TCONS_00062686 (transcript) - C. hemisphaerica

Overview
NameTCONS_00062686
Unique NameTCONS_00062686
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3363

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00062686 ID=TCONS_00062686|Name=TCONS_00062686|organism=Clytia hemisphaerica|type=transcript|length=3363bp
TTTTACATCATTTGCCAACCTAAAAAGTAGTGCTCTGTGTACGAGATTGC
CTCTTTCAAATTTATGTCATCGAAGTTTAAACACAGCTTACCACAAGCAA
AGCAAAATTCATATACATAGAGATACATTATTACAACCTTTCCTATACAT
AATTAATTGAATTTTATTAAAGATACGAAACTATAAATAGCGGTGACTAC
TTTCTATTAAATTAAAGCCTTTCTTCTGACATAGTCCGAGAGAGTCGCAA
GGaagggaatttttttcaaaaattcagatttttagTTGTGCTCCATCAAA
GTCATCAATAATTGGAACAGGAACAgGTACATTCTCAAAAAATGAAGCTG
ATATTCTTGGCTGTATCACTTATAGTGGTTACACTTGATGCTTTACCAAA
ACACGGCGTCTTTCGACCCCCGACGGAAATTGAAGTCAACGAGAAATTTT
ATCATCGACATGGAGATATTGAGCGAATCCAACATAATGATGTGTCCAAC
TTCAAACGCCTTGCAAAGAAATTGAAACACATCATTGGAGAGACGAAAGT
GTTGAAACGAGTACTTGATACAAGGAAGAAATTTGGTCACTTGAAAAGCG
TAGCTGACGTCAACTACCATAGATACGGCCGAAAGAACGATATAATAGAA
AGTGAAAATCGTAAACGAAACAGCGTCAAAATCAACCTTTGGAATCCAAC
ACAACCCGGAGAACGATTAGTCATACCATACTCTTTCAGATCTGACTATC
CAAATAGACTTCGACCATACGTTGAGAAAGCCATAAAATCCATGAATCAA
CATTTGAGATGTGGTTACGATGTTTGGGTACCTTACAGTAACCAAGCTCA
TCGTGTTGAGTTTATCAAGGATGGAGGTTGTTACAGTTTATTGGGCAAAG
ACACCAGTGAAGGGAATAAACAACCAATCAGTATCGATGATGGATGCGAA
GCAAAACATATTGTTTTGCACGAAATGATGCATGCAATGGGATTCTATCA
TGAACAGAATCGCTTCGATCGTGATCAATTCATCAAAATCAACTGGAACA
ATATTCAAGACGGTATGGCAAGTCAGTTCGACAAAGCATCAAATAACAAC
ATCTTCCAAACTAGCGTGCCATATGATTACATGAGTGTTATGCACTACTC
TTTGTCATCATTctctaaaaatggtcaaaacacCATGACGATCTTGAAAA
ATGCTCAGAGTGCAAAGTTAACGGCACAGGACTTACGAATCCTTGGAGAC
GTTCCCGATTTATCTGCAGAGGATTTACAAGAAGTTAGAGCTTATTTCAA
CTGTAATTCTGCCGGTGGCCGAACAACAGCACGACCAGCACCACGAACAA
CAGCACGACCAGCGCCACGAACAACCCGAAGACCTGCAACGAATCGTCCA
CGAACAACCCGAGGAACAACAGAAACAGGAGGTGAAGCTACATGGTCATG
GGTATCTGACGGATCAACAGAATCATATGGTACTGATGCTACAGAATCAT
ATGGCACAGAATCATATGGTACGGAGGCTACAGAAATTTATGGTACAGAG
GCTACAGACATTTATGGTACTGAGGGTACAGAATTTTATTGAGGCTCTCA
AGGTCCAGAACTTGTCTGGAGCTGATAATGGAGCTGATGATGACGCTATA
TACTCAATGCTCTAAAGAATATTTCATATAAAGATATCTTTCAAAGTAGG
GAACAATGGATTTGATGGTTAAAATCTATATATTGCTATTTACTAATTTG
AGATATAGATCTtatatgaattatttttcaagccgaaaatattttcaagt
tgTATTTCTATAGTTTTATATCGATCTATTTATTCGCTAATTTACGTAAA
CtttttttgtaacctttttttACATGTaacatttcgaaatttatttcttt
tgatatttacATATTCAAACTCAGATTCACTTTCAAACCATTTTACGAAT
AGACCTTGGAAAAGTCCTCTTTTAAAAAACCAAGAAAATATGCAAAGTAA
ATATGTCTGTGGCCCAAAAGCTTCTCATTGATAGCTAACTGATGGTAGGG
GAGGGCACTACTTTTCTGGTGTGAGCAAAAGCATCATCAGacaaattagt
tcccgcaaaaaatagTTTATTTAAGGTAAAACATTTTACTCTTgctcttt
ttttctcttcaaaatGGAAATTGATAACATTTGAAGGTTCTTTTTCAAAG
TGTTTATTCTTAGATTCGTTTCtttattcaaaacattttaatcAATCTGA
CAAATCGATAAGCTCGAACTCTCCAACAGTAGTTTCAGCTTTCGTGGTTT
CTCCGAAAGTGATAGAACGAGTTTTTGGTTGGTTTTGTTTAGCTGCTGCT
TTTCTTTGTCGTGCCGACCGTCTTCGGCTAGCCGACCTTTTTCGTTTTGC
CGATGTTGATCGTTTTCGGGAAGAAGATCTCTTACGGGAGGCAGAACGTT
TTCGTTTTGCCGAGGCTGATCGTTTTCGTGTCGGTATAGCCGACTTTTGT
CGTCTAGCACGTCGCTTTTTGGAAACCGATCTTTTTGGTGTGCAGTATAT
TTCTTGAGGAACGTCGGTGGGTGGGGTCGATGGTTTTGCCGACACAAGAC
GTTTTCGAGAAGTGGACTTTTTTCTCGAGGCTGACCTCTTTCGGGATCCT
GATCTTTTCTGGGAGTTTAATTTCTTTGAAGAAGGTGTTGATTGACTTTC
