TCONS_00063079 (transcript) - C. hemisphaerica

Overview
NameTCONS_00063079
Unique NameTCONS_00063079
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length202

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00063079 ID=TCONS_00063079|Name=TCONS_00063079|organism=Clytia hemisphaerica|type=transcript|length=202bp
CACCAAGATTTTCCTCCGTTGCTTTGCTATAGATATCAATTCAATTCTTC
AGATTTGAAATTTATTCTAATTAAGCTTGTCTTTAAAAAGATCAAGCTAC
AACGGATTTATAAGCAGTAAACatacaaaaaaatctttaaacctTCAGCA
GTTTTTAGAACGTGGCCATTTCTGCACCACGAGCTCACACGTCTGGAGTT
TG
Run BLAST on NCBI

transcript from alignment at scaffold_379:107361..107562

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00063079 ID=TCONS_00063079|Name=TCONS_00063079|organism=Clytia hemisphaerica|type=transcript|length=202bp|location=Sequence derived from alignment at scaffold_379:107361..107562 (Clytia hemisphaerica)
CAAACTCCAGACGTGTGAGCTCGTGGTGCAGAAATGGCCACGTTCTAAAA
ACTGCTGAaggtttaaagatttttttgtatGTTTACTGCTTATAAATCCG
TTGTAGCTTGATCTTTTTAAAGACAAGCTTAATTAGAATAAATTTCAAAT
CTGAAGAATTGAATTGATATCTATAGCAAAGCAACGGAGGAAAATCTTGG
TG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039510XLOC_039510Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063079-exon-scaffold_379-1491911889:107361..107562TCONS_00063079-exon-scaffold_379-1491911889:107361..107562Clytia hemisphaericaexon
TCONS_00063079-exon-scaffold_379-1510915933:107361..107562TCONS_00063079-exon-scaffold_379-1510915933:107361..107562Clytia hemisphaericaexon
TCONS_00063079-exon-scaffold_379-1575043694:107361..107562TCONS_00063079-exon-scaffold_379-1575043694:107361..107562Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_379supercontigscaffold_379:107361..107562 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00063079 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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