TCONS_00062929 (transcript) - C. hemisphaerica

Overview
NameTCONS_00062929
Unique NameTCONS_00062929
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1499

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00062929 ID=TCONS_00062929|Name=TCONS_00062929|organism=Clytia hemisphaerica|type=transcript|length=1499bp
GTTATGACATGTAAAAATAGAGAGAGAGTTGACGATTTCTGTAAGTTGAT
AACAGGCAATCTATGAAAATGgtggaaaacattttttgaatgatATCAGT
ATTGTTTCTAGTAAAGTTTTGCTTTCCTGTTTGCAGTTCAATGAATGATT
TAGAGAAATGTTGATTTTAATACCACTTCTCTCAATTTGCAGTCTTGCAA
CGACTGCTGGAAGTAAAAATGTGGAGCCTAAAGGagCCCATGTATGCCAG
AGGCTAGAAAAGTACGAGACTCAAGAGCAGCAGACAAACACTAGACTGGT
GTCAGAGAGTTACAGATACTGTTGTGAAAGATTTCTCTTGTGTATGAAAT
ACTGCAGTGGTGTAAGATATCGAACAGTTTCAACAACAAAGAAAGTACCA
GGTCATGATCATCGCATCATAAAATATTGTTGTGAAGGATGGATCCAAAA
AGACCAAGAATGTATACctaCTTGTGATTTTCCCTGTTTTCACGGGACGT
GTATTCAACCAAATTTTTGTGGTTGCGCTGAAGGGTATACTGGAAAATCA
TGTGAAAAAGgGATACAAATACCAACTCAAAAACCAGTGGACAAAGATTC
TAACAACagtcaaaatgacaaaaataccTCTGAGGATGAAAACAAAGAAG
TACAGGATCACTATTGGTCATGGCTTGTACCCACCGTTCTTTTCATTCTT
CTAATTGTTGCTATAGTAATTGTATACAAAAGAAGACAAGAAAGCATCTA
CAAGGAGACATTACTAGTTGACAAATCACCCGTTCAATATAATAGCCTGC
AAAATGAAGCATACAGcagccaaaattttgatatcGAAGATGGAAAGAGA
CTCGCCGATAAAGCATAAATATTCAGTTTGTCTGGGTATGTGCTGTCCTT
AAGGGAGATTTTTGGGACCTGTGAGGGtcgaaaaaataggaaaagctcta
ctttcttctttttctccttgaatcatcaaaatttggtcaaattaacCCAA
AAAGATTCGTAAAAGTAGCActattttttctcctttttaatcccgctaag
ggtccgaggatCGAATGTCgggtggcacatacccgtcagctcgcaaccct
agtacccccgggggGTTTGTCCAGATCCTGATTGACTGTGCTTTACCATC
CTTATTTAGTGAATCAAAACTGCAGGTTTTTCACTCACTTTAGTCACTCC
GGCGGGCGctaaaataggaaaattttggcAGGCCAAAACTACAAAAATGT
ACTTAAAAACTAGCTAATGAATTTATCAAACAAACGCAATTTGCAAAgac
aaagattttcttttttattattccCCTACcccccagtggtttgcgtgaat
ttgtaaaaattttagtTGATAGTAGCCATGGTTATTTTCACTGGGATGAT
TTTTAAgttattgtaaattttgctttaaaaatttagtaattattttataa
tttcattGTTTCCAGAAATATGTCTATGATTATAACTTTGTCATCAAAT
Run BLAST on NCBI

protein sequence of TCONS_00062929-protein

>TCONS_00062929-protein ID=TCONS_00062929-protein|Name=TCONS_00062929-protein|organism=Clytia hemisphaerica|type=polypeptide|length=236bp
MLILIPLLSICSLATTAGSKNVEPKGAHVCQRLEKYETQEQQTNTRLVSE
SYRYCCERFLLCMKYCSGVRYRTVSTTKKVPGHDHRIIKYCCEGWIQKDQ
ECIPTCDFPCFHGTCIQPNFCGCAEGYTGKSCEKGIQIPTQKPVDKDSNN
SQNDKNTSEDENKEVQDHYWSWLVPTVLFILLIVAIVIVYKRRQESIYKE
