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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00062992 ID=TCONS_00062992|Name=TCONS_00062992|organism=Clytia hemisphaerica|type=transcript|length=1188bp
gaaaaattggattttgccaaaaaaacatgaaaaacaatgaaattagttcc
aataacgTACTtagaaaagtgaaaataaataaTCTGCCTATTGATAGATA
AGATGTGTATAAAGATCAAAGTGGTAATGTTCCATTCTGAATTACTTAGA
GAATTTATTCTTCAAAAATGagtcaaatttaaaattagcaACCACTGCTC
ACTAAAACTCACATTTTTTAACCCATCAAAAATCACACCTAAAGATCCCT
ATTGAATTAAAATACTTAGAATGAAAAGAATTTATGGAAACTTTGACTTT
TATTTGTTGAATTAAACAGATTTTAAACGAGGTTAtcaaaaataactaaa
ataaaGAATGGGTGGGTAATTTGTGTCAATGAGATTTGCACAAAAATAGT
CTACTGTAAGGCTATGAAAGAAAATTACAAGACTGTAAAATGTCTATTCT
TGTCTCAATTACTTCACAATATTTTTACTATATATGAAGTACTTCCAACT
TCCAACCTCcatatttaaaagattttgtatgtataaaataaaatatattt
ataaaaccagacggtgtcaatcaaacaagttcaaacaaaaattgagtaaa
ttttttcttattattgttttgacgctggagtttttaattactCAATATGA
CATCCTAACTAGCAAAAAATCTATTGGGTGTAGCCCTAGAAGAAGACAGC
ACTACCATTTAGATTGACATTTACTCAAatggtttttcttttgtttacta
aAGAGAAATTTTGTTGTAACTATGGAAATCGACAGAAATAAGTGTTGGAG
TAGTACTATCTCCTAAAGGACTATTATACATGACATGTCGTGACAGTCTA
GTTGAATTTGGAAAACAGCACTTTTTTTAGTTCCAAAATCAGAACTTTTT
TATATAACTTTGAaacattttgcttggttttgctgcaactgcaaaatatt
tcaattgaattttaatagtgaaagaaaattgtattttttaacaaaatgaa
aaagggcctaaaattcaatctttctttttccaaaccatcaaaaaatcttg
aaaggTACGGTTTTATTTGTCTTTAGTACTGcgtattttgaaaattagta
gTTTACAGAGAAACTCTTTTACAAATTACTGATTGTGTGTCGatgaatgt
caaaaaaagttctgaaaatgaaaaaagctctatttctt Run BLAST on NCBI transcript from alignment at scaffold_375:22381..23568 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00062992 ID=TCONS_00062992|Name=TCONS_00062992|organism=Clytia hemisphaerica|type=transcript|length=1188bp|location=Sequence derived from alignment at scaffold_375:22381..23568 (Clytia hemisphaerica)
aagaaatagagcttttttcattttcagaactttttttgacattcatCGAC
ACACAATCAGTAATTTGTAAAAGAGTTTCTCTGTAAActactaattttca
aaatacgCAGTACTAAAGACAAATAAAACCGTAcctttcaagattttttg
atggtttggaaaaagaaagattgaattttaggccctttttcattttgtta
aaaaatacaattttctttcactattaaaattcaattgaaatattttgcag
ttgcagcaaaaccaagcaaaatgttTCAAAGTTATATAAAAAAGTTCTGA
TTTTGGAACTAAAAAAAGTGCTGTTTTCCAAATTCAACTAGACTGTCACG
ACATGTCATGTATAATAGTCCTTTAGGAGATAGTACTACTCCAACACTTA
TTTCTGTCGATTTCCATAGTTACAACAAAATTTCTCTttagtaaacaaaa
gaaaaaccatTTGAGTAAATGTCAATCTAAATGGTAGTGCTGTCTTCTTC
TAGGGCTACACCCAATAGATTTTTTGCTAGTTAGGATGTCATATTGagta
attaaaaactccagcgtcaaaacaataataagaaaaaatttactcaattt
ttgtttgaacttgtttgattgacaccgtctggttttataaatatatttta
ttttatacatacaaaatcttttaaatatgGAGGTTGGAAGTTGGAAGTAC
TTCATATATAGTAAAAATATTGTGAAGTAATTGAGACAAGAATAGACATT
TTACAGTCTTGTAATTTTCTTTCATAGCCTTACAGTAGACTATTTTTGTG
CAAATCTCATTGACACAAATTACCCACCCATTCtttattttagttatttt
tgaTAACCTCGTTTAAAATCTGTTTAATTCAACAAATAAAAGTCAAAGTT
TCCATAAATTCTTTTCATTCTAAGTATTTTAATTCAATAGGGATCTTTAG
GTGTGATTTTTGATGGGTTAAAAAATGTGAGTTTTAGTGAGCAGTGGTtg
ctaattttaaatttgactCATTTTTGAAGAATAAATTCTCTAAGTAATTC
AGAATGGAACATTACCACTTTGATCTTTATACACATCTTATCTATCAATA
GGCAGAttatttattttcacttttctaAGTAcgttattggaactaatttc
attgtttttcatgtttttttggcaaaatccaatttttc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00062992-exon-scaffold_375-1491911889:22381..23568 | TCONS_00062992-exon-scaffold_375-1491911889:22381..23568 | Clytia hemisphaerica | exon |
| TCONS_00062992-exon-scaffold_375-1510915933:22381..23568 | TCONS_00062992-exon-scaffold_375-1510915933:22381..23568 | Clytia hemisphaerica | exon |
| TCONS_00062992-exon-scaffold_375-1575043694:22381..23568 | TCONS_00062992-exon-scaffold_375-1575043694:22381..23568 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_375 | supercontig | scaffold_375:22381..23568 . |
Blast
The following BLAST results are available for this feature:
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