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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00062431 ID=TCONS_00062431|Name=TCONS_00062431|organism=Clytia hemisphaerica|type=transcript|length=1583bp ATTTTAATCAAAAACTCTTTCTTCGCTCTGCAGACTGGTTTGATTGAGAT GCTCTGCTCGATGTTTGCAGCATGAATATTTTGTTACGGCCAACATTTAT GTTTTGGTATGGCTTCACTATGTTGAGGATTGTAGGATCCTTACACCTCA CTGGACcagcttttcaaaatgttcattTCAATCGACATGCAGGACCATCC AATCAGAAGTCAATATCTaaTGACACCAGTCAACAGATTGTTATCAAAGC CTTTCCAGAACAAAGTGGATATTTTACCGAAAGAAACACTCGACGGAAAT TGAGAGAAGAACGATCGGATTCTCAAAGTGAAATCGAAAATCTGCGCAAA GAgaagaaacaaatgaaaaaggaaatgaatgaaaaagaacTCGAAACGGA AGAAGTTGTGAGATCCATGCAAAAGAGAATCGACCAACTCACCAAAGAGC TGGAAGAACAAAATGCCAATAATCGTTTCATCTCCACCACAGTAGAAACA AAGAAGAAAGCAAAAGATCCGGCAGCCGAAGAATATTCTTACGAAGATGA CTTTGAAGAAGAATCAATCGCTTCGTCAGTTTGTGAAAGTGAAAAGGGAG AGCCATCTTTTGTGGAAGAAGTCGCTTCTATTTCTTCTCCTTCTGTTGCT ACTAGCAACAAGTATGATGACGACACGTTCGAAGATGCTAGCTTTGCTGA AAGCGACAAATTGGACGCTGACCAAGGTGAAATTTGTGAAGAATCCGTCG CTGAAATCGAATCCGATGATGAGTCCCGAAAATCCGATGATGAATCCCGA AAATCCGATCTCTTTTTCGGGGATAAGAACAACAgcaaatttggaaacat tagcTTTGGAGTTCCGCAAGTTTCAAATGTTGAGGAAGTGATTATCAAAA CACCCGTTGCACAAACTAAAACACCCGTTGCTCGATTTGAAGCGCCTGTT GCGCGATTTGAATCTCCTGTTGTTGTTAATGAAATTGTCATCGAGGATGT TCCAACACTTAGAGCAGAGTCACCTCCAAATATGCTGGCAAAGACACCTT CTTCCTTGCTTTTCAACCAAGTCTTGACTTCATCGAGTGATGCACCATCA AATgctagcaaaaaaaacaaatccgGCAAATCCTCAAAAGCAAAACCAAA AACTTCTGACCAGATGAGCGCAGCCGATATCTTCGGTACTGAGAAACCGA AAAAATCTGCAAAGAAGAAAAGCTTTGTTGGTGAATCGATCTCAGCTGCC GATATCTTTGGATCTGCACCCTCATTGAAGCCAAAGAAAGGcaagaaaaa caagaaagttACCAAGAAGAGCAACAATCTCTCTGCTACTGATATCTTTG GCGCTCCACCATCAGCCAAATTGAACAGGAAACAAAGCAAAGAAATGAAC CGAGATATCCATTCTATTCTCGGAGACCTGTAAGAGTAGCATCGAGAGAG ATACACGAGCGAGTCCTAGTTTGCTGAGAGAGATCTTAATCTTGAAAAGT TGTTAGTTATAAGACTTTTGTAAATAATTGTTATAGCTCcgtcaaaatat aaaaaaattcaccatcattaatatttatgtttt Run BLAST on NCBI transcript from alignment at scaffold_364:298625..306386- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00062431 ID=TCONS_00062431|Name=TCONS_00062431|organism=Clytia hemisphaerica|type=transcript|length=7762bp|location=Sequence derived from alignment at scaffold_364:298625..306386- (Clytia hemisphaerica) ATTTTAATCAAAAACTCTTTCTTCGCTCTGCAGACTGGTTTGATTGAGAT