CGTTAAAGTTTGAACCAACTTTTTCGTTTCTTGGTTTGTTTGCTTATTAA
CAACAGCCGCCGACTGGCTTCGTTTAGCAGAACGAGAACGTTTTCGTCTT
ACCGAATGACTTCTGCGTACCGATGGTGATCGTTGTCGTGCAATACTCGG
TGAACTCTTTCTTCCATAAGTTCTACGTCGACGATTCGATCCCGATCGTT
TTCGAGATGCCGAACGTTTTTGGGACACTGCTCTCGGGCTTTGTGAACGA
GCACGTTGACGTGAGATTGAGCGCTGGTTACGTGAGCGGGATCGTTGTTT
ACGAGACATGGGACTACGTCTTCGTGATAAAGATCGTAACCTACGACCTG
GAGATCGTCCGCGTCGTCCTAAAGATTAAGAATAAGAACTTTGTTTAGTT
TTATGGTGGAAGATGATCAACTATACTATTATGTATTTGGCATGCATTAA
CATTACAATGTTTTCAACATCTTCAACATAAGTTTTATACTTACTTAATG
CTCTACTTCTGGTTCGCATCTTGAAAAATGTTGCtgacaaagaaagaaaa
agtcgGTGCTTTGTGCTTGTGTATGTACTAGATAACCGGTGGTGTTTACT
TGGTTGAGAATACAGTTGTTAGAAAGTATTGCACAAAGTTACTTGAACTC
TACTTAattaaat
Run BLAST on NCBI

transcript from alignment at scaffold_371:428710..442512+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00062686 ID=TCONS_00062686|Name=TCONS_00062686|organism=Clytia hemisphaerica|type=transcript|length=13803bp|location=Sequence derived from alignment at scaffold_371:428710..442512+ (Clytia hemisphaerica)
TTTTACATCATTTGCCAACCTAAAAAGTAGTGCTCTGTGTACGAGATTGC
CTCTTTCAAATTTATGTCATCGAAGTTTAAACACAGCTTACCACAAGCAA
AGCAAAATTCATATACATAGAGATACATTATTACAACCTTTCCTATACAT
AATTAATTGAATTTTATTAAAGATACGAAACTATAAATAGCGGTGACTAC
TTTCTATTAAATTAAAGCCTTTCTTCTGACATAGTCCGAGAGAGTCGCAA
GGaagggaatttttttcaaaaattcagatttttagTTGTGCTCCATCAAA
GTCATCAATAATTGGAACAGGAACAggtacaaaaaaaattttatttagtt
ttatACACCCCTGGTTCAGTGACGTTTTGGAGGGTTTCGCGGCAGATAGG
GAAATCCAGGGAAATCCCCACAGCAAGgatgaattttttatcaaattccc
AATTGTGATAGAAATTCAACCTAAAAANGACAGGCGAGCAATTATCTAGT
CTACGTCTGTTTTtcttgttaaaatatctttaaaaacaCCGCAAATTTTA
GTCGCTTTTGATCCTTAATCATGGAGTCCCTTCTTATtacaaaattccaa
aattagTACAAACTTAACATTTTGtatcaacaaaataaaacaataatttt
taCATCATTTGCCAACCTAAAAAGTAGTGCTCTGTGTACGAGATTGCCTC
TTTCAAATTTATGTCATCGAAGTTTAAACACAGCTTACTACAAGCAAAGC
AAAATTCATATACATAGAGATACATTATTACAACCTTTCCTATACATAAT
TAATTGAATTTTATTAAAGATACGAAACTATAAATAGCGGTGACTACTTT
CTATTAAATTAAAGCCTTTCTTCTGACATAGTCCGAGAGAGTCGCAAGGa
agggaatttttttcaaaaattcagatttttagTTGTGCTCCATCAAAGTC
ATCAATAATTGGAACAGGAACAggtacaaaaaaaattttatttagtttta
tACACCCCTGGTTCAGTGACGTTTTGGAGGGTTTCGCGGCAGATAGGGAA
ATCCAGGGAAATCCCCACAGCAAGgatgaattttttatcaaattcccAAT
TGTGATAGAAATTCAACCTAAAAATACAATGCGGATGGTTTAAGTGAGCA
ATTTTTGCATTGAACTTTAAATGGGGTGGACAATTGGGCTGAAATTGCAT
TTaattagggtatttttcccactggGGATGAAACTTTGACTAAATTTCCC
AGAGGGTGGGGTCCTGCCATGTATGTGACACATGTCTGTTTATACTTGGT
ACTCGTACCAGGCTTATCTTGCATCTATatggcaatgaattttaaaatat
cATTATGTCATTATAAATAGGACACTGACTTACCTCGTTATTTTCCAATT
CAATTCTTTTCTATCATCTAGGTACATTCTCAAAAAATGAAGCTGATATT
CTTGGCTGTATCACTTATAGTGGTTACACTTGATGCTTTACCAAAACACG
GTATGATATTTTTTTAGTATCTGTTGACTAATCTGggtttaactaaggct
ccagtacagcgctaTAAGACCTTTTGATAGACTGGGTGATTAGTAACTTA
AGTGGACTCAGCGtcatgaaaaattataaattttcattaattttgcggat
ttgggGGCGCCATGCGCGAAATTAAGTCTcgatggaaatttggaaagtcC
TTATCCACGAAGAATGTTTAAGCTAAACTCAAAACTTGTAAATTTATAGT
AAATTCATACTTGCCTTTACCAACTCTTAGCCTTCTAGTCTCTATCTAGT
TACAACCGGTCTCAGTATTTTTAATGAACATCATATTTTTTATACGCTAC
ATATATATTTATCATACTCAATATCCAGGTGAAGAGCCAATTGTAAAACT
Ttggatatacacgtttttttttttaagaaactagttttaccaagcaggct
caatgtttcttaagaaatcggccttttgagccttaaatgtttcttacatg
