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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00062785 ID=TCONS_00062785|Name=TCONS_00062785|organism=Clytia hemisphaerica|type=transcript|length=1531bp
AAAAATCCCTATGAAAAACAACCCCTGGTCAAAAATGATTTGAATAAGGT
GTCTCCATCCCATAATTGTAGACGtttagattttctattttgtcaagaat
tttttgtgagcataaacttttgcaaaGGACCCTAGAAAGAAGTTTCAAAG
acattaacttttttaattttttatttgaaatattttgccaaaTGTTATAG
TTTTTTGGAGGGCTAGATGAGCAGACATAGCTAAAAGACTTTAGCTAGTC
GCGATACCATTTTGACTTCAAAGGTGAATACATCATTACGCAATGACTCT
ACACAATAGCCTAATAGTAGATCAATTTCAAcctgttttatttttatcaa
atactGTATTTCATGTAACTAATAACTAAGCGTATGCATGTTGAGATTAA
AAGTCCAAATACAAACATTTAACAGTAGCTACATACAGATTAGACTAAAA
TTCCtaccgtcaacggctctaacttgggactacctgacaaaacatgggat
ggcaattcggccacaattttaccaaaacactaaagtcatttaatttgatT
ATCAAATGCAAACAGCAAATTATGAAATAAGCAAATTTGctttcgcacca
agtaggcttcaaatcaaaatgggccattccagaatttgtctatAACAGGG
GGCGGACAACACGAGATTTACTAGGACAGATGTTtacatcaaaattcaaa
atttccaaggcgagagaagaaaaggCAATTCAACcaaaggaaaaaaatta
tttccgaggctagaaaaaaatttaaaatgtacgTCGTCTGACGGGGGTAA
CGAAAATTATCTTGAATGACCCAATATGTTAAAAAAACTTTGTATATAGT
GGACTGTCTGCGCACTCTGATTGCACACTCTGATCATCAGACTGAGAGGA
AGAAGAATAAATTGGTCGCAACACGACGGAGCAAATCAATAATGGTTATT
TGTTCATCACATCATGCAATAGGCACAAAAAAGGATGTGTTATCAGTTAA
AGCATTAGGTAGGGTGCCCACTTATTGGGATTTTTGGCGCTGAACAGGAA
GAATTCACCAAAATAAATTTAACAATGCATTGTACCTGATACTTACCTTT
AAATTGTTCAaatcttttcattctttttttaaatcaatcagaaattacat
atcagggaaacaaataaaaaaactgaatctttccaaagatattgatgttt
tttgacgtcaaggtgaaaacatGACTAAGCGCTGACttacggcaccggaa
aattcctGACCTGCatggaaacaaatggctgtcgctaatgagctggttca
tcttttcaatcacAGTTTTTTAGTAAACCAAGGGTaggattaggctacaa
tctatcacatgctgctttatttgaaaatctacaggttgtttggaaaataa
aagaaattgcgattttttcaTGTTAGCAGTATACACAgatttcccgcgtg
ttagtgtagacacaactttaatccagggaaatgaagcgttttcattggtc
taaaatcacggatggtcacgtgaccagaatt Run BLAST on NCBI transcript from alignment at scaffold_371:450812..452342 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00062785 ID=TCONS_00062785|Name=TCONS_00062785|organism=Clytia hemisphaerica|type=transcript|length=1531bp|location=Sequence derived from alignment at scaffold_371:450812..452342 (Clytia hemisphaerica)
aattctggtcacgtgaccatccgtgattttagaccaatgaaaacgcttca
tttccctggattaaagttgtgtctacactaacacgcgggaaatcTGTGTA
TACTGCTAACAtgaaaaaatcgcaatttcttttattttccaaacaacctg
tagattttcaaataaagcagcatgtgatagattgtagcctaatcctACCC
TTGGTTTACTAAAAAACTgtgattgaaaagatgaaccagctcattagcga
cagccatttgtttccatGCAGGTCaggaattttccggtgccgtaaGTCAG
CGCTTAGTCatgttttcaccttgacgtcaaaaaacatcaatatctttgga
aagattcagtttttttatttgtttccctgatatgtaatttctgattgatt
taaaaaaagaatgaaaagattTGAACAATTTAAAGGTAAGTATCAGGTAC
AATGCATTGTTAAATTTATTTTGGTGAATTCTTCCTGTTCAGCGCCAAAA
ATCCCAATAAGTGGGCACCCTACCTAATGCTTTAACTGATAACACATCCT
TTTTTGTGCCTATTGCATGATGTGATGAACAAATAACCATTATTGATTTG
CTCCGTCGTGTTGCGACCAATTTATTCTTCTTCCTCTCAGTCTGATGATC
AGAGTGTGCAATCAGAGTGCGCAGACAGTCCACTATATACAAAGTTTTTT
TAACATATTGGGTCATTCAAGATAATTTTCGTTACCCCCGTCAGACGAcg
tacattttaaatttttttctagcctcggaaataatttttttcctttgGTT
GAATTGccttttcttctctcgccttggaaattttgaattttgatgtaAAC
ATCTGTCCTAGTAAATCTCGTGTTGTCCGCCCCCTGTTatagacaaattc
tggaatggcccattttgatttgaagcctacttggtgcgaaagCAAATTTG
CTTATTTCATAATTTGCTGTTTGCATTTGATAatcaaattaaatgacttt
agtgttttggtaaaattgtggccgaattgccatcccatgttttgtcaggt
agtcccaagttagagccgttgacggtaGGAATTTTAGTCTAATCTGTATG
TAGCTACTGTTAAATGTTTGTATTTGGACTTTTAATCTCAACATGCATAC
GCTTAGTTATTAGTTACATGAAATACagtatttgataaaaataaaacagg
TTGAAATTGATCTACTATTAGGCTATTGTGTAGAGTCATTGCGTAATGAT
GTATTCACCTTTGAAGTCAAAATGGTATCGCGACTAGCTAAAGTCTTTTA
GCTATGTCTGCTCATCTAGCCCTCCAAAAAACTATAACAtttggcaaaat
atttcaaataaaaaattaaaaaagttaatgtCTTTGAAACTTCTTTCTAG
GGTCCtttgcaaaagtttatgctcacaaaaaattcttgacaaaatagaaa
atctaaaCGTCTACAATTATGGGATGGAGACACCTTATTCAAATCATTTT
TGACCAGGGGTTGTTTTTCATAGGGATTTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00062785-exon-scaffold_371-1491911889:450812..452342 | TCONS_00062785-exon-scaffold_371-1491911889:450812..452342 | Clytia hemisphaerica | exon |
| TCONS_00062785-exon-scaffold_371-1510915933:450812..452342 | TCONS_00062785-exon-scaffold_371-1510915933:450812..452342 | Clytia hemisphaerica | exon |
| TCONS_00062785-exon-scaffold_371-1575043694:450812..452342 | TCONS_00062785-exon-scaffold_371-1575043694:450812..452342 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_371 | supercontig | scaffold_371:450812..452342 . |
Blast
The following BLAST results are available for this feature:
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