GCTCTGCTCGATGTTTGCAGCATGAATATTTTGTTACGGCCAACATTTAT
GTTTTGGTATGGCTTCACTATGTTGAGGATTGTAGGATCCTTACACCTCA
CTGGTGAGTTGATTAAACTTTTTTATTGCCATTCAGAGCTTATCTTTACC
GTAGCACATATTTTTATAAGAACGTCCAGAAGTCTTCAAATGTTCTTAAT
TTTTCTAATTTTAAGGCGAAAAGACTTTTTAGTGCTAAATATTTTTCACT
ATGTTTTTTGATTGTTTGTGCAATTTTCTAAAAAATCGGGTGTTTCAGTT
TCCGCAAATGCNTATGTTTTTTGATTGTTTGTCTAATTTTCTAAAAAATC
GGGTGTTTTAGTTTTCGCAAATCCTTGATATTTTCTTAATATTTTTGTCT
TCGAAGCTTTCTATTCTTATAAAGATTATTCTTATATATCAAGATAAACG
TGTGGTTTGTGTTGTATCTTGATTAAAACCTTCGGGACTTTAAGAGCTTT
TCAAACGAAATTGTTCTTCTCGAACTGGAAGGAGAGAAGTTTTTATAGAG
ATGATCGTGAATATTAATTTAAGATTGATCTTTTGACGTGTACTTTTTTG
GAAACGAGATTCCATCCGAAATATTCGTAATTTTTCTCAAAAATCTTTGA
GAGCTGAAATAACGACCTTGTCTGTACCCAGTACTTTAATTCGGGAGCTC
TCATTTTATTTTTACTTTGTGTATTTATATAGGACCAGCTTTTCAAAATG
TTCATTTCAATCGACATGCAGGACCATCCAATCAGAAGTCAATATCTGTA
AGTGTTCTTTTGAACAAGTTATCTCATTTGAGCATAGCTATGAATTTCAG
AAAATATCTGAATCAGAAATGATCACAAGACGAACTAAAGATTGCCCAGC
ATTAACCATTTAAGTAGCGATTCCCTTACTTTTCACCTTTTCACATCACA
TCTTTGATTTTTTCGTTTTTCAGAATGACACCAGTCAACAGATTGTTATC
AAAGCCTTTCCAGAACAAAGTGGATATTTTACCGAAAGAAACACTCGACG
GGTATAAACATTATTTATTTTCAACAACTGAACTAAAGTCTGTCCAGATA
TAATTGGCAGTGGAAACAAGAATGCCTGTAACTTTTGATAGTCCAATATA
ATTATGGAAATTTTTTTTTGTTTGTTTTAGAGAATCAAAAGCGCTATATT
TGAATGTATTTTTGGTTGAAAAATTCGCGATTTTAGCGGTTTAATTTGCG
ATTGTAAAAATTGAGCTTTTTTTCTACTTATGCTATAACATTCATTTTTA
CACCAGTGGTAGTTCAACCTTAGGTTAAGAAGNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAATATCAAATCTC
CAACTTATTACTAAAAACGGGGGCTATGTTATCTTTTTTGAACAGTGCAA
TTAAAAGTTGGAAAATGTTAAGTGTTGGTGCATTGTGTTATTGGTATCAT
TGATTATTTCGAAGCGAAGTAAAATCATACAGTATAATTGTTTTTATTGA
AAGGATAAGCATGAACTTATATTGCCTTTGTTATTTTTAAGTCATTAAAG
AACTTTGCTAATTCCCAAAACACTAAACACAGTTTGGCTATGAGGTAATT
AAAGAGATTGTAAAATGTGTTATGATCGAAAAACTGTTTCATCAATCATA
TCACTACCCCCGTTTTTAGTAATAAGTTGGATATTTGATATTTCACAGAA
AAGTGCTACCAAGGGGTATTTCGGGTCCCATATCTTCCGAAGGACTTTTC
TGTTTACCTTGAAATTTAATAAACTTCTTAACCTAAGGTTGAACTACCAC