tttctaaactttgtcaagcttaaaggacgcatttcgataatacaatagtc
taattgactacacgcttctttttttttataagaatacactttataagaat
gtccatgatgaaaatggccaaaaaactaagaatatgctaagaatatcacc
atcatggaattttgctactNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
taaattatcaattatccccaagttaggctcactccttttacaaaagtgcc
attttatgcttgagacgtatgtactaaatgttaaatctagtatgaataAG
GATGAATgaatgtgctgtaagaatattttaggatgattttcccaaaaaag
ttaagaatattaatgatgaaatggatttacaccattcttataaaaaaaaa
aaagcgtgtaatctacggtactttcctatcttctatattgattttctgac
tttctcaagtgtttctaactgttatgtatgtatatttctggaaccttgat
tgaaaggttcttaaaaaaaACGAgttaaaaatgctattttctcattctca
gcctcagcatgtttcttagatgtttcttagtttttaggcattctgagcct
catgtttcttaaaagtgtgtttcttaaaaaaaaaacgtgtactgtgaAAT
ATatcgttattattattattatttgagaTATATTTTGATGTTTCGATAAT
GcactattttttatttatgaaaGTTTTCCTTCTATCGAAGATAGATTAGG
TACACTTTTTCTATTGAAATATTAgaacaagaaataaaaaataagaaaaa
ttgaatattaagTCTCGATGGAATATCTTAGTAAACGATTTTGTAAATAT
CTTAATAAGAGAGATACACCTTTACTTAccgagaaatttttcaaagtctt
gCAAAACTATCATTTTGCGTGTCCTTTTCTTATTTAAAGAgccaaaatga
agaaatttagGTTTAATACCctatttttactattttgacccttaatttga
ataaaaatttactCAGTATTGTTCttagattgttcttatttttgtgcctt
gttgttcttataaaatcattcttataaaaaaggctaTATTTTACTAAATT
AGTTTTTAAATCACAGCAGAACCAGTGAGTAATCCTCCGTTTTATGCTGG
ATACttccagggatatgttatagcgtagctggataacgcacatttgaaaa
agccttgtcctatctctgtccctgacattaaaatttgatatgaaattaaa
cttttttaattacaaattcgtgaaatttggatttctttttagccaatgat
tctgctgctgcattNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNacatccgaaatttttaaagagaaa
ccatgaaagcttctcaaattcataacacacgctgataaaattagatttca
tttacaaagaagcttttggggtatctttttcaaatattattttgatgaaa
agcgggaacatcatagcaaaatatatgcaaacgtactgcatgaatacttt
gtctgcttaatttttcttataaaaacagagcACTttaggggacagagatg
gatttttattatgaacagtttacaatagaaaagacaaaggagcaatccgc
taaggaattctcgtccttcatccagctacgctataacatatccctgatac
ttctaaactttgatgaaaatcaaaacGCGACTTAAAACGCCTAATTTATA
CTTCATCTCATCTTCGGCCAGACATTTGTTTATACACTTTAAAGGGCGGT
TTAACAAGACCCTTTTTAGACTATGACTTTTTTCCATTGTTCAGCGATAT
TGCAATCTTTTTTCCAGGCGTCTTTCGACCCCCGACGGAAATTGAAGTCA
ACGAGAAATTTTATCGTAAGTGATAGTACGCATACTTTACACAATGTTTT
ATAAAAAGGTCATACCCATTTCTTAACCATTTAAGTACCAACCcttcctg
taatgcccagtttgagttagaaatcgtcattcttggtcgtaggaattgga
ttgggtttcatggtcaagcaaaaaaaaaatcaaaagtaaaaaagactttt
ccaatgagaaaaaagaaagtaagaaaaatgcaaagatttgacaaaaatcc
acttttttaagattttgaccgtttttgaccattttcggTCAACGAGtaat
ccaagaacctccaaaattAGCCCTGCtgtacttgattctgtcctctagcg
aattaatttgaatttttactaCTGGGCTCCTTtttatcattcaggcaggt
ccacCTAAATCTCTtaagctatccaacggactATAAACGAGCTACAAACT
CCTTCTAGCTCCGGAGacataagcctttaaagtttgaactagcaattttc
tttgaaaaatgaccgtggtacttaaagggttaagctGTTAAATTCTTTCT
TGATTTAAGTCCACTCAGCCTTTTTCCTTGACACATTTTTTAAACTGAAT
GATCACGAAATACTATATGATTTATGCTGATATATCCAACTATATCTTAA
TCTTAATCTATCTTAATCTTCTAAACAGgccttttatttaatttttctgt
tTACTTTAGATCGACATGGAGATATTGAGCGAATCCAACATAATGATGGT
AAGACTTTATTCCGGGAGGTTTACGATTTTATTGCAGCCGTTGCAGCTTG
GCCTAATTAAGCCCTATTTACATTCTGATTTAGAAGTTGATCAAATTATC
TTGGTAACCATGGCTTTGTATACATCTTTAGACATGCCCAGTATTGTCCA
CATAATCAATAGTTGACTTAAACTATGATTTGAAACTGGACTTCATGGCG
TCTCCGTCCCAATCTTCGATCGAAATTAATCTATAGTATTAGGTCTTTTT
ATGACTCCTTTTAACCACTATCCTAATTTCCTATTCTTCTTTCTCTCCAA
ACTGTAGTGTCCAACTTCAAACGCCTTGCAAAGAAATTGAAACACATCAT
