAAGATTTAATG
TTTGtgtgtatttaaaaaataagaatatctttatcagaaaaaacaacttt
ttttgttGGTTTTATCAACATAATTTGTAAATAATGTTTGGTTCCTTTTA
AGTTTCTTTTGTCTTGTAAAATTGTcaacctttttttttctttcgatcta
taatttattgaaaattttattttaccatTTATCACCCAATCCTGAAAATC
TGAAAACCCTCGGCAATGACACAATATTAAGTCTGAatatcttctgacat
tacatcacagacccaatagctgattggttgtgaGTGACGTAAAGTcggtc
aatacgtcactttcaaccaatcagctgttggaagATATCGAGGTTTTGTC
TAAAATTTCGTCATTACCTGGTCTAGGAACTTTGGATGGGAACTGAATGA
AgcttatttttaagaattttctcTTTCTATAGAAACGAAAGTGTTTTTAA
GCTTTTCATTATTCAATAATCCATTCAAGTTTCTAAGTCTCATCCTTTTT
GTGTCACACAGTTTGATTGACCTTTCATATGAATGCCTGTCATACTCGTG
ACATTACCTCAAAACAGCTGGAAGAAACGATTGATTATGTCTAAATTATT
TGACCCTTTCCCTAGTTTTTGACCTTCAACTCCCCCCTGGTTTAGTTTAG
TATATTTATGATTTTAATGTAATGTAAATATGACTAGCCTCTATCACCAT
TTTATTATtgtaaaaatatcttttttttatcttgtaattttttttgctca
ttttttttgttcacttGTTTTATGTCTTAATGGTTTTTATTTGCAATAAG
AAAAAGTTCTTTTGTGCTTAAGAATAATCATGTAAATTGTATGGGCTACT
TGCATCAATACTTCTTAAAGCTTCCAAAATATCTTTTTGTCCTTGATAAT
TAGGTGGGTGAATCATGTATGTAACGTCACTGGGCAGAAACTTTCCTTTA
ATGTTCtgtaataaaattttacaaGACTTCAGCAATCATAACTAAGAGAC
TTAAATATTCAAtcgtagaattttttttcaagacttttatATATAGACAT
TGAACCCACAAGTTACCGACTATACTAGCCGGTCGACTCCTgtctgaaat
ttttctttttgatgatgCTGAGTCTAGTGAATCAGACTGGAAGCACTCGA
CGAAGGCTACTTTTCGAAGGATTTCACCAAAAATTCTagatattaaaaaa
atgaacttttgagtttgtaaaatatGATTTAGATAAGAAAAAT Coding sequence (CDS) from alignment at scaffold_362:83261..91603+ >TCONS_00062155 ID=TCONS_00062155|Name=TCONS_00062155|organism=Clytia hemisphaerica|type=CDS|length=2904bp|location=Sequence derived from alignment at scaffold_362:83261..91603+ (Clytia hemisphaerica)
atgaagCTACTTCAAAATTCAACATTTGAATCACTGAGTTCAGCTCTCTC
AGTTCAAggagataatattaatatttGTGGCagtctGGAGAGTTATTCTT
GCAAAATGACTGGCAACGACAAGAAGCTATACAAAGAGCTGAATATGTAT
GGTAAAAGCCCTGCAGACTTACAAGCCTTATCGCCATCTGAATCTCAAAT
GGAGCAGTTACATGGAATTTCACCGAACTCTCTGTATCTACCACCGATGC
ATCGTATACCAAGCACAGATGAAAGTGACATATCCAATGTATCCGTCATG
AATCGCAAAATGCTGTTCACTTTAATTTCAACActaaacgcttcatttcc
cgaTTACGACTTCAGTTCAGTAAAATCAGAAGCATTCAGTCGAGAAGGAG
ACCTAACTTGGATTGTGAATAATATCAACAGTAACCTGTCAACCTCAATG
GGAGAAGATTTTGTCAAATTAAGTCCAAATTTATGGAAAGCCATTGATGA
TGAGATTTGTCTCTCAGATTGTGAAATATTTAGTTACAATCCAGACATGG
AGTCTGATCCATTTGGAGAAGCTGGATGTCTGTGGTCATTCAATTATTTC
TTCTTCAACAAAGAACTGAAAAGGATTCTCTTCTTCAAATGCAACGGCTC
AAGTCTGTTAGCGGAGTCATCCTCagaatttgaccaatttgtcATGGATC
CTATGGACTGTGAAATGGTAAACTGAatgaagCTACTTCAAAATTCAACA
TTTGAATCACTGAGTTCAGCTCTCTCAGTTCAAggagataatattaatat
ttGTGGCagtctGGAGAGTTATTCTTGCAAAATGACTGGCAACGACAAGA
AGCTATACAAAGAGCTGAATATGTATGGTAAAAGCCCTGCAGACTTACAA
GCCTTATCGCCATCTGAATCTCAAATGGAGCAGTTACATGGAATTTCACC
GAACTCTCTGTATCTACCACCGATGCATCGTATACCAAGCACAGATGAAA
GTGACATATCCAATGTATCCGTCATGAATCGCAAAATGCTGTTCACTTTA
ATTTCAACActaaacgcttcatttcccgaTTACGACTTCAGTTCAGTAAA
ATCAGAAGCATTCAGTCGAGAAGGAGACCTAACTTGGATTGTGAATAATA
