TCONS_00063100 (transcript) - C. hemisphaerica

Overview
NameTCONS_00063100
Unique NameTCONS_00063100
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2193

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00063100 ID=TCONS_00063100|Name=TCONS_00063100|organism=Clytia hemisphaerica|type=transcript|length=2193bp
gaccttttttcctTATTTCCTGAAGTATTTGATTCTTCAAACACCAAAAT
GATTTATAACggtgtattttatttttattttcagagacatattataaaaa
gaaaattatgcaTGCATCTTTGGTTTTCATAGTTGCACTTCTAGATATGG
TTATTGCCAAAGAATGCAAAGACAGATTGAGCGCATACCGATGTACATTA
TTCGCAAATCATGGTGTATGCACCAACAAACGACAACTTGCTGAAATCTA
CTGCCAAAAACACTGTGGATTCTGTGGTGAAAAATGTCATTCAATGAGAT
ATGGATGTTGTAATGATGGAAAGACGCCTGCCAAAGGCCCTCATTTTTAT
GGCTGTAAAGAATCATGTGTTGACACTGGAAGGCCGTACTTTTGTCAATC
CATTGTTCGTATCGGGTTCTGTGGACGgcccgattttcaaaagtaTTCGG
ATATGTGTTTGAACTCTTGCAAATTGTGCCGACCTTGTCGTGACGTGAAC
ACAAGAAAATGTAAACGGTTTGCACGTTCAGGAAAGTGTGAAAAGAATAA
AGCTAAGACTTATAACCAATGTCGAAAATCCTGTAATGTTTGTGGTAAAA
AGGACCCTTGTCAAGGCTTCAAGTGCACAAACGCTAACACAAAATGTCGA
GTTGATCATTTAGGAGTACCGTATTGTGGGTGTCGAGCACATTGTGATCC
GGACGACCATTATACCGGAACAGTTTGTGGAAGAGATGGCAAGGAATACA
AGAACAGATGTCGATTGTTTCATGCGAATTNTTGTGGAAGAGATGGCAAG
GAATATAAGAACAGATGTCGATTGTTTCATGCGAATTGTGACTCGGCATA
CCCTGTTACGGTTAGGAATTATGGGAGGTGTCAAAGGCAAAAAAGAAGAT
CAGGTTTTCTTGGAAATTCTTTGTTGGGAAACTCCATAGACAACAACTCG
ATATATCCCTTAAGGAGGTCCCTTGGATGTGAGAACTCAGTCTTTGGATG
CTGTATAGATGGACGCAGCCATGCCAAGGGTCCGAATCTCAAAGGATGTC
ATAAACGAAAATGCAAGGACAAATCGAAACATCTTTGTAGACGTTTCAAA
CCAGACTGCAACAGCCCAAACACGTGGAACAAAAGCTTGATGCGCATGCG
TTGTCCAAAAACGTGTTACTATTGTTCTTAATACAACCAATGGGAAGCGA
GAAAAAANAAAAACGTGTTACTATTGTTCTTAGTACAACCAATGGGAAgc
gagaaaaaattaaataaaaaatttacgaAGAAAGTACAAAGAGGATCCTA
CAAAATACTGACACTAGAATGACGGTCCTAGAACGTCGTTGTAAAACGTG
GAATATATTTAAAAGAACACCAAACGCTCTACAAATTATACCAAGAATAA
CACTTGaatttaaattatgttaaaaggtttttttatttacagTACCAGCT
CTGAAAGGATTTAATTGGCATTAGAACCAGTATGAATATCGAAAAGCTCA
AACAAGTGAATAATATTCATAAATAGCTGGAATCGGTTCAACCCAACACT
AGGCAGGTCGGTCTTGTCATCAATTTATAGCTGAAGATTATTTCTCTGAA
TATGCTAGCCTAAAACCCTTTCCGGTCAACAAGAGTTGTTAGACgaccct