TGGAGAGACGAAAGTGTTGAAACGAGTACTTGATACAAGGAAGAAATTTG
GTACGTTTCAAAGCTTAACCCGCTTTTTATCAGGGGAGGGGTGATTTCCA
CCACCTTGGTGGTTGGTGGTTTTTTGTTAATAGctcacagaaaaaaactt
tttttgacactgaaactttttgacatttaaCATAATCCTAATATGTATAC
CAAATGTTATCATCATACACCCactagatcaggttttatgactgaGTATT
TTGATTTTGTGTGGGCGTGTCATAAAGTCCaactaaaaccctgtaaaatc
tcaaagttgaaattttcggTAAAAACCGACactaatttcattgtttttta
acTTGTCCCCAGGTCACTTGAAAAGCGTAGCTGACGTCAACTACCATAGA
TACGGTATAATTCTtagttttgatatttaaatattttatatatgttaacg
atttgacataaaaaatttgcaccttgggtaggctgctggcatctaCTAAA
GgatatactacctggggttttgtagaggtagGCTATTCAGACTATGCAAG
TTGGGTGGAGTGGAAAAACTCAATTTAGTTACCATTCCTGAGTGTTTTTA
TAAGGTCAGACCATTTCATTCTTATCAATCTTGTTCCTAGGTTATGAAGT
CAGTAAGCAAATTAAAGCGGTGCCGGCGGcgttacttaatttttttttct
aactcGCTTTGACAGGCCGAAAGAACGATATAATAGAAAGTGAAAATCGT
AAACGAAACAGCGTCAAAATCAACCTTTGGAATCCAACACAACCCGGAGA
ACGATTAGTCATACCATACTCTTTCAGGTAAGATGAAATCTTTCTCGTTA
ATTTTGCATTTAGCTGCAGTCTTTGTNTAATAGTTGACTTAAACTATGAT
TTGAAACTGGACTTCATGGCGTCTCCGTCCCAATCATCGATCGAAATTAA
TCTATAGTATTAGGTCTTTTTATGACTCCTTTTTACCACTATCCTAATTT
CCTATTTTTCTTTCCCTCCAAACTGTAGTGTCCAACTTCAAACGCCTTGC
AAAGAAATTGAAACACATCATTGGAGAGACGAAAGTGTTGAAACGAGTAC
TTGACTCAAGGAAGAAATTTGGTGCGTTTCAAAGCTTAACCCGCTTTTTA
TCAGGGGAGGGGTGATTTCCACCACCTTGGTGGTTGGTGGTTTTTTGTTA
ATAGctcacagaaaaaaactttttttgacactgaaactttttgacattta
aCATAATCCTAATATGTATACCAAATATTATCATCATAAACCCACTAGAT
TAGGTTTTATGACTGAGTATTTTGTGCGGGCGTGTCATAAAGTCCaacta
aaaccctgtaaaatctcAAATGTTGAAATTTTCGGTAAGAACCGACacta
atttcattgttttttaactcgtCTCCAGGTCACTTGAAAAGCGTAGCTGA
CGTCAACTACCATAGATACGGTATAATTCTTAGTTTTAATATTTAAACAT
TTTATATATGTCAACGATTTGACATAAAGAATTTGCACCTTGGGTAGACT
GCTTGCATCCACTAAAGGATTTGTGCTCCTTAtttactacctggggtttt
gatGTAGGCTATTCAGACTATGCACCTTGGGTGGAGTGGAAAAACTCAAT
TTAATTACCATTTTATGCTtccctacacaaattttgcacccctCCTGTCT
GCGCTACTATAATGCGTTAGTTAATTTCTTTATCATATCTCGCTTCGACA
GGCCGAAAGAACGATATAATAGAAAGTGAAAACCGTAAACGAAACAGCGT
CAAAATCAACCTTTGGAATCCAACACAACCCGGAGAAAAATTAGTCATAC
CATACTCTTTCAGGTAAGGTGAAATTTATCTCGTTAATTTTGCATTTAAT
TGCAGACTTTTTTGTGGTATTCTCAAAGTGTTCTCataattcaaaatcaa
ttttaatttattaaTGATTTTGTGCCAAGTGCTAATACTTTTTAACGCAT
TTCCATTTGTAATTTATTAATGATTTTGTGCCAAGTGCTAATACTTTTTA
ACGCATTTCCATTTGTAATTTATTAATGATTTTGTGCCAAGTGCTAATAC
TTTTTAACGCATTTCCATTGGCATCAGACTATATCAAGTTCTTGCTAACC
CAATAAAAAACGGATATTCGAACATCTCGTTCTAACCAGGTTATTTTTTC
CGCTTTAGATCTGACTATCCAAATAGACTTCGACCATACGTTGAGAAAGC
CATAAAATCCATGAATCAACATTTGAGATGTGGTTACGATGTTTGGGTAC
CTTACAGTAACCAAGCTCATCGTGTTGAGTTTATCAAGGATGGAGGGTTT
GTTATTCGACTTACTATTATTTATTTCCGAGTAGATTCTGATTACTCTGC
GTTGGCACGTATTCACTATAAAGGTTGGTACTCTGGGAGAAAATCCATAA
AATGGGGGGTCAATATTAAGTGATTTTGGGGTGACTTTCCCAAAAAACCC
TAGGAAAATTTATGGTCATTATAAAATTCTATTGGAGTGTGTTTTCCGAC
AAAAATGCAAAGTGACCCCCTCCCCTACAATTAAGCACAAATAAGGAGTT
AGCGCACCGCTTTGATCTTTTCCAGTCAAATTTGGGATGAATATTAAATA
AGTTGAAATATTTTTATGGGACAAGAGATTTTCCTGAAATTGTGATCAAT
GCTTAAGCAAATACTAGTGAAACTTCTCGGGATATTCATTTTTGAATGAC
GGGGGATTTTTCAATTGTCGAAACAAAAAGTTTTTTCTCTTTTCAGTTGT
TACAGTTTATTGGGCAAAGACACCAGTGAAGGGAATAAACAACCAATCAG
TATCGATGATGGATGCGAAGCAAAACGTGAGTGATATGCACTTTTTTCGA
CTGTAACCACCAATTGCATTTTATTTTTCGTTTTTTTCCACTAAAACCGT
CCCAGTCCTTTTTTCGCACCTATAAACAATAGAAAAATGTATCAAAAAAG
