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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00062956 ID=TCONS_00062956|Name=TCONS_00062956|organism=Clytia hemisphaerica|type=transcript|length=458bp
CAAGGATATTGCTGGACGTTGGACAAAACATCTGGTTATAATCAACTCAT
TCTTTCATCAAAATGCCATGACGTATTTTCACTCGGTAGATACCAGTTTC
CTGCACACCCGTTTTCATTATGGCATATCGAGACCGGTTTGCGCGTCGAG
CGTCATGGTAACGCTAACAATGATGGGAATGATATACATCTTGGGAGCCA
AGAAACGGATGAGGGAGAAACCTTTATATCGAGAATGAAATGTATGATGA
TTATTAATAGTTGGTCAAGAGCTAGTTGTGTTTATCCCAATGGTAATCGA
TTGATGCTGAAAGGTGGACGTGATCACATCACCCAAGAAAATCCGTGTAA
ATTTCCTGGTGTGGACACGAGATCGAATTATCTACCAGATTACTCAGCAC
ATTACAACGTTTTGAACATGAAAAATGTCTTGCAAACAACCTTACCGGAT
GGTTCGAA Run BLAST on NCBI transcript from alignment at scaffold_375:140589..142501+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00062956 ID=TCONS_00062956|Name=TCONS_00062956|organism=Clytia hemisphaerica|type=transcript|length=1913bp|location=Sequence derived from alignment at scaffold_375:140589..142501+ (Clytia hemisphaerica)
CAAGGATATTGCTGGACGTTGGACAAAACATCTGGTTATAATCAACTCAT
TCTTTCATCAAAATGCCATGACGTATTTTCACTCGGTAGATACCAGTTTC
CTGCACACCCGTTTTCATTATGGCATATCGAGACCGGTTTGCGCGTCGAG
CGTCATGGTAACGCTAACAATGATGGGAATGATATACATCTTGGGAGCCA
AGAAACGGATGAGGGAGAAACCTTTATATCGAGAATGAAATGTATGATGA
TTATTAATAGTTGGTCAAGAGCTAGTTGTGTTTATCCCAATGGTAATCGA
TTGATGCTGAAAGGTGGACGTGATCACATCACCCAAGAAAATCCGTGTAA
ATTTCCTGGTGTGGACACGAGATCGAATTATCTACCAGGTAAGAATTTTC
ACATTGAAAATGATGTAATCAACGGATTATGTAATATATATACCTCTTTA
AATGGAATTTTTAACACTTTCCCCTTCGAGCATTTTGGACCATTTTTTGA
TAAGAGAGTccttaaaatctcaagattaatggctctggtcatagtgaaaa
atcaatttcaggatttgaagataaaaccttatgttttcgcttctttgaca
tgtttaagaacaaactgcttttgaaaaaatgaatttaagtaattacatca
tgagtaattaaggaataagtgtgacatggaccttaataaaacgtcatagc
gacgctattcatatacttttcacaaaaaaagcctaatctccttggagaaa
tcattttcattgtttcaaactttttttaagttgatAACAAATAAtctctt
tatttagattttttcggaaaaattttctattcggCTAGATCCCAAGTTAT
AActgttttcgtatggaaatttagtggaaaagattgccaaaaatgaggtt
ttttggagattttaaaggaaagatacttccataaaaatttttcgaaatta
tatttttagatactaaatagatacatcacctgaaccaaaaaaaattccaa
aatgtttgctttttaccgagattagagctttgaaaggtgaaatactcttc
ttcgaaaaactcttcgttttcttcttcatttaaattttttcatttcaatt
tttcgatttttaaactCTAAAAAGGTAGGcttaacaggacatataaaaaa
agtaatccattaatctttttaaaatgcagaaattgccatttaagttggtg
taaaatcgaaaaattgggtattTCCAGAGCCCTTAACAAATGCTATGatc
tcgaaattttgacaaGTGATAGATATGCATAATTCTTgggataatttgaa
aaattttggttcGCCAGCCTGTCTGATTGGTATttattttgcagaccaga
atgtaatttggctgaaattcgTTTTTGAAGTCATctgacttgaaatttgg
ttgCACAAGTATTACATCTACACGGCGACCCCGCGCAGGAACTCAGGAAC
TTATCGACCTTTtaacatgaaattttgaccaatggttGATATATACTATA
GTATAACACTCTTAGACAGTGTGCAAAATATCAGTTCAGTCACGTGTGTG
GTTGGTTTTTTACAGACCCTTCCAAATTTCTTTTCGGTAATCAATCATCC
GATTTTGTGATATTTTGTCTGTAAGTCAGTATCATCAATATACATAACAC
TAATCTAATTTCAAACCCATAACATTTCCCAATCCATGGGTCAATGATGC
CGATTTTTGTTTGGTGCACGCAAAATTGAAAGTCAATTGGATAAAACACA
AAGCCCGGTTAAAAGTTTTACAAGCATCGgtcctgataaacaaatttttt
tgaagaaatggAAAGCatgattgtgttttttttttcgctttagATTACTC
AGCACATTACAACGTTTTGAACATGAAAAATGTCTTGCAAACAACCTTAC
CGGATGGTTCGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00062956-exon-scaffold_375-1491911889:140589..140976 | TCONS_00062956-exon-scaffold_375-1491911889:140589..140976 | Clytia hemisphaerica | exon |
| TCONS_00062956-exon-scaffold_375-1510915933:140589..140976 | TCONS_00062956-exon-scaffold_375-1510915933:140589..140976 | Clytia hemisphaerica | exon |
| TCONS_00062956-exon-scaffold_375-1575043694:140589..140976 | TCONS_00062956-exon-scaffold_375-1575043694:140589..140976 | Clytia hemisphaerica | exon |
| TCONS_00062956-exon-scaffold_375-1491911889:142432..142501 | TCONS_00062956-exon-scaffold_375-1491911889:142432..142501 | Clytia hemisphaerica | exon |
| TCONS_00062956-exon-scaffold_375-1510915933:142432..142501 | TCONS_00062956-exon-scaffold_375-1510915933:142432..142501 | Clytia hemisphaerica | exon |
| TCONS_00062956-exon-scaffold_375-1575043694:142432..142501 | TCONS_00062956-exon-scaffold_375-1575043694:142432..142501 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_375 | supercontig | scaffold_375:140589..142501 + |
Blast
The following BLAST results are available for this feature:
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