gtctcacagctccggtggaacctttttttcagtggggatagcattcctat
tgaaatccccatggggatagaaattcctttgttccaaggttaaaaaattc
agtggcaaTGGTTttaaattgcaatttttgaacattgaatttcaaatggg
gataaaataaaagtttatttcCGAAgggggctgaaattctaaggtatttt
cccaccgggggtgaaatttttgtcaatctttccattccagtggggctggg
ctcccagcgggtctgtgacacaggggtattgTCTTCAAGAGGAATGTCAA
AGCATGTACATGTCATAAGTCTGTAAAAAAAAACCCGCAATGATAAACAT
ACTGGACAAATATACACgcatttctttttataagaatacactttataaga
atgtccatgatgaaaatggccaaaaaaattaagaatatggtaagaatatc
accatcatggaatttagcaactgaacctaagaatgccatttttaatgcct
tttaaCCTGTAggttgccaatttcgatcttaacctaagaatac
Run BLAST on NCBI

protein sequence of TCONS_00063100-protein

>TCONS_00063100-protein ID=TCONS_00063100-protein|Name=TCONS_00063100-protein|organism=Clytia hemisphaerica|type=polypeptide|length=357bp
MHASLVFIVALLDMVIAKECKDRLSAYRCTLFANHGVCTNKRQLAEIYCQ
KHCGFCGEKCHSMRYGCCNDGKTPAKGPHFYGCKESCVDTGRPYFCQSIV
RIGFCGRPDFQKYSDMCLNSCKLCRPCRDVNTRKCKRFARSGKCEKNKAK
TYNQCRKSCNVCGKKDPCQGFKCTNANTKCRVDHLGVPYCGCRAHCDPDD
HYTGTVCGRDGKEYKNRCRLFHANXCGRDGKEYKNRCRLFHANCDSAYPV
TVRNYGRCQRQKRRSGFLGNSLLGNSIDNNSIYPLRRSLGCENSVFGCCI
DGRSHAKGPNLKGCHKRKCKDKSKHLCRRFKPDCNSPNTWNKSLMRMRCP
KTCYYCS
Run BLAST on NCBI

transcript from alignment at scaffold_38:13724..19659-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00063100 ID=TCONS_00063100|Name=TCONS_00063100|organism=Clytia hemisphaerica|type=transcript|length=5936bp|location=Sequence derived from alignment at scaffold_38:13724..19659- (Clytia hemisphaerica)
GACCTTTTTTCCTTATTTCCTGAAGTATTTGATTCTTCAAACACCAAAAT
GATTTATAACGGTGTATTTTATTTTTATTTTCAGAGACATATTATAAAAA
GAAAATTATGCATGCATCTTTGGTTTTCATAGTTGCACTTCTAGGTAGTT
CTTTTACAACGTTTCTACTTCTGTTCATGAATTGTAAATTTACAATTATT
TCAAAAAAGGGTGTACTGCCCTTTCCGATTAACGGGGTGTGTCAATGAGG
ATAAGAAAAGGGGTGGGAAAGTGAAAAAAGTAAATTTTTCCAGCGGCACA
TTCCCAAATCTTTATTTGTATAAGTAACCCTATCCCCGGAAATATTCCCT
CCTGTTAACCAGGTTCGTACCCTGAGTATCAGAGGTTAAGTTTTCATATA
TGATTTCGACCTGTGCTTTTCACGGTAGTTAAATCACGGTTTAACTTTTA
TTTGATAAGCGCTATAGTATTGGAATGGCTGGGTGGCAGCCCTCTGCCAA
CTGAGTCTACTTTGCTAACAACCACGTGACGTCATGTTCATAATGGCCAT
CGCAACTCCCTGTTCAAGTCGATGCTTTAACTGAAAGCTGACAGGATGAA