TCAACAGTAACCTGTCAACCTCAATGGGAGAAGATTTTGTCAAATTAAGT
CCAAATTTATGGAAAGCCATTGATGATGAGATTTGTCTCTCAGATTGTGA
AATATTTAGTTACAATCCAGACATGGAGTCTGATCCATTTGGAGAAGCTG
GATGTCTGTGGTCATTCAATTATTTCTTCTTCAACAAAGAACTGAAAAGG
ATTCTCTTCTTCAAATGCAACGGCTCAAGTCTGTTAGCGGAGTCATCCTC
agaatttgaccaatttgtcATGGATCCTATGGACTGTGAAATGGTAAACT
GAatgaagCTACTTCAAAATTCAACATTTGAATCACTGAGTTCAGCTCTC
TCAGTTCAAggagataatattaatatttGTGGCagtctGGAGAGTTATTC
TTGCAAAATGACTGGCAACGACAAGAAGCTATACAAAGAGCTGAATATGT
ATGGTAAAAGCCCTGCAGACTTACAAGCCTTATCGCCATCTGAATCTCAA
ATGGAGCAGTTACATGGAATTTCACCGAACTCTCTGTATCTACCACCGAT
GCATCGTATACCAAGCACAGATGAAAGTGACATATCCAATGTATCCGTCA
TGAATCGCAAAATGCTGTTCACTTTAATTTCAACActaaacgcttcattt
cccgaTTACGACTTCAGTTCAGTAAAATCAGAAGCATTCAGTCGAGAAGG
AGACCTAACTTGGATTGTGAATAATATCAACAGTAACCTGTCAACCTCAA
TGGGAGAAGATTTTGTCAAATTAAGTCCAAATTTATGGAAAGCCATTGAT
GATGAGATTTGTCTCTCAGATTGTGAAATATTTAGTTACAATCCAGACAT
GGAGTCTGATCCATTTGGAGAAGCTGGATGTCTGTGGTCATTCAATTATT
TCTTCTTCAACAAAGAACTGAAAAGGATTCTCTTCTTCAAATGCAACGGC
TCAAGTCTGTTAGCGGAGTCATCCTCagaatttgaccaatttgtcATGGA
TCCTATGGACTGTGAAATGGTAAACTGAatgaagCTACTTCAAAATTCAA
CATTTGAATCACTGAGTTCAGCTCTCTCAGTTCAAggagataatattaat
atttGTGGCagtctGGAGAGTTATTCTTGCAAAATGACTGGCAACGACAA
GAAGCTATACAAAGAGCTGAATATGTATGGTAAAAGCCCTGCAGACTTAC
AAGCCTTATCGCCATCTGAATCTCAAATGGAGCAGTTACATGGAATTTCA
CCGAACTCTCTGTATCTACCACCGATGCATCGTATACCAAGCACAGATGA
AAGTGACATATCCAATGTATCCGTCATGAATCGCAAAATGCTGTTCACTT
TAATTTCAACActaaacgcttcatttcccgaTTACGACTTCAGTTCAGTA
AAATCAGAAGCATTCAGTCGAGAAGGAGACCTAACTTGGATTGTGAATAA
TATCAACAGTAACCTGTCAACCTCAATGGGAGAAGATTTTGTCAAATTAA
GTCCAAATTTATGGAAAGCCATTGATGATGAGATTTGTCTCTCAGATTGT
GAAATATTTAGTTACAATCCAGACATGGAGTCTGATCCATTTGGAGAAGC
TGGATGTCTGTGGTCATTCAATTATTTCTTCTTCAACAAAGAACTGAAAA
GGATTCTCTTCTTCAAATGCAACGGCTCAAGTCTGTTAGCGGAGTCATCC
TCagaatttgaccaatttgtcATGGATCCTATGGACTGTGAAATGGTAAA
CTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00062155-exon-scaffold_362-1491911889:83261..83792 | TCONS_00062155-exon-scaffold_362-1491911889:83261..83792 | Clytia hemisphaerica | exon |
| TCONS_00062155-exon-scaffold_362-1510915933:83261..83792 | TCONS_00062155-exon-scaffold_362-1510915933:83261..83792 | Clytia hemisphaerica | exon |
| TCONS_00062155-exon-scaffold_362-1575043694:83261..83792 | TCONS_00062155-exon-scaffold_362-1575043694:83261..83792 | Clytia hemisphaerica | exon |
| TCONS_00062155-exon-scaffold_362-1491911889:87148..87597 | TCONS_00062155-exon-scaffold_362-1491911889:87148..87597 | Clytia hemisphaerica | exon |
| TCONS_00062155-exon-scaffold_362-1510915933:87148..87597 | TCONS_00062155-exon-scaffold_362-1510915933:87148..87597 | Clytia hemisphaerica | exon |
| TCONS_00062155-exon-scaffold_362-1575043694:87148..87597 | TCONS_00062155-exon-scaffold_362-1575043694:87148..87597 | Clytia hemisphaerica | exon |