TGGTGTAAAAATGAACGTTATAGCATAAGTAGAAAAGAAGCTCAATTTTT
CCAATCGCGAATAAAACCGCTAAAAATCGCGAATTTTTCAACCAAAAATA
CATTCAAATATAGCGCTTTTGATTCTCTAAAACAAGCAAAAAAAATTTCC
ATAATTATATTTGACTATCAAAAGTTACAGGCATTCTTGTTTCCACTGCC
AATTATATCTGGATAGACTTTACTTGAACATTTTCTAAAATTTCTTATTA
AGTAATTTTCACGGGAACTAAAATCGTTTTTGGGTGTTTATCGTGAAAAC
ATGGAGGTATAAAGAAAAACAGGAGTTGAAAGTGTCGGTTATTGGTCGTT
CAAGTCTTTTGATTTTTTTTATGAAATGTATCAAAAGAAATTGTAAGCTT
GCCTGATGAAATAAGACTTTTTATTAGAACTCAAGTTTGCTCTGAACATT
CTAACTATCAGTATTGAAGATTCTAGCCTTTTGATATACGAAAATTAAAT
AAAACTTCGTCCACGAAACAAGTTTATGTTCCATTTCGTTATCCGTTCAA
TTTTATTTTGAAAATATATTTTCTCAAGCCAGAAAATGAAAAGTTCTTTA
TAAGCACACACTCAACTTGTAGACATAAAGTCGCTGGAGAATTTTGGAGG
AAAGTATCAAGCAATAGAGTTCACCTTAAAGAAAACATTGATCGAAAAAT
CTTATTATTTGACGAGGGATTGCCAAGTTTACAGGCCTTTTATTTTGTCC
AAATATTTTATTACACTGATGTCAGAAACAATGAATCTCGTCTCATATAA
TTTCTAAAGCTTAAATGAGCCGATAAGATTTCAGCAATAGATAAAAGAGC
TCATTAAAAATGCACGATATATGAGATTATGAGCATGCATACATCTAGGC
TTCTGTTCATCCTCTAGCGAAAAAAGTTTCTTATAGGAAGTATAGGTCTG
CGAATCAGGCTAGCATACATCGTAACTTTTTTAATCCTAGGGCGAGCTTG
GTTACAATAGCATACTTCTCCTGTTTCTTTATACCTCCATGGTGAAAATT
AGCTCCGCAAAATGCGCCAATTTAGTACCCTCGAACCGCGAAAATAAGTT
CTGCGAAAATTAGTTCCCGTGAAAATTAGTTCCCTTAAGGTAGTTATTGT
TAACCATTTGTTTCATTCAGGTGAAAGCATAAGTTTTTCCCGACAAAAGC
AACGTAGGTAAAGAAAATTTAGATATAAAGTAGTTCAGCTCAGGTTTACG
GAATTTGGCCTAACTGTGCACAACTTTTACACAGTGAATAGTTCTGGGAA
GGTTAAGCGAAGACGGTTGTACGTTTACGGGTCGATAATTCTTATCTGCT
GCTGGCTGGTTCCGCCGTTTAGGACTATAGTCTTGTGGACGCTCGTCACT
GCGTAATCGTAATTATTAGATCCATGCGTCACTTTTTTACGTCAAACATG
TCAAAAAAAAACTGACGTCAAATATAATTTTTTACTTAAATAAAGAAGTG
AAATTTGCGAAGATTTTTATCTTTTTGAAATAGACTACTTTCAGTAAACA
CGTCGTCGTGGTTCTGAAAGATCTTTTGTGAATTTGTTGTCGAATAAGTT
TGCAAAATGTTGAATATAAGTAAAATTATGAATACCGAAGAGGTATTTGA
TGTTCCCGATATCGGGGAAATCGGAATAAAAAATGCAACAGTCGGAAAAC
TCCGTCAAGAATGTCGAGATCTTTTCTTATCTGAGAAGTATGTCAGTTTT
CAGTTGACTGAATGTCAACGAGAAAAAGACACATTGATCAGTGAGGTGGA
TCTGATGGAGAGATTGTTGAAAGAAAGACAAGACAAAAATGAAGAAGAAC
AAACAAGATTGATTGAACGATATGAAAGTCAATTCGAAAAACTTCGTGCT
GAATGCCAACTACTAAAGAACCTTGTAGAACCTTTGGAAAAGCAAATCAA
TGAATTGACGCTTCGCGAAGGACAATTAATTAAACAAATTTCTGATAAAG