ATATTTTTTACCTCCCTCCCTCCCTGCAGTTATGGCTGTAGGCGATCCTC
ACTTATTTATACTAATATTGTATTTATCGGGAAAAATTTTCCCCAAAACT
TATTATTCGAGGATTAGCCATAATTTCATGCCAAACTTATATCTACCGAC
TCAGACTTACTTCTCAGCCGTCTGACTACTTGATTGGTTTCTACCCCTAA
TCTAGGTCATAGGCAAATGGAAAGTTAAATCAGGTCTTTTTAATTCGAGC
CTCAGTAACTCAAATGTTTCCTTAATTTTAACAAGTTTTATGGTTCCTTT
ACTTAGTAATGTCTTATTACAAATTTCATTAACTCGAACAAAGTTGTGCT
CCCAGTGGGTATTCAAGTTATAGAGACTTCGCTGTAGAAAAAATAACCCG
AATCTTCCTAACTATCCATAAACTTTTGTTAGATATGGTTATTGCCAAAG
AATGCAAAGACAGATTGAGCGCATACCGATGTACATTATTCGCAAATCAT
GGTGTATGCACCAACAAACGACAACTTGCTGAAATCTACTGCCAAAAACA
CTGTGGATTCTGTGGTATATTATTCTAGGATTAAACCAACTTATATTAAG
TGATTGATTTGCTTTTGATAATGATGTCTCCCTCGATGAAAATCTTTTTT
CGGAATTTGATTTTGGACTAAGAAACATCACTTGTTAAAGTATGGATTTC
AAGAGTTTCACCTAGCCTTTTTTGATTTGATCACAAATAGAATATTTTTC
TAATTATAATTGTGCTTTTCCAAAAAAAAAAATCGTATAACTCCTGTTGG
GGAGATCCATTTCCGTTGCAAGGGGGTAAGGTTTGATACGTGGCGGAATT
CCATAGGGAGATACAAAAATCTGTCAAAAATAACTGGAATTCCATGGGGG
TAGCTTTTTAAAATCCTACTAAAATTCAGAATTCCAGAACCTGAAAGTGC
CTTGAATTCTAGGGGGTTAGAGCATTTCCAGCCACAGAGGGATAGATCTC
CTCAACAGGGGGTATACGGTTTTTTCTGGAAAAGCTCGTTGTCTGTATAG
CTCGTACTGGTACAAGATTTTCCCGAAGAAAATTGACTTTTCGCTAAATC
ACAAATACCTAATTTTTCAGGTGAAAAATGTCATTCAATGAGATATGGAT
GTTGTAATGATGGAAAGACGCCTGCCAAAGGCCCTCATTTTTATGGCTGT
AAAGGTTAGAGAATTACTTTTACTGAGTTTGATTGTTGGCTTTTTTTTCA
AGAATTAAAAATGCCACTGAGGATTCGTAAGTACGTGCTCTTAGACTCTA
AGAAGCCGAATATTAATGTACACTTTAAAATAAAAGCCTTCAAGGGGTCC
TGTTTCTCGTTTCTATAAACAGGCTAACTCTACGGATGGAGTAGGGCTGT
AGTTTTAAAGAGGAGCCGATATTTATGGCTTTGGTATTCTGTCTCTTTCG
AAAATTTCTCGTACAGTAACAGCTATAAGTTAGATTTTTATTTTTTCGAA
CTTTCTTGAGAGCTTTGTGATTCTATATACTTCACTGTATTTATCATTCA
CAATTTCTCGAGAAATTTACTCCTCATCAAATATGGTAACCACCCTAAAT
ATGCTACTACCCTAATCTCGTCATCGGCTCTTGTAAAACCTTTGTTGTTT
TAATTTCGCCATAGAATCATGTGTTGACACTGGAAGGCCGTACTTTTGTC
AATCCATTGTTCGTATCGGGTTCTGTGGACGGCCCGATTTTCAAAAGTAT
TCGGATATGTGTTTGAACTCTTGCAAATTGTGCCGTGAGTAAAGAATTCT
TTTCTCTGTTTTTTTTAGTTGTTTTCATCTTTTCATTTTCTAAAATTTTT
GAATTTTCTTTCTTCTCAGATTATAGTGCTCTGAATTATCTTTCCAACAG
TATACAAAATGTAATTCGGTAGATTTGAAGCATTTGTTCGAAAGATCGCA