TLLVDKSPVQYNSLQNEAYSSQNFDIEDGKRLADKA
Run BLAST on NCBI

transcript from alignment at scaffold_374:37780..42879-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00062929 ID=TCONS_00062929|Name=TCONS_00062929|organism=Clytia hemisphaerica|type=transcript|length=5100bp|location=Sequence derived from alignment at scaffold_374:37780..42879- (Clytia hemisphaerica)
GTTATGACATGTAAAAATAGAGAGAGAGTTGACGATTTCTGTAAGTTGAT
AACAGGCAATCTATGAAAATGGTGGAAAACATTTTTTGAATGATATCAGT
ATTGTTTCTAGTAAAGTTTTGCTTTCCTGTTTGCAGTTCAATGAATGATT
TAGAGAAATGTTGATTTTAATACCACTTCTCTCAATTTGCAGTCTTGCAA
CGACTGCTGGAAGTAAAAATGTGGAGCCTAAAGGGTAAGATTTTGATATA
TCCATCTTTTTGATGAAAAAACAAACGTTACCTTTTTAGCAGCCCTTATC
TCACTTTCCCAACCTCGCTAAACTCCTATAACTGGATTCTTTCCAGGGCA
TGAAATCAAAAGAGAAGAAACTAAAACTTTGCGGCTCCTTGACGTATCCA
TTTTATATATGGGGTATGAAACTTTAGGGCTTCTTGACGTATCCATTTTG
TATATGGGGCATGAATTAAAAAATCGGCTAAGCGCCCGCCCCACTGCTTC
TTAATTTGAAAATAACACTTAAAGTCTATCTCAAAAGTATATGAGCACTT
TATTTTTTTGACGAATTCTCAGCTGCAATATTAAAAGCCAAGCAGCGTTG
GAAAGATATTTCCAAGGAGCATAATGTAATAGATTAAAGCTTTTTGAAAA
GTTGAAAAATGAAGAAGAAAAATGAACACAAATAGGGCTGTGACAAACGG
GCTTACGTCACTCGACTTCACTCTCCAATCCTTAGTGGGACTAAAAGAGA
GGAAAAATAGAAAATCTTTTATACGCCTGCCTAGGTACCTCCCTGTTGGG
CTTGTATTTCCCCAGTCGCGATTCATTTTAATTTCATAATCTAACATTTT
CTATATCAAATGACAATGGCCGCCCCTTACGTTTACCACTGTTAAGTCCA
CTGTATGCATACAAAAAAGGTAAACTGAACTATATTTTCTTTTCAGAGCC
CATGTATGCCAGAGGCTAGAAAAGTACGAGACTCAAGAGCAGCAGACAAA
CACTAGACTGGTGTCAGAGAGTTACAGATACTGTTGTGAAAGATTTCTCT
TGTGTATGAAATACTGCAGTGGTGTAAGGTACCAGTTTATTAGATATTAT
ATTTTTATCTAAATAAGTTTGCGTTTATCGACCCAGTGATATTCATAATG
GAAGTATTCGTGGCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNGTGGCTTAGATCACAAGAGCCAAACGTAAA
TCTCGTGATCCAAGCCACAATAAACTTCCAATATTATATTTTTACCCGCT
CTGGCTCAAAACTCTTTTTGTGACATGTTTGAGGAACCTCTTAAACTTTT
GACAAAGAAATTGCCTTATTTGGTTGTAAGATGGATAGTGACTCGATATA
CTTAACAAAAAAGTCCATTGTGTTCTAATTTAGAACGCCATGGACAAGTC
CCTGTCCAATCTCTTACCCAAGAAGCAAATTGCACTCATTTACTGACAGA
CGTAATACAATCATGAGCTCCGGTCGTAAGCGCTATCAGAATCATAAAAA
AGTGAACTAACGGACTGTGTTTGAGATTTATAGTTGATTATACTTAAGAT
ATTCTAGTGGTGAGATCCATCAAATAATGTCTAAAAAATGGTGAAGAGTC
TCTTGAATCAATTCATGGATTTTTCCCGGGGGGGGGGGGGGAGGCAAAAA
AGATTGCCGGGGGGGGGGGGGGCAGTCAGAAAAATTGACTGACGGGTTTG
TGCGGCGGTTAAGGATATATGTTTTTCAAGATAGCAGTAATGCACTGAAA
GGGTGGAAATTTCAACGAATCCAGAAAAAATTGAAAAAAAGTTGCTCAAA
