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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00063074 ID=TCONS_00063074|Name=TCONS_00063074|organism=Clytia hemisphaerica|type=transcript|length=755bp
GTAACCTCCTATGCTCGATACCGCCGTATCGTCACACCCTTCAAACGGAG
GTTGAACAAAAAACAATACagtattatttgtttgtttatttggaTTTTAT
CTTCGCTTACTTATTTGCATTATTTTATCAACAGGAAGGTCGTCGAAATT
GACGGTAATCTGCAATGCATGTATTTTGGGCCTGAGTTTGCCAATCAGTC
TTACGGATTTGTATGGGACATCTTCATAGCAGTTACTGTAATGgtttatt
tttacatcaaaatcaAGCAAAGACTTGATCACGACGAAAATTCGAACAGA
TTTTCCTTAAATGATGCAAGTAAGCAAAGAAATAGACTTGTTTTGAGGAC
CTTGAAAGCCCTCATAGTTGTCTATGTCATATTTGCATATCCAGGAAGAA
TCTTTGCACTCATTGGGAACGCGCTTTTCTATTATGGTTCAAAAGAGAAT
CCTCCAAACCAAGATTTAATGAACGCTGGTATATCTCTGGTTCATATCAT
TGCAATGTTTCTGTATTTCTCTAACAATATTGTTAATGTGTTTgtatatt
tcaaattgatgcCAGAATTTCGAGCATTCATTCTAACAGTTATAACATTT
GGGAAATTCCAGAAAGGAAACGAAGTTAGTCCACCTAGCGAGGCAACCAA
CAATACGAACGACCAATGCGAATCTAATAATTAAACTGATACAGAACAAT
CACCGACAACATTCGAGGGATTTCAATCATTACAGAGCCCGCCATCCCtt
tatca Run BLAST on NCBI protein sequence of TCONS_00063074-protein >TCONS_00063074-protein ID=TCONS_00063074-protein|Name=TCONS_00063074-protein|organism=Clytia hemisphaerica|type=polypeptide|length=227bp
VTSYARYRRIVTPFKRRLNKKQYSIICLFIWILSSLTYLHYFINRKVVEI
DGNLQCMYFGPEFANQSYGFVWDIFIAVTVMVYFYIKIKQRLDHDENSNR
FSLNDASKQRNRLVLRTLKALIVVYVIFAYPGRIFALIGNALFYYGSKEN
PPNQDLMNAGISLVHIIAMFLYFSNNIVNVFVYFKLMPEFRAFILTVITF
GKFQKGNEVSPPSEATNNTNDQCESNN Run BLAST on NCBI transcript from alignment at scaffold_379:40016..40770 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00063074 ID=TCONS_00063074|Name=TCONS_00063074|organism=Clytia hemisphaerica|type=transcript|length=755bp|location=Sequence derived from alignment at scaffold_379:40016..40770 (Clytia hemisphaerica)
tgataaaGGGATGGCGGGCTCTGTAATGATTGAAATCCCTCGAATGTTGT
CGGTGATTGTTCTGTATCAGTTTAATTATTAGATTCGCATTGGTCGTTCG
TATTGTTGGTTGCCTCGCTAGGTGGACTAACTTCGTTTCCTTTCTGGAAT
TTCCCAAATGTTATAACTGTTAGAATGAATGCTCGAAATTCTGgcatcaa
tttgaaatatacAAACACATTAACAATATTGTTAGAGAAATACAGAAACA
TTGCAATGATATGAACCAGAGATATACCAGCGTTCATTAAATCTTGGTTT
GGAGGATTCTCTTTTGAACCATAATAGAAAAGCGCGTTCCCAATGAGTGC
AAAGATTCTTCCTGGATATGCAAATATGACATAGACAACTATGAGGGCTT
TCAAGGTCCTCAAAACAAGTCTATTTCTTTGCTTACTTGCATCATTTAAG
GAAAATCTGTTCGAATTTTCGTCGTGATCAAGTCTTTGCTtgattttgat
gtaaaaataaacCATTACAGTAACTGCTATGAAGATGTCCCATACAAATC
CGTAAGACTGATTGGCAAACTCAGGCCCAAAATACATGCATTGCAGATTA
CCGTCAATTTCGACGACCTTCCTGTTGATAAAATAATGCAAATAAGTAAG
CGAAGATAAAAtccaaataaacaaacaaataatactGTATTGTTTTTTGT
TCAACCTCCGTTTGAAGGGTGTGACGATACGGCGGTATCGAGCATAGGAG
GTTAC Coding sequence (CDS) from alignment at scaffold_379:40016..40770 >TCONS_00063074 ID=TCONS_00063074|Name=TCONS_00063074|organism=Clytia hemisphaerica|type=CDS|length=684bp|location=Sequence derived from alignment at scaffold_379:40016..40770 (Clytia hemisphaerica)
TTAATTATTAGATTCGCATTGGTCGTTCGTATTGTTGGTTGCCTCGCTAG
GTGGACTAACTTCGTTTCCTTTCTGGAATTTCCCAAATGTTATAACTGTT
AGAATGAATGCTCGAAATTCTGgcatcaatttgaaatatacAAACACATT
AACAATATTGTTAGAGAAATACAGAAACATTGCAATGATATGAACCAGAG
ATATACCAGCGTTCATTAAATCTTGGTTTGGAGGATTCTCTTTTGAACCA
TAATAGAAAAGCGCGTTCCCAATGAGTGCAAAGATTCTTCCTGGATATGC
AAATATGACATAGACAACTATGAGGGCTTTCAAGGTCCTCAAAACAAGTC
TATTTCTTTGCTTACTTGCATCATTTAAGGAAAATCTGTTCGAATTTTCG
TCGTGATCAAGTCTTTGCTtgattttgatgtaaaaataaacCATTACAGT
AACTGCTATGAAGATGTCCCATACAAATCCGTAAGACTGATTGGCAAACT
CAGGCCCAAAATACATGCATTGCAGATTACCGTCAATTTCGACGACCTTC
CTGTTGATAAAATAATGCAAATAAGTAAGCGAAGATAAAAtccaaataaa
caaacaaataatactGTATTGTTTTTTGTTCAACCTCCGTTTGAAGGGTG
TGACGATACGGCGGTATCGAGCATAGGAGGTTAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00063074-exon-scaffold_379-1491911889:40016..40770 | TCONS_00063074-exon-scaffold_379-1491911889:40016..40770 | Clytia hemisphaerica | exon |
| TCONS_00063074-exon-scaffold_379-1510915933:40016..40770 | TCONS_00063074-exon-scaffold_379-1510915933:40016..40770 | Clytia hemisphaerica | exon |
| TCONS_00063074-exon-scaffold_379-1575043694:40016..40770 | TCONS_00063074-exon-scaffold_379-1575043694:40016..40770 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_379 | supercontig | scaffold_379:40016..40770 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007186 | G-protein coupled receptor signaling pathway |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004930 | G-protein coupled receptor activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
Blast
The following BLAST results are available for this feature:
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