AAACAAGAACTCTTAAAAGCACATTTAAAGCGAACTTTAGGTACTATAGT
TTTTCAAAGAGTTCAGCGTTGCGTTGCGTTCTATTTCACATCCCTTATTT
GACTTTGCAAAAACCAAATTTAAGGAAAAGAAGGAGATATCATGGAATAT
ATCTTTTCGACCGTAGCCGCCAATTGTCGCGCGGGCATTTATTTGTTCGT
TTTACCACCCTAAACTCTATCCAATCCTTTTTTTACACTTTTTTCTATTG
CTTTAATGTGTGAATCAAAGACTGGATGGTTTTAAGGTAGTAAAACAGAC
AAGAAAATGCAATTAGCAGCTACGGTCGTAAATGTGTATTGTTTCCTAGG
AAAAATGATTGTATCTAAGGGTGGATGCAACTGAAAGGATTAGCTGGGTT
ACTTCACAAATTTATTCTTCCTGGTTTTTTCATTCCATTTTGTTTCAATC
TTGTCTCTTCACTTTCCAGGACCTTGTCGTGACGTGAACACAAGAAAATG
TAAACGGTTTGCACGTTCAGGAAAGTGTGAAAAGAATAAAGCTAAGACTT
ATAACCAATGTCGAAAATCCTGTAATGTTTGTGGTAAGACGATATTTTCG
TAAATGTTTAGAGACATATTCATTAAGTTTAAAGCTCAAAAGGCTCAAAG
AGAAATCTTCAAACTTTTTCAAGCAAGAAGAAGTGAAACCTTCAGATTTG
CACCACTTTTCTTTTCCTAGTTATGTCAAGATTGATAACTTATGTTAATA
TTTTGAATCATTTTTCAATTTTCTCTCAAGGTAAAAAGGACCCTTGTCAA
GGCTTCAAGTGCACAAACGCTAACACAAAATGTCGAGTTGATCATTTAGG
AGTACCGTATTGTGGGTGTCGAGCACATTGTGATCCGGACGACCATTATA
CCGGAACAGTTTGTGGAAGAGATGGCAAGGAATACAAGAACAGATGTCGA
TTGTTTCATGCGAATTNTTGTGGAAGAGATGGCAAGGAATATAAGAACAG
ATGTCGATTGTTTCATGCGAATTGTGACTCGGCATACCCTGTTACGGTTA
GGAATTATGGGAGGTGTCAAAGGCAAAAAAGAAGATCAGGTGAAAATTAC
TTACACTTGCTTTACCTTTTTAATTGGATAGTTTTGTATGCAATCCAGCC
GTCGATAATGCACAGACAGATCTAGGCAGCTGGCATCCACTAACAGATTC
ATGCTTCCTACATTAACGGTGATCTTGAGCCCTGCATTTCAGACTAAAAA
AGACACCAATAAATTTACACTCAAAATTTGAAATGTAAAAAGGCCATGCA
AAGGCACGCCCATCGTCGAAGGCCCCATGATTGAACTCATAAACTATTTA
TTGTTAAAGGATAACAAACATTAAAACTTTAATACGGCTTATTGGATTCG
TTTTAGAGTGAAATTATTTTGGATAACTTTGTGAGGGTTCCAACATTTTA
ACATATTTCTATTTCTTCAGGTTTTCTTGGAAATTCTTTGTTGGGAAACT
CCATAGACAACAACTCGATATATCCCTTAAGGAGGTCCCTTGGATGTGAG
AACTCAGTCTTTGGATGCTGTATAGATGGACGCAGCCATGCCAAGGGTCC
GAATCTCAAAGGATGTCATAAACGAAGTAAGTTTTGCTTCATTTTAGCTT
AACATATTTGTAGGTAAAAGCTTCCTTTTCACAAAATCTTCTTTTTTCTT
TGCCTTATTTTTGGAAGAGTTGCTAAAATGTGAGTNTAAGCCTCCTTTTT
ACAAAATCGATCCATTTTTCCTTTACCTCTTTTTTGGAAGAGTTGCTCAA
ATATGTGAGTGATACCGAAAAACTTTTTTGGCCTACTTTTTACTTTCTTA
TAAACCTAGCCTTGTCTTTTCTTTTCTCCAAACGAAGTTGACAATGTAAC
CTCCCATCTGACCTCCGATTTAGGTCTTCAGTTTAATGGTTCTTTTTTGT
ACACACGAGTTATCAAATTTGCTTTATGATAAAATGATAGCGGGTATTAT