AGATTACCAGTGGGCAACAAAAGATGTTGTTGGAATCCACTTATAAAGAA
ATGGAGAAAATCAAAATCAAACTTGCAGGCACCGAACACGAGCTGAAAGA
ACAGAATCAAAAGTGTTTCAACCAGGAGCAAGAGATTTTCGATTTGTCTT
CCAAAATCAAGATGGCTGCTCATCTTCAAGAGCAGCAAGCGGCACAAGCG
TTGAGTGTTGCCAAATCCAAATTCGAAATGGATCTTCAAGAAATGAAATT
ATTATTGATTAACAAGGATGTTTTCATCAAAGAGAAAGAGGGAGAGCTGA
TCAAATTGCAAGCAGCAATGCAGGAGGAGAGCCGTAAGGTGATCCAAATG
ACTGAAGCTGTCAGCAAAAATGAAAAGCTCGATCTTGAGTATCAGAAGAT
GAAGCTCAAATACCGAGAAGTCAAACTGTCCGAGAAAGAAACATCTCAGA
AATTGACGGACGTTAAAAACGAGAATAAGAAGTTATTGAAGAAGTATGAA
GATCTGAAAAACAAGAATGTTTCACTTTCGGCAGAAGATAAGGAAACATT
GCGTTTGACCAGACGAGAGAATTTGGATTTGAAATCAAAACACGCCATCC
AGGAGCAGACACTTCGCCACCAGATTCAGAAGCTTAAAGAGGGAAATAAG
AAGCTGGGAAAGAAAAACGTGAAGTTGGAACGCAAGTTGAGAGATTCTCG
TATGAAGTTAACTTCTTCGGATGAAGAAAATGGAAAATATCGATCGCTGG
AAAAAGAGATCAAGGTTAGAATGAATTTTTGTTCATCAATGTCGATTTTT
TGTGGAAACACTATGAACTGTCTGATCGGTGGTCTGTTATCTTTCTGTGT
TGAGGCGATGTTGATGATATCATCTTCCCTGCATCCATTAGCCATTTCTT
TCACACGTAAAAAAAATCTCAAACTGTTCTTTTCGAAGTATCCACCTTGT
ATGTATGTATGTAATAGTTTATTTCAAGTTGACGAACAGGTAGCAACAAA
GGCTAATAAAAGTCAACGCTACTTTACAATTTGTAAGGTGATTACAAAAG
GCCGACACCGATTTTAAAAGCAGTTACTGCGATAAAAATGTTTTTATCGC
ACTAACTGCTTTTAAGGTGGATACTTCGAAAAGAACAGTTTGAGATTTGA
TGAGAATCAAGAACTTTCCTTGCTAGGTGTCAGACTATAAACGTGTTGAA
AGTATTACTTGTTAAATGCTAAATTTTGCCAAATATTGTATGAAGCTTAT
TATTTTTTCGCTTTTCAGAAATTGAGAGAAGAACGATCGGATTCTCAAAG
TGAAATCGAAAATCTGCGCAAAGAGAAGAAACAAATGAAAAAGGAAATGA
ATGAAAAAGAACTCGAAACGGAAGAAGTTGTGAGATCCATGCAAAAGAGA
ATCGACCAACTCACCAAAGAGCTGGAAGAACAAAATGCCAATAATCGTTT
CATCTCCACCACAGTAGAAACAAAGAAGAAAGCAAAAGATCCGGCAGCCG
AAGAATATTCTTACGAAGATGACTTTGAAGAAGAATCAATCGCTTCGTCA
GTTTGTGAAAGTGAAAAGGGAGAGCCATCTTTTGTGGAAGAAGTCGCTTC
TATTTCTTCTCCTTCTGTTGCTACTAGCAACAAGTATGATGACGACACGT
TCGAAGATGCTAGCTTTGCTGAAAGCGACAAATGTAAGTCGTCGATGAAA
GGCTTGATCTTTTTTTTTCCAGGAATTAATTGTTGATTTTTCAGTAGAAA
GTAAATTGATTTTCGAAATTTTTGGACGATTCTAAACCTGACCAGGTAAA
TGATACAGGGATGTTTTAAAACCTTCGATGTATCAAAATGTGCGAGCTGC
TAGTGTAGTTTTGCTCTACATTATTTTCTTCGTTTACACGCTTTTTTTAT
AAGAATATATTTTATAAGAATGTCCATGATAAAAATGGCCAAAAAATTAA
GAATATGCCACGAATATCACCATCATGGAATTTGGCTACTCAAGCTAAGA