GATTGGATCGAGTTTAGGGGGTAATTAAAGGGACATTAAAGTAGTAAAAT
GTAAACATTGCGCGAACCACGTGTCATTAAAAAAAACAATTAAAATCACG
TGTCCAAAACAAACTTGTAAAACAATTGAACAATCAAAATTAGCCATATt
tggtttgattttttattttgacatgtgacatttgttttgattttgtatcc
gctgcatacagtttgtttacaaatttcgcaagtactgttatgtcccttta
aatacgcgcgactacggtcgaaaaggtgtatttttatGTTATCGTATTTT
TCTGATTTACAGTCGAGAAGTAAGCTTGTTACTCTTCACTTTTtactcac
agacccggtgggggTAAATATAACAGACCAAAACTAGATGCTTTTTTTAT
GGCTTGGGATTTGGATTTGTTTTCGAATTTAGaatatgattttgatattt
tgataccAATTTTTCCAATCGGAAGGAGTCGAATctatgagaaaggggtg
tataaTTCTCTTGTGGTGATGGTGAAAGATGCATTGAAACGGGATTGACA
CATTCACATTGTTTACTGGTTCAAAAGATTTACAGTCGACATTCAACAAC
TCGAACATGAAAGGGGAAAGAGGAAAAAATCATTCGAGTAAGGAGGGTTA
TATCATAGTCACTAGAATTGACATTGGTTAAATTTATAGATAAACTAAAT
AGCCCTAAGACTTTTTTCATGAGTTCAGGTTCTTCTGTATAAACGTCAAA
TGAACGTTAAAAAATATTACGTACCAGCACGACTGCTATATCATCATAAA
ACTTCTTTTCTTTTGCTAGATATTGTTTTGCACGAAATGATGCATGCAAT
GGGATTCTATCATGAACAGAATCGCTTCGATCGTGATCAATTCATCAAAA
TCAACTGGAACAATATTCAAGACGGTAAGTTTCTTATCTCTAAATAACTT
TTATCCCTGAGGTGATTATTCTGTCCAAAGAGCCTGTGCAGGTTTATCTT
TAGGGACATGTCGTAAATACATGGAGGACGAAAAACTAGTCTCTTGTAGG
TTGTATTTAATGGAGAAATCATCAGGAAAACATGTAATTTTAGTCCTATT
CTCAGGGGTACCTTTGATCACTAATTTTTACAACAAACGATACTATATTG
GTTTTATGGATATTCAATACTGTTTTTTTCCCGGTAAACTCAAAACCCAT
CAAAAATAGATAATTAAGAAAATTAGATATCTGAACTGGCTGAGTTTTCT
CTATTTAGGTATGGCAAGTCAGTTCGACAAAGCATCAAATAACAACATCT
TCCAAACTAGCGTGGTAAGAGTTCTCTTTCTTATTGTTCTACGGTTAACT
CAAATTCGTCGATTGGATTTCACTTCGCAAAtcttaaactttaaaaattt
cataTCTTCATATCGACTGTTTAGCGAATCAACTGAGCATGAGTTCATCT
CATCTCTTTGACTAGtgttattttaatttatttttgggACTGGAAAAGTT
TTTCGCAAAAGGCGAAAATCGGCAAATCATAAGCAGATATTATACATTTT
ATacaattaaattcaaaataaatccGGGTTATGTTAAGGAACATTTCACA
TTATCATATATCACCTTTAGTAGTGTGTAGTAGCACTTATTATGTCCATC
AGCTGACACGTGTTTTGTCCTATTCAGAACTGGCAATGCAGCTTGGTGAA
TGAATATAGACTACTGACTAAACACTAAATATTAACTAATGCCTTATCGC
TTTTGGTGAATGAACTAGCGTAGCCTTGCTCCTCAACATAATCCAATAAT
ACGcactatacatgttttttagaagcattgcacttataggcatgtctagg
ctcagatatggcaaaaatttaagtcTAATTTAAGCATCACCTGAAGCCTA
CGAATAAATgtattttccagatttttgctgtttttggctGAGATTTTACG
GATCTTCggaattttcctaaaattttgcTTGTGATATTAGCATCCTTATA
AGCTTTTTTTAGCCTTGTCAAGCCCTCGACCTAAGCATCTTCGAGCCTGT
TTTCGaatttatgcttattaaaaaaacatgttaatGCCTCTTTTTTTTGC
TATACATTACAGCCATATGATTACATGAGTGTTATGCACTACTCTTTGTC
ATCATTctctaaaaatggtcaaaacacCATGACGATCTTGAAAAATGCTC
AGAGTGCAAAGTTAACGGCACAGGACTTACGAATCCTTGGAGACGTTCCC
GATTTATCTGCAGAGGATTTACAAGAAGTTAGAGCTTATTTCAACTGTAA
GTAtctaacacccctgtgtcacagacccgctgggaccccaacCTAATGAA
ACTTTCCCACAGCGAAgataaaattttagaaatctttgaaaagttaGAGC
TtacttcaaaaagtttgtcTAATAGGCCCCGATCCCCGATGAAACTTtcg
aaaaatccagtggggatgggtttagagtgcaattttttatatttgatttt
ggATGGggttgaaatcaaagtcaatttcccagtggggccgGGGTTTCAAC
acgtctgtgacacaggggtgttatctTTCAAAAGTTTGTCAAATCTATTC
ATATTGATATGGAATACCCATGTTTCATTCTGTACTTCAACAAATGTGTT
ATAATCTCCGACTTTTCTCTCTCATTTTTTTCCGAAAGTATTCTTTATCA
TCCCTCTCTAAATCGATCTTTAAGTGGCCAAAAATTGTCTTCGAAataga
gaaagattcaaattacaAAGACTGTTTTATACTAATTTCAACCTGAGGTA
TCAATAtttcgaattacaaaaagattTGAATAGGAGAGACTCGAATAAGA
GAGAGTTGACagtatttcatttttgaaaacgatAACCATTAGGTAATTCT
GCCGGTGGCCGAACAACAGCACGACCAGCACCACGAACAACAGCACGACC
AGCGCCACGAACAACCCGAAGACCTGCAACGAATCGTCCACGAACAACCC
