TCONS_00062654 (transcript) - C. hemisphaerica

Overview
NameTCONS_00062654
Unique NameTCONS_00062654
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length175

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00062654 ID=TCONS_00062654|Name=TCONS_00062654|organism=Clytia hemisphaerica|type=transcript|length=175bp
GGAACATCTAAAATCAACATATCACCGTGATTCTTAGATTCCTCAACAAG
CTTTTGCTGGACTTCAGCAGAATCAACAGCTCCTACATTGAATATTACTT
GCCAATTTTCCACACTTTCATTCCAAAATGTTTGGTTGCCCCACGCTTTG
CGGATCCACTGGCGGCGCTCGAAAT
Run BLAST on NCBI

transcript from alignment at scaffold_370:115212..115386

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00062654 ID=TCONS_00062654|Name=TCONS_00062654|organism=Clytia hemisphaerica|type=transcript|length=175bp|location=Sequence derived from alignment at scaffold_370:115212..115386 (Clytia hemisphaerica)
ATTTCGAGCGCCGCCAGTGGATCCGCAAAGCGTGGGGCAACCAAACATTT
TGGAATGAAAGTGTGGAAAATTGGCAAGTAATATTCAATGTAGGAGCTGT
TGATTCTGCTGAAGTCCAGCAAAAGCTTGTTGAGGAATCTAAGAATCACG
GTGATATGTTGATTTTAGATGTTCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039266XLOC_039266Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062654-exon-scaffold_370-1491911889:115212..115386TCONS_00062654-exon-scaffold_370-1491911889:115212..115386Clytia hemisphaericaexon
TCONS_00062654-exon-scaffold_370-1510915933:115212..115386TCONS_00062654-exon-scaffold_370-1510915933:115212..115386Clytia hemisphaericaexon
TCONS_00062654-exon-scaffold_370-1575043694:115212..115386TCONS_00062654-exon-scaffold_370-1575043694:115212..115386Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_370supercontigscaffold_370:115212..115386 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00062654 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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