ATGCAATTGGGCTTTTCCAGAAATAGTTCGCCCCCCCCCCTGAGTTGAGG
ATATCAAAACATTTTTCTTTGATCTTTGATCTGAAAGAATGAGATTATGC
AAGAAAGAATAAACCTTTGTATCCCCAACATGTTAAATTAACGGGGGAGT
TCACTAAATCAAAGTGGAAGCATTTCTGACGAACCTTAGTTTCTTTCCCC
AAAGAATAAGTAGTTACACGCTTGTTTTATAAGAATACACTTTATAAGAA
TTTCCATGATGAAAATGGCCAAAAAATTAAGAATAACGCTAAGAATATCA
CCATCATGGAACTTTGCTACTCAAGCTAAGAATACCATTTTTAGAGCATT
TCCAATTATAAATTGTAAATTACCCCAAGTAAGGCTCACTCCTTTCATGA
AAATACCATTTTATACTTGAGACGTATGTTCTAAATGTTAAATCTAGTCT
GAATTTTAGGATCTTAACTTAAGAATGCTGTAAGAATACTTTAGGACGAT
TTTCCCAAAAAGTTAAGAATATCCATGATGAAAAAACAAAAGCGTGTACA
TTAAGAACCCTTTATTTCTCAGTCTACACCATTTTGTAATTTTATTGCTT
TAGTGCTGTTTTTTCATTTGTTGCTTTCTTTTCGTTTCAGTGGACGCTGA
CCAAGGTGAAATTTGTGAAGAATCCGTCGCTGAAATCGAATCCGATGATG
AGTCCCGAAAATCCGATGATGAATCCCGAAAATCCGATCTCTTTTTCGGG
GATAAGAACAACAGCAAATTTGGAAACATTAGCTTTGGAGTTCCGCAAGT
TTCAAATGTTGAGGAAGTGATTATCAAAACACCCGTTGCACAAACTAAAA
CACCCGTTGCTCGATTTGAAGCGCCTGTTGCGCGATTTGAATCTCCTGTT
GTTGTTAATGAAATTGTCATCGAGGATGTTCCAACACTTAGAGCAGAGTC
ACCTCCAAATATGCTGGCAAAGACACCTTCTTCCTTGCTTTTCAACCAAG
TCTTGACTTCATCGAGTGATGCACCATCAAATGCTAGCAAAAAAAACAAA
TCCGGCAAATCCTCAAAAGCAAAACCAAAAACTTCTGACCAGATGAGCGC
AGCCGATATCTTCGGTACTGAGAAACCGAAAAAATCTGCAAAGAAGAAAA
GCTTTGTTGGTGAATCGATCTCAGCTGCCGATATCTTTGGATCTGCACCC
TCATTGAAGCCAAAGAAAGGCAAGAAAAACAAGAAAGTTACCAAGAAGAG
CAACAATCTCTCTGCTACTGATATCTTTGGCGCTCCACCATCAGCCAAAT
TGAACAGGAAACAAAGCAAAGAAATGAACCGAGATATCCATTCTATTCTC
GGAGACCTGTAAGAGTAGCATCGAGAGAGATACACGAGCGAGTCCTAGTT
TGCTGAGAGAGATCTTAATCTTGAAAAGTTGTTAGTTATAAGACTTTTGT
AAATAATTGTTATAGCTCCGTCAAAATATAAAAAAATTCACCATCATTAA
TATTTATGTTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00062431-exon-scaffold_364-1575043694:306234..306386 | TCONS_00062431-exon-scaffold_364-1575043694:306234..306386 | Clytia hemisphaerica | exon |
TCONS_00062431-exon-scaffold_364-1575043694:305540..305604 | TCONS_00062431-exon-scaffold_364-1575043694:305540..305604 | Clytia hemisphaerica | exon |
TCONS_00062431-exon-scaffold_364-1575043694:305286..305363 | TCONS_00062431-exon-scaffold_364-1575043694:305286..305363 | Clytia hemisphaerica | exon |