AAATTCTGATACTTTTTGCTCTAAAAGACCTAAAAAGAGTTGAAAATTTG
AAAAAAATATCACTGTAAGGGGATTTTTTATTTTCTGCATTGGAAGGTTG
CGATTTTAAAAGCCATTTTTTTCGCTGCACATACCGCCAGTTGGTGAACC
CACTGCTCACTTCCAGTTGACTACAATCGACTTCCAGTGCTTAGTTTTAC
TACCGGAGTATTCTTTTGTTTCAGATATCGAACAGTTTCAACAACAAAGA
AAGTACCAGGTCATGATCATCGCATCATAAAATATTGTTGTGAAGGATGG
ATCCAAAAAGACCAAGAATGTATACGTAAGACGATTATTTATTTATTCTT
AGTGTAGATTAGGGGTGCACTAAACAGTAAGTAAAACGACTAATTCAGAC
ATAGTAGAAAAATAGCAAAAAGTAATGGAGGGACTAAACTAAATCCCGTA
AAAATAGTCGTATTATTATATAACGCCTATACACGCATTATAAACGACTC
CAGTCTACACTACCATGTGATTCACAGGAATATTGAATATTGAACTGTGG
AGACAGCCTATTTTCATAGATTGAATTTTAGCTGATAAGAGATGTTCCAC
TTCTTCGTGAATTCAAATTATCTAATGAAAGCTCTTATTTAAAGTATAAG
ACAGAACACCCCTGTCTCACAGTCCTGGTGGAACTTTTTTCTCAGTGGAG
ATAAAAATTCCTATTGAAATCCCAATGGGGATAGAAATTATATTGTTCCA
AGGTTAAAAAATTCAGTGGTAATGGTTTTGAAGTGCAATTTTTAAACGTT
GAATTTCGAATGGGGATGAGATAAAAGTTACTTTCCAAGTGTGGCTAGGT
TTTTTTCTAAGGTATTTTCTCACCGGAGATGGAATTTTTGTCAATCTTTC
CAGTGGGCCCGGGCTCTCAGTGGGTATGAAAGTCAAGCTATTAAAGTTCC
CTGGTCCGAGTCCTGTAATAACTTACAAGGAAAACTTTTTTATTTTATTT
TTTCAGCTACTTGTGATTTTCCCTGTTTTCACGGGACGTGTATTCAACCA
AATTTTTGTGGTTGCGCTGAAGGGTATACTGGAAAATCATGTGAAAAAGG
TAAGACAACTTTTTGTTCTTGTAGAGAAATTGTACATTCAGATCATAGCC
ATAGGAGAAACAATAATTAGGTTCATTTTCTGCAGGTTCACTCGTAGTGT
TCGCCGCCATTTTGAATATTCTTTGCACTCCGTGTACGGCCGTCGAAAAA
TATCAACATTTCGCTGCGACGGCCTGTGTTAAGACTAAGGTTTCTCCTAT
GACTATGTTCAGATCGAGACCAGCATTTAGAAATCTGGATTAAATCAAAG
TGAATGATGTGGCATTAAATAAGGACACAAAATCTCAATCTTTTTTTTAG
GGATACAAATACCAACTCAAAAACCAGTGGACAAAGATTCTAACAACAGT
CAAAATGACAAAAATACCTCTGAGGATGAAAACAAAGAAGTACAGGATCA
CTATTGGTCATGGCTTGTACCCACCGTTCTTTTCATTCTTCTAATTGTTG
CTATAGTAATTGTATACAAAAGAAGACAAGAAAGCATGTAAGTTGAAGTT
TTGATACATGAATGAAATTTTGATTTAACAAGCACAAAATAATGTCAAAC
GTGGGGCCACTCGAAATTACTCTTCACTTTATTCAGCCAAAAGTAATTTC
AAAGATGTGAATAACTTGAAAAGTTTTTGAATCAGGACTTTGTCTCAGTC
CGAGTTCTAGAACAAAGCAGTCTTCTCAGTAGCATAGACAAGAGGGGCGC
AAAATTTGTGGAGGAGGGCAGATTTTATGGCATTGTTATGATATTTTCAT
AATATAAAAAAATAAATAATTACAATGTCATAAAAATCTGCTCCCCTACA
CCCAGGGGGGGATGTACTAGTGTTGTGAGCTGACAGGGGGGTGCCACCCG
ACTTTCTATCCTCGGACCCTTTACTGGGACTAAAAAGGAGAAAAAAAAGG
AAAATTTTATGAATTTTACGACCCTTACCGGGACAAATTTGACCAATTTT
GACCTTCTTTCTGGGGGTGAAAAGTTAAAATTTTCCTATTTCTTAGCGGG
ACTGAAATTTGATTTTCTGATTTTTCCGACCCTTAGCGGGACTTTGGAAA
TCCAAAAAAGGTACCCTTAAGGGCGGCACATACCGTACCCTCCCATTTGC