TATAGTGGGTAGGAGCGACGGCCAAGTAGTTAAAGACGTCAGCGTCTGGA
GATTCGTGGTTCGAATCCCCGCTCCTCCCAATGTTCCGTTCAGTTCTTAG
ATAGCCGAAGCCGGCTGGCAGTGGACCCCGTGAAAACAATCGAAAGACTG
CCTAAAAGTCCTAGATTACTGGACTATCCACGTAAAATATCGACTCTATC
TATCGACTTTATCTATCTACATTCTTATTTCTTCATTATTTTCATTCTAC
AGAATGCAAGGACAAATCGAAACATCTTTGTAGACGTTTCAAACCAGACT
GCAACAGCCCAAACACGTGGAACAAAAGCTTGATGCGCATGCGTTGTCCA
AAAACGTGTTACTATTGTTCTTAATACAACCAATGGGAAGCGAGAAAAAA
NAAAAACGTGTTACTATTGTTCTTAGTACAACCAATGGGAAGCGAGAAAA
AATTAAATAAAAAATTTACGAAGAAAGTACAAAGAGGATCCTACAAAATA
CTGACACTAGAATGACGGTCCTAGAACGTCGTTGTAAAACGTGGAATATA
TTTAAAAGAACACCAAACGCTCTACAAATTATACCAAGAATAACACTTGA
ATTTAAATTATGTTAAAAGGTTTTTTTATTTACAGTACCAGCTCTGAAAG
GATTTAATTGGCATTAGAACCAGTATGAATATCGAAAAGCTCAAACAAGT
GAATAATATTCATAAATAGCTGGAATCGGTTCAACCCAACACTAGGCAGG
TCGGTCTTGTCATCAATTTATAGCTGAAGATTATTTCTCTGAATATGCTA
GCCTAAAACCCTTTCCGGTCAACAAGAGTTGTTAGACGACCCTGTCTCAC
AGCTCCGGTGGAACCTTTTTTTCAGTGGGGATAGCATTCCTATTGAAATC
CCCATGGGGATAGAAATTCCTTTGTTCCAAGGTTAAAAAATTCAGTGGCA
ATGGTTTTAAATTGCAATTTTTGAACATTGAATTTCAAATGGGGATAAAA
TAAAAGTTTATTTCCGAAGGGGGCTGAAATTCTAAGGTATTTTCCCACCG
GGGGTGAAATTTTTGTCAATCTTTCCATTCCAGTGGGGCTGGGCTCCCAG
CGGGTCTGTGACACAGGGGTATTGTCTTCAAGAGGAATGTCAAAGCATGT
ACATGTCATAAGTCTGTAAAAAAAAACCCGCAATGATAAACATACTGGAC
AAATATACACGCATTTCTTTTTATAAGAATACACTTTATAAGAATGTCCA
TGATGAAAATGGCCAAAAAAATTAAGAATATGGTAAGAATATCACCATCA
TGGAATTTAGCAACTGAACCTAAGAATGCCATTTTTAATGCCTTTTAACC
TGTAGGTTGCCAATTTCGATCTTAACCTAAGAATAC

Coding sequence (CDS) from alignment at scaffold_38:13724..19659-

>TCONS_00063100 ID=TCONS_00063100|Name=TCONS_00063100|organism=Clytia hemisphaerica|type=CDS|length=8592bp|location=Sequence derived from alignment at scaffold_38:13724..19659- (Clytia hemisphaerica)
AATGCAAGGACAAATCGAAACATCTTTGTAGACGTTTCAAACCAGACTGC
AACAGCCCAAACACGTGGAACAAAAGCTTGATGCGCATGCGTTGTCCAAA
AACGTGTTACTATTGTTCTTAAGTTTTCTTGGAAATTCTTTGTTGGGAAA
CTCCATAGACAACAACTCGATATATCCCTTAAGGAGGTCCCTTGGATGTG
AGAACTCAGTCTTTGGATGCTGTATAGATGGACGCAGCCATGCCAAGGGT
CCGAATCTCAAAGGATGTCATAAACGAAGTAAAAAGGACCCTTGTCAAGG
