TCONS_00063086 (transcript) - C. hemisphaerica

Overview
NameTCONS_00063086
Unique NameTCONS_00063086
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length101

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00063086 ID=TCONS_00063086|Name=TCONS_00063086|organism=Clytia hemisphaerica|type=transcript|length=101bp
ACCTGCAAGATTTGGCGGAGTATCTCGTATTGTATGCAATACCTTCATAT
CTCTTATATTGTGAATATACAAGCTTTCTTCCAAAACAACAAGTAGCCTC
T
Run BLAST on NCBI

transcript from alignment at scaffold_38:190383..190800+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00063086 ID=TCONS_00063086|Name=TCONS_00063086|organism=Clytia hemisphaerica|type=transcript|length=418bp|location=Sequence derived from alignment at scaffold_38:190383..190800+ (Clytia hemisphaerica)
ACCTGCAAGATTTGGCGGAGTATCTCGTATTGTATGCAATACCTAATATA
AAAAGTAAAGAGAACATAATAAATTTACGATAAGCTTCATTTACTCTTAA
CATAATTGGTGACACAGTGTCTTGTTCAGGCAAAAAACTGAACTATCATG
ATTTTTAGTTTATACCGTAAGTTAGTCTAAtgtctttagagataggaata
ataggaaggttggaGTTGCTAATTGAAACTAAgtttctttgcttagcaat
cagTTGAGGTgtccatcagtgattccgaccctcctattattcctatctct
agaGAAGGATGTCGAAACGAAATTAGAATATAGATGTTGATAGTTGCCAT
ATCACATACCTTCATATCTCTTATATTGTGAATATACAAGCTTTCTTCCA
AAACAACAAGTAGCCTCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039514XLOC_039514Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063086-exon-scaffold_38-1491911889:190383..190420TCONS_00063086-exon-scaffold_38-1491911889:190383..190420Clytia hemisphaericaexon
TCONS_00063086-exon-scaffold_38-1510915933:190383..190420TCONS_00063086-exon-scaffold_38-1510915933:190383..190420Clytia hemisphaericaexon
TCONS_00063086-exon-scaffold_38-1575043694:190383..190420TCONS_00063086-exon-scaffold_38-1575043694:190383..190420Clytia hemisphaericaexon
TCONS_00063086-exon-scaffold_38-1491911889:190738..190800TCONS_00063086-exon-scaffold_38-1491911889:190738..190800Clytia hemisphaericaexon
TCONS_00063086-exon-scaffold_38-1510915933:190738..190800TCONS_00063086-exon-scaffold_38-1510915933:190738..190800Clytia hemisphaericaexon
TCONS_00063086-exon-scaffold_38-1575043694:190738..190800TCONS_00063086-exon-scaffold_38-1575043694:190738..190800Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_38supercontigscaffold_38:190383..190800 +
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00063086 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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