CTAAGTACCCCCTCCCCAGGCCCTACACAAATTTTGTCTACACTACTGAT
TCTGCTCTTACAGTTAAGTAGGGAAAATTTTCGAAAGATAATCCTATAAT
TAGCTTACCATGCAGGCCTGTGTATGCAGGGTGTGTCGCACCGCCCCTAG
ATTACACTGAAAAAATTTTTCCGGTCAATCATTTCTAAGCATTTTAACTG
TACAAAACTAACAAACTTTGTTAACATCTTCTTTACCACATTTTTCAGCT
ACAAGGAGACATTACTAGTTGACAAATCACCCGTTCAATATAATAGCCTG
CAAAATGAAGCATACAGCAGCCAAAATTTTGATATCGAAGATGGAAAGAG
ACTCGCCGATAAAGCATAAATATTCAGTTTGTCTGGGTATGTGCTGTCCT
TAAGGGAGATTTTTGGGACCTGTGAGGGTCGAAAAAATAGGAAAAGCTCT
ACTTTCTTCTTTTTCTCCTTGAATCATCAAAATTTGGTCAAATTAACCCA
AAAAGATTCGTAAAAGTAGCACTATTTTTTCTCCTTTTTAATCCCGCTAA
GGGTCCGAGGATCGAATGTCGGGTGGCACATACCCGTCAGCTCGCAACCC
TAGTACCCCCGGGGGGTTTGTCCAGATCCTGATTGACTGTGCTTTACCAT
CCTTATTTAGTGAATCAAAACTGCAGGTTTTTCACTCACTTTAGTCACTC
CGGCGGGCGCTAAAATAGGAAAATTTTGGCAGGCCAAAACTACAAAAATG
TACTTAAAAACTAGCTAATGAATTTATCAAACAAACGCAATTTGCAAAGA
CAAAGATTTTCTTTTTTATTATTCCCCTACCCCCCAGTGGTTTGCGTGAA
TTTGTAAAAATTTTAGTTGATAGTAGCCATGGTTATTTTCACTGGGATGA
TTTTTAAGTTATTGTAAATTTTGCTTTAAAAATTTAGTAATTATTTTATA
ATTTCATTGTTTCCAGAAATATGTCTATGATTATAACTTTGTCATCAAAT

Coding sequence (CDS) from alignment at scaffold_374:37780..42879-

>TCONS_00062929 ID=TCONS_00062929|Name=TCONS_00062929|organism=Clytia hemisphaerica|type=CDS|length=4266bp|location=Sequence derived from alignment at scaffold_374:37780..42879- (Clytia hemisphaerica)
CTACAAGGAGACATTACTAGTTGACAAATCACCCGTTCAATATAATAGCC
TGCAAAATGAAGCATACAGCAGCCAAAATTTTGATATCGAAGATGGAAAG
AGACTCGCCGATAAAGCATAAGGATACAAATACCAACTCAAAAACCAGTG
GACAAAGATTCTAACAACAGTCAAAATGACAAAAATACCTCTGAGGATGA
AAACAAAGAAGTACAGGATCACTATTGGTCATGGCTTGTACCCACCGTTC
TTTTCATTCTTCTAATTGTTGCTATAGTAATTGTATACAAAAGAAGACAA
GAAAGCATCTACTTGTGATTTTCCCTGTTTTCACGGGACGTGTATTCAAC
CAAATTTTTGTGGTTGCGCTGAAGGGTATACTGGAAAATCATGTGAAAAA
GATATCGAACAGTTTCAACAACAAAGAAAGTACCAGGTCATGATCATCGC
ATCATAAAATATTGTTGTGAAGGATGGATCCAAAAAGACCAAGAATGTAT
ACAGCCCATGTATGCCAGAGGCTAGAAAAGTACGAGACTCAAGAGCAGCA
GACAAACACTAGACTGGTGTCAGAGAGTTACAGATACTGTTGTGAAAGAT
TTCTCTTGTGTATGAAATACTGCAGTGGTGTAAGATGTTGATTTTAATAC
CACTTCTCTCAATTTGCAGTCTTGCAACGACTGCTGGAAGTAAAAATGTG
GAGCCTAAAGGCTACAAGGAGACATTACTAGTTGACAAATCACCCGTTCA
ATATAATAGCCTGCAAAATGAAGCATACAGCAGCCAAAATTTTGATATCG
AAGATGGAAAGAGACTCGCCGATAAAGCATAAGGATACAAATACCAACTC
AAAAACCAGTGGACAAAGATTCTAACAACAGTCAAAATGACAAAAATACC