CTTCAAGTGCACAAACGCTAACACAAAATGTCGAGTTGATCATTTAGGAG
TACCGTATTGTGGGTGTCGAGCACATTGTGATCCGGACGACCATTATACC
GGAACAGTTTGTGGAAGAGATGGCAAGGAATACAAGAACAGATGTCGATT
GTTTCATGCGAATTNTTGTGGAAGAGATGGCAAGGAATATAAGAACAGAT
GTCGATTGTTTCATGCGAATTGTGACTCGGCATACCCTGTTACGGTTAGG
AATTATGGGAGGTGTCAAAGGCAAAAAAGAAGATCAGGACCTTGTCGTGA
CGTGAACACAAGAAAATGTAAACGGTTTGCACGTTCAGGAAAGTGTGAAA
AGAATAAAGCTAAGACTTATAACCAATGTCGAAAATCCTGTAATGTTTGT
GAATCATGTGTTGACACTGGAAGGCCGTACTTTTGTCAATCCATTGTTCG
TATCGGGTTCTGTGGACGGCCCGATTTTCAAAAGTATTCGGATATGTGTT
TGAACTCTTGCAAATTGTGCCGTGAAAAATGTCATTCAATGAGATATGGA
TGTTGTAATGATGGAAAGACGCCTGCCAAAGGCCCTCATTTTTATGGCTG
TAAAGATATGGTTATTGCCAAAGAATGCAAAGACAGATTGAGCGCATACC
GATGTACATTATTCGCAAATCATGGTGTATGCACCAACAAACGACAACTT
GCTGAAATCTACTGCCAAAAACACTGTGGATTCTGTGATGCATGCATCTT
TGGTTTTCATAGTTGCACTTCTAGAATGCAAGGACAAATCGAAACATCTT
TGTAGACGTTTCAAACCAGACTGCAACAGCCCAAACACGTGGAACAAAAG
CTTGATGCGCATGCGTTGTCCAAAAACGTGTTACTATTGTTCTTAAGTTT
TCTTGGAAATTCTTTGTTGGGAAACTCCATAGACAACAACTCGATATATC
CCTTAAGGAGGTCCCTTGGATGTGAGAACTCAGTCTTTGGATGCTGTATA
GATGGACGCAGCCATGCCAAGGGTCCGAATCTCAAAGGATGTCATAAACG
AAGTAAAAAGGACCCTTGTCAAGGCTTCAAGTGCACAAACGCTAACACAA
AATGTCGAGTTGATCATTTAGGAGTACCGTATTGTGGGTGTCGAGCACAT
TGTGATCCGGACGACCATTATACCGGAACAGTTTGTGGAAGAGATGGCAA
GGAATACAAGAACAGATGTCGATTGTTTCATGCGAATTNTTGTGGAAGAG
ATGGCAAGGAATATAAGAACAGATGTCGATTGTTTCATGCGAATTGTGAC
TCGGCATACCCTGTTACGGTTAGGAATTATGGGAGGTGTCAAAGGCAAAA
AAGAAGATCAGGACCTTGTCGTGACGTGAACACAAGAAAATGTAAACGGT
TTGCACGTTCAGGAAAGTGTGAAAAGAATAAAGCTAAGACTTATAACCAA
TGTCGAAAATCCTGTAATGTTTGTGAATCATGTGTTGACACTGGAAGGCC
GTACTTTTGTCAATCCATTGTTCGTATCGGGTTCTGTGGACGGCCCGATT
TTCAAAAGTATTCGGATATGTGTTTGAACTCTTGCAAATTGTGCCGTGAA
AAATGTCATTCAATGAGATATGGATGTTGTAATGATGGAAAGACGCCTGC
CAAAGGCCCTCATTTTTATGGCTGTAAAGATATGGTTATTGCCAAAGAAT
GCAAAGACAGATTGAGCGCATACCGATGTACATTATTCGCAAATCATGGT
GTATGCACCAACAAACGACAACTTGCTGAAATCTACTGCCAAAAACACTG
TGGATTCTGTGATGCATGCATCTTTGGTTTTCATAGTTGCACTTCTAGAA
TGCAAGGACAAATCGAAACATCTTTGTAGACGTTTCAAACCAGACTGCAA
CAGCCCAAACACGTGGAACAAAAGCTTGATGCGCATGCGTTGTCCAAAAA
CGTGTTACTATTGTTCTTAAGTTTTCTTGGAAATTCTTTGTTGGGAAACT
