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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00062649 ID=TCONS_00062649|Name=TCONS_00062649|organism=Clytia hemisphaerica|type=transcript|length=1032bp
TGCGAatcatattgtcgaatattgtcaATTTCTTGTGTATAGTAGTCTCC
TTTGTTTAGATTAGTAACTAGTTCACATTATATATACTTGTgagagaaaa
attgaaagttgaaTGTTGTTGAAAAATTAAGTAACATTTTTCAAGTCTAC
AAAGGCAAAAGCTTACGAGTTGTCTGAAGTTGTTGACCAAGATAATGATA
AAACCGATCATTGTCCTTTTTTGACAGCATGTTGATCATTCTTTTTTCCA
TTGATAATTTTACAAATTGGTGTTCAAATCGTTTGAATGAATAAATCAAC
TCACTTTGGATTCCTAAAATATGGCCCATGGTCATGATTTAGTTTTATAC
ATTTCTTTCCCCCTGTAATTTTGCTCGCGCTGTCCCACAAGAGGAACTTC
ATTTGGCGTGCACCTCAGTTTAATCAAATACCAATTCGGCGTGGACTTTG
CGTCAGCTCCACACTGGCATCTAGCCCTTCGTCgggttttataaatctat
ggttgaCAGAACACATTACAGTATAAGGAATCCCTGCGAGAAATTTATTT
GGAAacctgcaacaaaaacgaaagtggtctttTTACTGATTGTTTCTTGG
TGGCGTTCCTTTAAAGTAGACTGTATATTAATTTCCACATAGATTGCTGC
ATTTCACAAGGCCCTTCTATTCAGCCCCAGTGGCTTCCCCTTCATAACAg
ctcttttatttgttttaatcTGTGATCCTTAAGATGTAGActatttctca
tcttcaattctcTGGAGAAAGCAgaaatttgatgcgagagttagattgtc
atcAAAGTTCCTTAAAAATCatcgaataaaagaagaacttaaaatcttag
atattttcattttgaagaattagtACAAAACAGTGAAACatgaaaaagtt
ttgttttttattgctttaatcgaaatgggggatttggaaagttttctatg
tttggtttttttgcacaaacccctgtaactatgggaaAGCGCACCccaag
atgttggcttgaaatcaaaaatgaaatccTGA Run BLAST on NCBI transcript from alignment at scaffold_370:93773..94804 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00062649 ID=TCONS_00062649|Name=TCONS_00062649|organism=Clytia hemisphaerica|type=transcript|length=1032bp|location=Sequence derived from alignment at scaffold_370:93773..94804 (Clytia hemisphaerica)
TCAggatttcatttttgatttcaagccaacatcttggGGTGCGCTttccc
atagttacaggggtttgtgcaaaaaaaccaaacatagaaaactttccaaa
tcccccatttcgattaaagcaataaaaaacaaaactttttcatGTTTCAC
TGTTTTGTactaattcttcaaaatgaaaatatctaagattttaagttctt
cttttattcgatGATTTTTAAGGAACTTTgatgacaatctaactctcgca
tcaaatttcTGCTTTCTCCAgagaattgaagatgagaaatagTCTACATC
TTAAGGATCACAgattaaaacaaataaaagagcTGTTATGAAGGGGAAGC
CACTGGGGCTGAATAGAAGGGCCTTGTGAAATGCAGCAATCTATGTGGAA
ATTAATATACAGTCTACTTTAAAGGAACGCCACCAAGAAACAATCAGTAA
aaagaccactttcgtttttgttgcaggtTTCCAAATAAATTTCTCGCAGG
GATTCCTTATACTGTAATGTGTTCTGtcaaccatagatttataaaacccG
ACGAAGGGCTAGATGCCAGTGTGGAGCTGACGCAAAGTCCACGCCGAATT
GGTATTTGATTAAACTGAGGTGCACGCCAAATGAAGTTCCTCTTGTGGGA
CAGCGCGAGCAAAATTACAGGGGGAAAGAAATGTATAAAACTAAATCATG
ACCATGGGCCATATTTTAGGAATCCAAAGTGAGTTGATTTATTCATTCAA
ACGATTTGAACACCAATTTGTAAAATTATCAATGGAAAAAAGAATGATCA
ACATGCTGTCAAAAAAGGACAATGATCGGTTTTATCATTATCTTGGTCAA
CAACTTCAGACAACTCGTAAGCTTTTGCCTTTGTAGACTTGAAAAATGTT
ACTTAATTTTTCAACAACAttcaactttcaatttttctctcACAAGTATA
TATAATGTGAACTAGTTACTAATCTAAACAAAGGAGACTACTATACACAA
GAAATtgacaatattcgacaatatgatTCGCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00062649-exon-scaffold_370-1491911889:93773..94804 | TCONS_00062649-exon-scaffold_370-1491911889:93773..94804 | Clytia hemisphaerica | exon |
| TCONS_00062649-exon-scaffold_370-1510915933:93773..94804 | TCONS_00062649-exon-scaffold_370-1510915933:93773..94804 | Clytia hemisphaerica | exon |
| TCONS_00062649-exon-scaffold_370-1575043694:93773..94804 | TCONS_00062649-exon-scaffold_370-1575043694:93773..94804 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_370 | supercontig | scaffold_370:93773..94804 . |
Blast
The following BLAST results are available for this feature:
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