TCTGAGGATGAAAACAAAGAAGTACAGGATCACTATTGGTCATGGCTTGT
ACCCACCGTTCTTTTCATTCTTCTAATTGTTGCTATAGTAATTGTATACA
AAAGAAGACAAGAAAGCATCTACTTGTGATTTTCCCTGTTTTCACGGGAC
GTGTATTCAACCAAATTTTTGTGGTTGCGCTGAAGGGTATACTGGAAAAT
CATGTGAAAAAGATATCGAACAGTTTCAACAACAAAGAAAGTACCAGGTC
ATGATCATCGCATCATAAAATATTGTTGTGAAGGATGGATCCAAAAAGAC
CAAGAATGTATACAGCCCATGTATGCCAGAGGCTAGAAAAGTACGAGACT
CAAGAGCAGCAGACAAACACTAGACTGGTGTCAGAGAGTTACAGATACTG
TTGTGAAAGATTTCTCTTGTGTATGAAATACTGCAGTGGTGTAAGATGTT
GATTTTAATACCACTTCTCTCAATTTGCAGTCTTGCAACGACTGCTGGAA
GTAAAAATGTGGAGCCTAAAGGCTACAAGGAGACATTACTAGTTGACAAA
TCACCCGTTCAATATAATAGCCTGCAAAATGAAGCATACAGCAGCCAAAA
TTTTGATATCGAAGATGGAAAGAGACTCGCCGATAAAGCATAAGGATACA
AATACCAACTCAAAAACCAGTGGACAAAGATTCTAACAACAGTCAAAATG
ACAAAAATACCTCTGAGGATGAAAACAAAGAAGTACAGGATCACTATTGG
TCATGGCTTGTACCCACCGTTCTTTTCATTCTTCTAATTGTTGCTATAGT
AATTGTATACAAAAGAAGACAAGAAAGCATCTACTTGTGATTTTCCCTGT
TTTCACGGGACGTGTATTCAACCAAATTTTTGTGGTTGCGCTGAAGGGTA
TACTGGAAAATCATGTGAAAAAGATATCGAACAGTTTCAACAACAAAGAA
AGTACCAGGTCATGATCATCGCATCATAAAATATTGTTGTGAAGGATGGA
TCCAAAAAGACCAAGAATGTATACAGCCCATGTATGCCAGAGGCTAGAAA
AGTACGAGACTCAAGAGCAGCAGACAAACACTAGACTGGTGTCAGAGAGT
TACAGATACTGTTGTGAAAGATTTCTCTTGTGTATGAAATACTGCAGTGG
TGTAAGATGTTGATTTTAATACCACTTCTCTCAATTTGCAGTCTTGCAAC
GACTGCTGGAAGTAAAAATGTGGAGCCTAAAGGCTACAAGGAGACATTAC
TAGTTGACAAATCACCCGTTCAATATAATAGCCTGCAAAATGAAGCATAC
AGCAGCCAAAATTTTGATATCGAAGATGGAAAGAGACTCGCCGATAAAGC
ATAAGGATACAAATACCAACTCAAAAACCAGTGGACAAAGATTCTAACAA
CAGTCAAAATGACAAAAATACCTCTGAGGATGAAAACAAAGAAGTACAGG
ATCACTATTGGTCATGGCTTGTACCCACCGTTCTTTTCATTCTTCTAATT
GTTGCTATAGTAATTGTATACAAAAGAAGACAAGAAAGCATCTACTTGTG
ATTTTCCCTGTTTTCACGGGACGTGTATTCAACCAAATTTTTGTGGTTGC
GCTGAAGGGTATACTGGAAAATCATGTGAAAAAGATATCGAACAGTTTCA
ACAACAAAGAAAGTACCAGGTCATGATCATCGCATCATAAAATATTGTTG
TGAAGGATGGATCCAAAAAGACCAAGAATGTATACAGCCCATGTATGCCA
GAGGCTAGAAAAGTACGAGACTCAAGAGCAGCAGACAAACACTAGACTGG
TGTCAGAGAGTTACAGATACTGTTGTGAAAGATTTCTCTTGTGTATGAAA
TACTGCAGTGGTGTAAGATGTTGATTTTAATACCACTTCTCTCAATTTGC
AGTCTTGCAACGACTGCTGGAAGTAAAAATGTGGAGCCTAAAGGCTACAA
GGAGACATTACTAGTTGACAAATCACCCGTTCAATATAATAGCCTGCAAA
ATGAAGCATACAGCAGCCAAAATTTTGATATCGAAGATGGAAAGAGACTC
GCCGATAAAGCATAAGGATACAAATACCAACTCAAAAACCAGTGGACAAA
GATTCTAACAACAGTCAAAATGACAAAAATACCTCTGAGGATGAAAACAA
AGAAGTACAGGATCACTATTGGTCATGGCTTGTACCCACCGTTCTTTTCA