GAGGAACAACAGAAACAGGAGGTGAAGCTACATGGTCATGGGTATCTGAC
GGATCAACAGAATCATATGGTACTGATGCTACAGAATCATATGGCACAGA
ATCATATGGTACGGAGGCTACAGAAATTTATGGTACAGAGGCTACAGACA
TTTATGGTACTGAGGGTACAGAATTTTATTGAGGCTCTCAAGGTCCAGAA
CTTGTCTGGAGCTGATAATGGAGCTGATGATGACGCTATATACTCAATGC
TCTAAAGAATATTTCATATAAAGATATCTTTCAAAGTAGGGAACAATGGA
TTTGATGGTTAAAATCTATATATTGCTATTTACTAATTTGAGATATAGAT
CTtatatgaattatttttcaagccgaaaatattttcaagttgTATTTCTA
TAGTTTTATATCGATCTATTTATTCGCTAATTTACGTAAACtttttttgt
aacctttttttACATGTaacatttcgaaatttatttcttttgatatttac
ATATTCAAACTCAGATTCACTTTCAAACCATTTTACGAATAGACCTTGGA
AAAGTCCTCTTTTAAAAAACCAAGAAAATATGCAAAGTAAATATGTCTGT
GGCCCAAAAGCTTCTCATTGATAGCTAACTGATGGTAGGGGAGGGCACTA
CTTTTCTGGTGTGAGCAAAAGCATCATCAGacaaattagttcccgcaaaa
aatagTTTATTTAAGGTAAAACATTTTACTCTTgctctttttttctcttc
aaaatGGAAATTGATAACATTTGAAGGTTCTTTTTCAAAGTGTTTATTCT
TAGATTCGTTTCtttattcaaaacattttaatcAATCTGACAAATCGATA
AGCTCGAACTCTCCAACAGTAGTTTCAGCTTTCGTGGTTTCTCCGAAAGT
GATAGAACGAGTTTTTGGTTGGTTTTGTTTAGCTGCTGCTTTTCTTTGTC
GTGCCGACCGTCTTCGGCTAGCCGACCTTTTTCGTTTTGCCGATGTTGAT
CGTTTTCGGGAAGAAGATCTCTTACGGGAGGCAGAACGTTTTCGTTTTGC
CGAGGCTGATCGTTTTCGTGTCGGTATAGCCGACTTTTGTCGTCTAGCAC
GTCGCTTTTTGGAAACCGATCTTTTTGGTGTGCAGTATATTTCTTGAGGA
ACGTCGGTGGGTGGGGTCGATGGTTTTGCCGACACAAGACGTTTTCGAGA
AGTGGACTTTTTTCTCGAGGCTGACCTCTTTCGGGATCCTGATCTTTTCT
GGGAGTTTAATTTCTTTGAAGAAGGTGTTGATTGACTTTCCGTTAAAGTT
TGAACCAACTTTTTCGTTTCTTGGTTTGTTTGCTTATTAACAACAGCCGC
CGACTGGCTTCGTTTAGCAGAACGAGAACGTTTTCGTCTTACCGAATGAC
TTCTGCGTACCGATGGTGATCGTTGTCGTGCAATACTCGGTGAACTCTTT
CTTCCATAAGTTCTACGTCGACGATTCGATCCCGATCGTTTTCGAGATGC
CGAACGTTTTTGGGACACTGCTCTCGGGCTTTGTGAACGAGCACGTTGAC
GTGAGATTGAGCGCTGGTTACGTGAGCGGGATCGTTGTTTACGAGACATG
GGACTACGTCTTCGTGATAAAGATCGTAACCTACGACCTGGAGATCGTCC
GCGTCGTCCTAAAGATTAAGAATAAGAACTTTGTTTAGTTTTATGGTGGA
AGATGATCAACTATACTATTATGTATTTGGCATGCATTAACATTACAATG
TTTTCAACATCTTCAACATAAGTTTTATACTTACTTAATGCTCTACTTCT
GGTTCGCATCTTGAAAAATGTTGCtgacaaagaaagaaaaagtcgGTGCT
TTGTGCTTGTGTATGTACTAGATAACCGGTGGTGTTTACTTGGTTGAGAA
TACAGTTGTTAGAAAGTATTGCACAAAGTTACTTGAACTCTACTTAatta
aat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039287XLOC_039287Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062686-exon-scaffold_371-1491911889:428710..429035TCONS_00062686-exon-scaffold_371-1491911889:428710..429035Clytia hemisphaericaexon
TCONS_00062686-exon-scaffold_371-1510915933:428710..429035TCONS_00062686-exon-scaffold_371-1510915933:428710..429035Clytia hemisphaericaexon
TCONS_00062686-exon-scaffold_371-1575043694:428710..429035TCONS_00062686-exon-scaffold_371-1575043694:428710..429035Clytia hemisphaericaexon
TCONS_00062686-exon-scaffold_371-1491911889:430131..430209TCONS_00062686-exon-scaffold_371-1491911889:430131..430209Clytia hemisphaericaexon
TCONS_00062686-exon-scaffold_371-1510915933:430131..430209TCONS_00062686-exon-scaffold_371-1510915933:430131..430209Clytia hemisphaericaexon
TCONS_00062686-exon-scaffold_371-1575043694:430131..430209TCONS_00062686-exon-scaffold_371-1575043694:430131..430209Clytia hemisphaericaexon
TCONS_00062686-exon-scaffold_371-1491911889:433427..433474TCONS_00062686-exon-scaffold_371-1491911889:433427..433474Clytia hemisphaericaexon