TCONS_00062431-exon-scaffold_364-1575043694:300454..300868 | TCONS_00062431-exon-scaffold_364-1575043694:300454..300868 | Clytia hemisphaerica | exon |
TCONS_00062431-exon-scaffold_364-1575043694:298625..299496 | TCONS_00062431-exon-scaffold_364-1575043694:298625..299496 | Clytia hemisphaerica | exon |
TCONS_00062431-exon-scaffold_364-1510915933:306234..306386 | TCONS_00062431-exon-scaffold_364-1510915933:306234..306386 | Clytia hemisphaerica | exon |
TCONS_00062431-exon-scaffold_364-1510915933:305540..305604 | TCONS_00062431-exon-scaffold_364-1510915933:305540..305604 | Clytia hemisphaerica | exon |
TCONS_00062431-exon-scaffold_364-1510915933:305286..305363 | TCONS_00062431-exon-scaffold_364-1510915933:305286..305363 | Clytia hemisphaerica | exon |
TCONS_00062431-exon-scaffold_364-1510915933:300454..300868 | TCONS_00062431-exon-scaffold_364-1510915933:300454..300868 | Clytia hemisphaerica | exon |
TCONS_00062431-exon-scaffold_364-1510915933:298625..299496 | TCONS_00062431-exon-scaffold_364-1510915933:298625..299496 | Clytia hemisphaerica | exon |
TCONS_00062431-exon-scaffold_364-1491911889:306234..306386 | TCONS_00062431-exon-scaffold_364-1491911889:306234..306386 | Clytia hemisphaerica | exon |
TCONS_00062431-exon-scaffold_364-1491911889:305540..305604 | TCONS_00062431-exon-scaffold_364-1491911889:305540..305604 | Clytia hemisphaerica | exon |
TCONS_00062431-exon-scaffold_364-1491911889:305286..305363 | TCONS_00062431-exon-scaffold_364-1491911889:305286..305363 | Clytia hemisphaerica | exon |
TCONS_00062431-exon-scaffold_364-1491911889:300454..300868 | TCONS_00062431-exon-scaffold_364-1491911889:300454..300868 | Clytia hemisphaerica | exon |
TCONS_00062431-exon-scaffold_364-1491911889:298625..299496 | TCONS_00062431-exon-scaffold_364-1491911889:298625..299496 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_364 | supercontig | scaffold_364:298625..306386 - |
Blast
The following BLAST results are available for this feature:
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