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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00063073 ID=TCONS_00063073|Name=TCONS_00063073|organism=Clytia hemisphaerica|type=transcript|length=936bp
CTACTATCTTATTGCGCGAAACCTCTTGTCCATTACTGACACCGTGTAGC
TTGACACAACTAACCTGCATAGGTGAAAACCGAAAATAATAATCTACACG
TTTGGAGTGTCCAAGAAAGGCAAAGATGATATGAATGACTAGATTGTAGA
TCATTTTAGAGTATTAATTACGACAGATCCAACGCATCTCTTCTCAGCTT
TTACGATAAAATTTAAACacaaatattctaaaaatgagAACCAAGATTAT
CGAGGGTTTAAATGAATGTCATAAAAATACCTTCAAACTCAAGACAAAGG
CGAAACCGAAATTAATCAACACATCCAATCTTCCATGAATGATATTGGTC
TTATTACAATTGCCAGGATCGAGATTTAGACAAATTAAAAAACGATAGAT
ATTGTATTAAACGTATGTAAAGAAGCGATGCTTGATGGTAATTTTATATA
CAGTTGATGTTTTCTAatttcgacgttctactattcgatacccCTTATAC
CCCGAtatcccttattcgatgaaaatctatctctccttgaaaatcgaatt
agagagcgtcgactGTATGGCATCTTGGTATAGATAAATGGCACGGTAGA
TTGAAGCTTTGCAATACACCACCATGGACTAAGAATTACggatttttcaa
agtatttaCAGTTGAGGAACATTCAGTGACGAactttctttagaaaaaaa
accaATATCAACATCATGAGAGATGTGGAATATATTCAGTATTTTTCAGT
ACTAAAGGGTCAAACTTGGCATTCCCCTAATGGGCCTATCTTTGATTGCC
CATATATGTATATCAGAACAAAgatgttttcgaaaatctcaTAGTCATCA
TTGACACGAGCATAAAATTTcaacgaaaatatttttaagtaaCTAAACTA
ATGGGTTGATAATTGTGCTAGAGAGGTAAAGGCTAG Run BLAST on NCBI transcript from alignment at scaffold_379:39020..39955 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00063073 ID=TCONS_00063073|Name=TCONS_00063073|organism=Clytia hemisphaerica|type=transcript|length=936bp|location=Sequence derived from alignment at scaffold_379:39020..39955 (Clytia hemisphaerica)
CTAGCCTTTACCTCTCTAGCACAATTATCAACCCATTAGTTTAGttactt
aaaaatattttcgttgAAATTTTATGCTCGTGTCAATGATGACTAtgaga
ttttcgaaaacatcTTTGTTCTGATATACATATATGGGCAATCAAAGATA
GGCCCATTAGGGGAATGCCAAGTTTGACCCTTTAGTACTGAAAAATACTG
AATATATTCCACATCTCTCATGATGTTGATATtggttttttttctaaaga
aagtTCGTCACTGAATGTTCCTCAACTGtaaatactttgaaaaatccGTA
ATTCTTAGTCCATGGTGGTGTATTGCAAAGCTTCAATCTACCGTGCCATT
TATCTATACCAAGATGCCATACagtcgacgctctctaattcgattttcaa
ggagagatagattttcatcgaataagggataTCGGGGTATAAGgggtatc
gaatagtagaacgtcgaaatTAGAAAACATCAACTGTATATAAAATTACC
ATCAAGCATCGCTTCTTTACATACGTTTAATACAATATCTATCGTTTTTT
AATTTGTCTAAATCTCGATCCTGGCAATTGTAATAAGACCAATATCATTC
ATGGAAGATTGGATGTGTTGATTAATTTCGGTTTCGCCTTTGTCTTGAGT
TTGAAGGTATTTTTATGACATTCATTTAAACCCTCGATAATCTTGGTTct
catttttagaatatttgtGTTTAAATTTTATCGTAAAAGCTGAGAAGAGA
TGCGTTGGATCTGTCGTAATTAATACTCTAAAATGATCTACAATCTAGTC
ATTCATATCATCTTTGCCTTTCTTGGACACTCCAAACGTGTAGATTATTA
TTTTCGGTTTTCACCTATGCAGGTTAGTTGTGTCAAGCTACACGGTGTCA
GTAATGGACAAGAGGTTTCGCGCAATAAGATAGTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00063073-exon-scaffold_379-1491911889:39020..39955 | TCONS_00063073-exon-scaffold_379-1491911889:39020..39955 | Clytia hemisphaerica | exon |
| TCONS_00063073-exon-scaffold_379-1510915933:39020..39955 | TCONS_00063073-exon-scaffold_379-1510915933:39020..39955 | Clytia hemisphaerica | exon |
| TCONS_00063073-exon-scaffold_379-1575043694:39020..39955 | TCONS_00063073-exon-scaffold_379-1575043694:39020..39955 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_379 | supercontig | scaffold_379:39020..39955 . |
Blast
The following BLAST results are available for this feature:
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