| TCONS_00062155-exon-scaffold_362-1491911889:87799..87918 | TCONS_00062155-exon-scaffold_362-1491911889:87799..87918 | Clytia hemisphaerica | exon |
| TCONS_00062155-exon-scaffold_362-1510915933:87799..87918 | TCONS_00062155-exon-scaffold_362-1510915933:87799..87918 | Clytia hemisphaerica | exon |
| TCONS_00062155-exon-scaffold_362-1575043694:87799..87918 | TCONS_00062155-exon-scaffold_362-1575043694:87799..87918 | Clytia hemisphaerica | exon |
| TCONS_00062155-exon-scaffold_362-1491911889:89010..89083 | TCONS_00062155-exon-scaffold_362-1491911889:89010..89083 | Clytia hemisphaerica | exon |
| TCONS_00062155-exon-scaffold_362-1510915933:89010..89083 | TCONS_00062155-exon-scaffold_362-1510915933:89010..89083 | Clytia hemisphaerica | exon |
| TCONS_00062155-exon-scaffold_362-1575043694:89010..89083 | TCONS_00062155-exon-scaffold_362-1575043694:89010..89083 | Clytia hemisphaerica | exon |
| TCONS_00062155-exon-scaffold_362-1491911889:89468..91603 | TCONS_00062155-exon-scaffold_362-1491911889:89468..91603 | Clytia hemisphaerica | exon |
| TCONS_00062155-exon-scaffold_362-1510915933:89468..91603 | TCONS_00062155-exon-scaffold_362-1510915933:89468..91603 | Clytia hemisphaerica | exon |
| TCONS_00062155-exon-scaffold_362-1575043694:89468..91603 | TCONS_00062155-exon-scaffold_362-1575043694:89468..91603 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_362 | supercontig | scaffold_362:83261..91603 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR015257 | Maf1 |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0016480 | negative regulation of transcription from RNA polymerase III promoter |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0016480 |
negative regulation of transcription from RNA polymerase III promoter |
Blast
BLAST of TCONS_00062155 vs. Swiss-Prot (Human)
Match: MAF1 (Repressor of RNA polymerase III transcription MAF1 homolog OS=Homo sapiens GN=MAF1 PE=1 SV=2) HSP 1 Score: 217.624 bits (553), Expect = 2.305e-63 Identity = 110/216 (50.93%), Postives = 152/216 (70.37%), Query Frame = 3
Query: 450 MKLLQNSTFESLSSALSVQGDNINICGSLESYSCKMTGNDKKLYKELNMYGKSPADLQALSPSESQMEQLHGISPNSLYLPPMHRIPSTDESDISNVSVMNRKMLFTLISTLNASF-PDYDFSSVKSEAFSREGDLTWIVNNINSNLSTSMGEDFVKLSPNLWKAIDDEICLSDCEIFSYNPDMESDPFGEAGCLWSFNYFFFNKELKRILFFKCN 1094
MKLL+NS+FE+++S L+V+ + +I G +ESYSCKM G+DK ++K+ G+ P L+ALSP Q G+SP+ L +E +S+ +RK LF LI+TLN SF PDYDFS+ +S FSRE L+W+VN +N +L +++ EDF L P LW A+D+EICL++C+I+SYNPD++SDPFGE G LWSFNYFF+NK LKRI+FF C
Sbjct: 1 MKLLENSSFEAINSQLTVETGDAHIIGRIESYSCKMAGDDKHMFKQFCQEGQ-PHVLEALSPP-----QTSGLSPSRL----SKSQGGEEEGPLSDK--CSRKTLFYLIATLNESFRPDYDFSTARSHEFSREPSLSWVVNAVNCSLFSAVREDFKDLKPQLWNAVDEEICLAECDIYSYNPDLDSDPFGEDGSLWSFNYFFYNKRLKRIVFFSCR 204
The following BLAST results are available for this feature:
|
