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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00063031 ID=TCONS_00063031|Name=TCONS_00063031|organism=Clytia hemisphaerica|type=transcript|length=1035bp
ggcaaaaaaggaaaaacaaattttcatttttatcgtcaaatcatgtagaa
accgtccgatttgtatggcgagccgtcttttctggactttcatttaatga
aagaacaatagaattttcaatagaagtgatcgttgaactttgagtaatca
gaaaagctgttttccatctctttacattcctctgcttgatgtaagttttt
ctgaaaaagtatGTTGTCATCTTACCTTAAAAAGCTTGACAATGTATTTT
TGGAAAGGCTACCCtgattaaaaaatcattttaatttttgaataattatt
cAGTATGTCCGGAAAAAATAGGAACATAATTTATATGGAAAACTAATTAA
ATTACTATAGAAGGGCGGCCAACCCTTAGGATCCGTAGCATCTTTCATGA
AACGCAACCGCATGTAATTGGTTCAAAAGTAGATAGGATTGTACCTGTCt
ttcagccataaaaaaatGGCCTAATTCGCAGACCCCctcttaaaaattca
aaatcctaTCTACTTTCGAACCGATCGCGAAAGATGCTGCagatccaaaa
tttttttaattaatctGTTAAAGATTAGATCCAAGCCAGTGAAGTAAATT
TTTAAGGATTTCCTGCCATTTTCCGGATATGCTGTATTACGGATAATTGT
GTACATGGATATTTTCACCCCTAGAAATAAAGTAATCCTCACTTCTAAGA
GCTATACATCAAAGCTCATGTTCACATTcacgtttttattttgattttct
tgatttttttccttttgttagaatttttagttttctatttttctgtgaac
ttttccaaatttatGATTTTGGTTGTAAATAATAATGATATCGTGTTGGT
TTTTGAGAAGTACTGTAATTATTTTTTATCGAAAATATTCCTTAGTTTTT
TTTATCTAGCATTATTATGAACACTGCGTGATTCACAGGACAAATAAAAT
TTACGTCAACGTCAATTACATTATATGTTACATAAATGTTAGCCTGGACT
CCACTTATCTGGTATTCctatggcgtattggcggc Run BLAST on NCBI transcript from alignment at scaffold_376:93347..94381 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00063031 ID=TCONS_00063031|Name=TCONS_00063031|organism=Clytia hemisphaerica|type=transcript|length=1035bp|location=Sequence derived from alignment at scaffold_376:93347..94381 (Clytia hemisphaerica)
gccgccaatacgccatagGAATACCAGATAAGTGGAGTCCAGGCTAACAT
TTATGTAACATATAATGTAATTGACGTTGACGTAAATTTTATTTGTCCTG
TGAATCACGCAGTGTTCATAATAATGCTAGATAAAAAAAACTAAGGAATA
TTTTCGATAAAAAATAATTACAGTACTTCTCAAAAACCAACACGATATCA
TTATTATTTACAACCAAAATCataaatttggaaaagttcacagaaaaata
gaaaactaaaaattctaacaaaaggaaaaaaatcaagaaaatcaaaataa
aaacgtgAATGTGAACATGAGCTTTGATGTATAGCTCTTAGAAGTGAGGA
TTACTTTATTTCTAGGGGTGAAAATATCCATGTACACAATTATCCGTAAT
ACAGCATATCCGGAAAATGGCAGGAAATCCTTAAAAATTTACTTCACTGG
CTTGGATCTAATCTTTAACagattaattaaaaaaattttggatctGCAGC
ATCTTTCGCGATCGGTTCGAAAGTAGAtaggattttgaatttttaagagG
GGGTCTGCGAATTAGGCCatttttttatggctgaaaGACAGGTACAATCC
TATCTACTTTTGAACCAATTACATGCGGTTGCGTTTCATGAAAGATGCTA
CGGATCCTAAGGGTTGGCCGCCCTTCTATAGTAATTTAATTAGTTTTCCA
TATAAATTATGTTCCTATTTTTTCCGGACATACTgaataattattcaaaa
attaaaatgattttttaatcaGGGTAGCCTTTCCAAAAATACATTGTCAA
GCTTTTTAAGGTAAGATGACAACatactttttcagaaaaacttacatcaa
gcagaggaatgtaaagagatggaaaacagcttttctgattactcaaagtt
caacgatcacttctattgaaaattctattgttctttcattaaatgaaagt
ccagaaaagacggctcgccatacaaatcggacggtttctacatgatttga
cgataaaaatgaaaatttgtttttccttttttgcc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00063031-exon-scaffold_376-1491911889:93347..94381 | TCONS_00063031-exon-scaffold_376-1491911889:93347..94381 | Clytia hemisphaerica | exon |
| TCONS_00063031-exon-scaffold_376-1510915933:93347..94381 | TCONS_00063031-exon-scaffold_376-1510915933:93347..94381 | Clytia hemisphaerica | exon |
| TCONS_00063031-exon-scaffold_376-1575043694:93347..94381 | TCONS_00063031-exon-scaffold_376-1575043694:93347..94381 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_376 | supercontig | scaffold_376:93347..94381 . |
Blast
The following BLAST results are available for this feature:
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