TCONS_00062686-exon-scaffold_371-1510915933:433427..433474TCONS_00062686-exon-scaffold_371-1510915933:433427..433474Clytia hemisphaericaexon
TCONS_00062686-exon-scaffold_371-1575043694:433427..433474TCONS_00062686-exon-scaffold_371-1575043694:433427..433474Clytia hemisphaericaexon
TCONS_00062686-exon-scaffold_371-1491911889:434169..434207TCONS_00062686-exon-scaffold_371-1491911889:434169..434207Clytia hemisphaericaexon
TCONS_00062686-exon-scaffold_371-1510915933:434169..434207TCONS_00062686-exon-scaffold_371-1510915933:434169..434207Clytia hemisphaericaexon
TCONS_00062686-exon-scaffold_371-1575043694:434169..434207TCONS_00062686-exon-scaffold_371-1575043694:434169..434207Clytia hemisphaericaexon
TCONS_00062686-exon-scaffold_371-1491911889:434517..434609TCONS_00062686-exon-scaffold_371-1491911889:434517..434609Clytia hemisphaericaexon
TCONS_00062686-exon-scaffold_371-1510915933:434517..434609TCONS_00062686-exon-scaffold_371-1510915933:434517..434609Clytia hemisphaericaexon
TCONS_00062686-exon-scaffold_371-1575043694:434517..434609TCONS_00062686-exon-scaffold_371-1575043694:434517..434609Clytia hemisphaericaexon
TCONS_00062686-exon-scaffold_371-1491911889:434922..434963TCONS_00062686-exon-scaffold_371-1491911889:434922..434963Clytia hemisphaericaexon
TCONS_00062686-exon-scaffold_371-1510915933:434922..434963TCONS_00062686-exon-scaffold_371-1510915933:434922..434963Clytia hemisphaericaexon
TCONS_00062686-exon-scaffold_371-1575043694:434922..434963TCONS_00062686-exon-scaffold_371-1575043694:434922..434963Clytia hemisphaericaexon
TCONS_00062686-exon-scaffold_371-1491911889:435275..435386TCONS_00062686-exon-scaffold_371-1491911889:435275..435386Clytia hemisphaericaexon
TCONS_00062686-exon-scaffold_371-1510915933:435275..435386TCONS_00062686-exon-scaffold_371-1510915933:435275..435386Clytia hemisphaericaexon
TCONS_00062686-exon-scaffold_371-1575043694:435275..435386TCONS_00062686-exon-scaffold_371-1575043694:435275..435386Clytia hemisphaericaexon
TCONS_00062686-exon-scaffold_371-1491911889:436768..436905TCONS_00062686-exon-scaffold_371-1491911889:436768..436905Clytia hemisphaericaexon
TCONS_00062686-exon-scaffold_371-1510915933:436768..436905TCONS_00062686-exon-scaffold_371-1510915933:436768..436905Clytia hemisphaericaexon
TCONS_00062686-exon-scaffold_371-1575043694:436768..436905TCONS_00062686-exon-scaffold_371-1575043694:436768..436905Clytia hemisphaericaexon
TCONS_00062686-exon-scaffold_371-1491911889:437356..437435TCONS_00062686-exon-scaffold_371-1491911889:437356..437435Clytia hemisphaericaexon
TCONS_00062686-exon-scaffold_371-1510915933:437356..437435TCONS_00062686-exon-scaffold_371-1510915933:437356..437435Clytia hemisphaericaexon
TCONS_00062686-exon-scaffold_371-1575043694:437356..437435TCONS_00062686-exon-scaffold_371-1575043694:437356..437435Clytia hemisphaericaexon
TCONS_00062686-exon-scaffold_371-1491911889:438379..438483TCONS_00062686-exon-scaffold_371-1491911889:438379..438483Clytia hemisphaericaexon