TTCTTCTAATTGTTGCTATAGTAATTGTATACAAAAGAAGACAAGAAAGC
ATCTACTTGTGATTTTCCCTGTTTTCACGGGACGTGTATTCAACCAAATT
TTTGTGGTTGCGCTGAAGGGTATACTGGAAAATCATGTGAAAAAGATATC
GAACAGTTTCAACAACAAAGAAAGTACCAGGTCATGATCATCGCATCATA
AAATATTGTTGTGAAGGATGGATCCAAAAAGACCAAGAATGTATACAGCC
CATGTATGCCAGAGGCTAGAAAAGTACGAGACTCAAGAGCAGCAGACAAA
CACTAGACTGGTGTCAGAGAGTTACAGATACTGTTGTGAAAGATTTCTCT
TGTGTATGAAATACTGCAGTGGTGTAAGATGTTGATTTTAATACCACTTC
TCTCAATTTGCAGTCTTGCAACGACTGCTGGAAGTAAAAATGTGGAGCCT
AAAGGCTACAAGGAGACATTACTAGTTGACAAATCACCCGTTCAATATAA
TAGCCTGCAAAATGAAGCATACAGCAGCCAAAATTTTGATATCGAAGATG
GAAAGAGACTCGCCGATAAAGCATAAGGATACAAATACCAACTCAAAAAC
CAGTGGACAAAGATTCTAACAACAGTCAAAATGACAAAAATACCTCTGAG
GATGAAAACAAAGAAGTACAGGATCACTATTGGTCATGGCTTGTACCCAC
CGTTCTTTTCATTCTTCTAATTGTTGCTATAGTAATTGTATACAAAAGAA
GACAAGAAAGCATCTACTTGTGATTTTCCCTGTTTTCACGGGACGTGTAT
TCAACCAAATTTTTGTGGTTGCGCTGAAGGGTATACTGGAAAATCATGTG
AAAAAGATATCGAACAGTTTCAACAACAAAGAAAGTACCAGGTCATGATC
ATCGCATCATAAAATATTGTTGTGAAGGATGGATCCAAAAAGACCAAGAA
TGTATACAGCCCATGTATGCCAGAGGCTAGAAAAGTACGAGACTCAAGAG
CAGCAGACAAACACTAGACTGGTGTCAGAGAGTTACAGATACTGTTGTGA
AAGATTTCTCTTGTGTATGAAATACTGCAGTGGTGTAAGATGTTGATTTT
AATACCACTTCTCTCAATTTGCAGTCTTGCAACGACTGCTGGAAGTAAAA
ATGTGGAGCCTAAAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039418XLOC_039418Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062929-proteinTCONS_00062929-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062929-exon-scaffold_374-1575043694:42646..42879TCONS_00062929-exon-scaffold_374-1575043694:42646..42879Clytia hemisphaericaexon
TCONS_00062929-exon-scaffold_374-1575043694:41802..41933TCONS_00062929-exon-scaffold_374-1575043694:41802..41933Clytia hemisphaericaexon
TCONS_00062929-exon-scaffold_374-1575043694:40655..40755TCONS_00062929-exon-scaffold_374-1575043694:40655..40755Clytia hemisphaericaexon
TCONS_00062929-exon-scaffold_374-1575043694:39881..39973TCONS_00062929-exon-scaffold_374-1575043694:39881..39973Clytia hemisphaericaexon
TCONS_00062929-exon-scaffold_374-1575043694:39393..39579TCONS_00062929-exon-scaffold_374-1575043694:39393..39579Clytia hemisphaericaexon
TCONS_00062929-exon-scaffold_374-1575043694:37780..38531TCONS_00062929-exon-scaffold_374-1575043694:37780..38531Clytia hemisphaericaexon
TCONS_00062929-exon-scaffold_374-1510915933:42646..42879TCONS_00062929-exon-scaffold_374-1510915933:42646..42879Clytia hemisphaericaexon
TCONS_00062929-exon-scaffold_374-1510915933:41802..41933TCONS_00062929-exon-scaffold_374-1510915933:41802..41933Clytia hemisphaericaexon
TCONS_00062929-exon-scaffold_374-1510915933:40655..40755TCONS_00062929-exon-scaffold_374-1510915933:40655..40755Clytia hemisphaericaexon
TCONS_00062929-exon-scaffold_374-1510915933:39881..39973TCONS_00062929-exon-scaffold_374-1510915933:39881..39973Clytia hemisphaericaexon
TCONS_00062929-exon-scaffold_374-1510915933:39393..39579TCONS_00062929-exon-scaffold_374-1510915933:39393..39579Clytia hemisphaericaexon
TCONS_00062929-exon-scaffold_374-1510915933:37780..38531TCONS_00062929-exon-scaffold_374-1510915933:37780..38531Clytia hemisphaericaexon
TCONS_00062929-exon-scaffold_374-1491911889:42646..42879TCONS_00062929-exon-scaffold_374-1491911889:42646..42879Clytia hemisphaericaexon
TCONS_00062929-exon-scaffold_374-1491911889:41802..41933TCONS_00062929-exon-scaffold_374-1491911889:41802..41933Clytia hemisphaericaexon
TCONS_00062929-exon-scaffold_374-1491911889:40655..40755TCONS_00062929-exon-scaffold_374-1491911889:40655..40755Clytia hemisphaericaexon
TCONS_00062929-exon-scaffold_374-1491911889:39881..39973TCONS_00062929-exon-scaffold_374-1491911889:39881..39973Clytia hemisphaericaexon
TCONS_00062929-exon-scaffold_374-1491911889:39393..39579TCONS_00062929-exon-scaffold_374-1491911889:39393..39579Clytia hemisphaericaexon
TCONS_00062929-exon-scaffold_374-1491911889:37780..38531TCONS_00062929-exon-scaffold_374-1491911889:37780..38531Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_374supercontigscaffold_374:37780..42879 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0595452	0.107276	0.0701121	0.072255	1.07556	1.02576	6.08163	6.35559	6.75239	7.18753	14.1824	12.6357	32.8669	37.1681	26.0173	27.6516	13.0005	20.9919	33.7084	31.4799	22.2467	19.3545	8.51402	7.91249	19.8132	16.696	10.7099	8.00897	14.2248	14.8342
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000742EGF-like_dom
IPR013032EGF-like_CS
IPR011489EMI_domain
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00062929 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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