TCONS_00062686-exon-scaffold_371-1510915933:438379..438483TCONS_00062686-exon-scaffold_371-1510915933:438379..438483Clytia hemisphaericaexon
TCONS_00062686-exon-scaffold_371-1575043694:438379..438483TCONS_00062686-exon-scaffold_371-1575043694:438379..438483Clytia hemisphaericaexon
TCONS_00062686-exon-scaffold_371-1491911889:438818..438873TCONS_00062686-exon-scaffold_371-1491911889:438818..438873Clytia hemisphaericaexon
TCONS_00062686-exon-scaffold_371-1510915933:438818..438873TCONS_00062686-exon-scaffold_371-1510915933:438818..438873Clytia hemisphaericaexon
TCONS_00062686-exon-scaffold_371-1575043694:438818..438873TCONS_00062686-exon-scaffold_371-1575043694:438818..438873Clytia hemisphaericaexon
TCONS_00062686-exon-scaffold_371-1491911889:439672..439855TCONS_00062686-exon-scaffold_371-1491911889:439672..439855Clytia hemisphaericaexon
TCONS_00062686-exon-scaffold_371-1510915933:439672..439855TCONS_00062686-exon-scaffold_371-1510915933:439672..439855Clytia hemisphaericaexon
TCONS_00062686-exon-scaffold_371-1575043694:439672..439855TCONS_00062686-exon-scaffold_371-1575043694:439672..439855Clytia hemisphaericaexon
TCONS_00062686-exon-scaffold_371-1491911889:440452..442512TCONS_00062686-exon-scaffold_371-1491911889:440452..442512Clytia hemisphaericaexon
TCONS_00062686-exon-scaffold_371-1510915933:440452..442512TCONS_00062686-exon-scaffold_371-1510915933:440452..442512Clytia hemisphaericaexon
TCONS_00062686-exon-scaffold_371-1575043694:440452..442512TCONS_00062686-exon-scaffold_371-1575043694:440452..442512Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_371supercontigscaffold_371:428710..442512 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
111.595	114.668	30.4214	21.6138	37.4426	27.7467	0.156794	0.853077	0	0	0	0	0.0158696	0.152911	0	0	3.03372	2.59479	0.514168	0	7.77408	9.60846	44.2219	39.5598	28.4574	30.8182	15.2734	16.001	12.1691	14.5984
Blast
[Close]
BLAST of TCONS_00062686 vs. Swiss-Prot (Human)
Match: ASTL (Astacin-like metalloendopeptidase OS=Homo sapiens GN=ASTL PE=1 SV=4)

HSP 1 Score: 109.768 bits (273), Expect = 4.701e-25
Identity = 73/229 (31.88%), Postives = 114/229 (49.78%), Query Frame = 3 
Query:  633 KNDIIESENRKRNSVKINLWNPTQPGERLVIPYSFRSDY--PNRLRPYVEKAIKSMNQHLRCGYDVWVPYSNQAHRVEFIKDGGCYSLLGKDTSEGNKQPISIDDGC--EAKHIVLHEMMHAMGFYHEQNRFDRDQFIKINWNNIQDGMASQFDKASNNNIFQTSVPYDYMSVMHYSLSSFSKNGQNTMTILKNAQSAKLTAQDLRILGDVPDLSAEDLQEVRAYFNCN 1307
            + DII     +  S   N W P      + +P+   S Y  P+R     +  ++++ +  R     +V Y +Q   +  I   GC+S +G+    G  Q +S+   C  + + IVLHE+MH +GF+HE  R DRD++I++NWN I  G    F K+ ++N+     PYDY SVMHY   +FS+ G  T+T         L A  + I G   +LSA D+  V   + C+
Sbjct:   75 EGDIIRPSPFRLLSATSNKW-PMGGSGVVEVPFLLSSKYDEPSR-----QVILEALAEFERSTCIRFVTYQDQRDFISIIPMYGCFSSVGRS---GGMQVVSLAPTCLQKGRGIVLHELMHVLGFWHEHTRADRDRYIRVNWNEILPGFEINFIKSQSSNML---TPYDYSSVMHYGRLAFSRRGLPTIT--------PLWAPSVHI-GQRWNLSASDITRVLKLYGCS 282
The following BLAST results are available for this feature:
BLAST of TCONS_00062686 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ASTL4.701e-2531.88Astacin-like metalloendopeptidase OS=Homo sapiens ... [more]
back to top