CCATAGACAACAACTCGATATATCCCTTAAGGAGGTCCCTTGGATGTGAG
AACTCAGTCTTTGGATGCTGTATAGATGGACGCAGCCATGCCAAGGGTCC
GAATCTCAAAGGATGTCATAAACGAAGTAAAAAGGACCCTTGTCAAGGCT
TCAAGTGCACAAACGCTAACACAAAATGTCGAGTTGATCATTTAGGAGTA
CCGTATTGTGGGTGTCGAGCACATTGTGATCCGGACGACCATTATACCGG
AACAGTTTGTGGAAGAGATGGCAAGGAATACAAGAACAGATGTCGATTGT
TTCATGCGAATTNTTGTGGAAGAGATGGCAAGGAATATAAGAACAGATGT
CGATTGTTTCATGCGAATTGTGACTCGGCATACCCTGTTACGGTTAGGAA
TTATGGGAGGTGTCAAAGGCAAAAAAGAAGATCAGGACCTTGTCGTGACG
TGAACACAAGAAAATGTAAACGGTTTGCACGTTCAGGAAAGTGTGAAAAG
AATAAAGCTAAGACTTATAACCAATGTCGAAAATCCTGTAATGTTTGTGA
ATCATGTGTTGACACTGGAAGGCCGTACTTTTGTCAATCCATTGTTCGTA
TCGGGTTCTGTGGACGGCCCGATTTTCAAAAGTATTCGGATATGTGTTTG
AACTCTTGCAAATTGTGCCGTGAAAAATGTCATTCAATGAGATATGGATG
TTGTAATGATGGAAAGACGCCTGCCAAAGGCCCTCATTTTTATGGCTGTA
AAGATATGGTTATTGCCAAAGAATGCAAAGACAGATTGAGCGCATACCGA
TGTACATTATTCGCAAATCATGGTGTATGCACCAACAAACGACAACTTGC
TGAAATCTACTGCCAAAAACACTGTGGATTCTGTGATGCATGCATCTTTG
GTTTTCATAGTTGCACTTCTAGAATGCAAGGACAAATCGAAACATCTTTG
TAGACGTTTCAAACCAGACTGCAACAGCCCAAACACGTGGAACAAAAGCT
TGATGCGCATGCGTTGTCCAAAAACGTGTTACTATTGTTCTTAAGTTTTC
TTGGAAATTCTTTGTTGGGAAACTCCATAGACAACAACTCGATATATCCC
TTAAGGAGGTCCCTTGGATGTGAGAACTCAGTCTTTGGATGCTGTATAGA
TGGACGCAGCCATGCCAAGGGTCCGAATCTCAAAGGATGTCATAAACGAA
GTAAAAAGGACCCTTGTCAAGGCTTCAAGTGCACAAACGCTAACACAAAA
TGTCGAGTTGATCATTTAGGAGTACCGTATTGTGGGTGTCGAGCACATTG
TGATCCGGACGACCATTATACCGGAACAGTTTGTGGAAGAGATGGCAAGG
AATACAAGAACAGATGTCGATTGTTTCATGCGAATTNTTGTGGAAGAGAT
GGCAAGGAATATAAGAACAGATGTCGATTGTTTCATGCGAATTGTGACTC
GGCATACCCTGTTACGGTTAGGAATTATGGGAGGTGTCAAAGGCAAAAAA
GAAGATCAGGACCTTGTCGTGACGTGAACACAAGAAAATGTAAACGGTTT
GCACGTTCAGGAAAGTGTGAAAAGAATAAAGCTAAGACTTATAACCAATG
TCGAAAATCCTGTAATGTTTGTGAATCATGTGTTGACACTGGAAGGCCGT
ACTTTTGTCAATCCATTGTTCGTATCGGGTTCTGTGGACGGCCCGATTTT
CAAAAGTATTCGGATATGTGTTTGAACTCTTGCAAATTGTGCCGTGAAAA
ATGTCATTCAATGAGATATGGATGTTGTAATGATGGAAAGACGCCTGCCA
AAGGCCCTCATTTTTATGGCTGTAAAGATATGGTTATTGCCAAAGAATGC
AAAGACAGATTGAGCGCATACCGATGTACATTATTCGCAAATCATGGTGT
ATGCACCAACAAACGACAACTTGCTGAAATCTACTGCCAAAAACACTGTG
GATTCTGTGATGCATGCATCTTTGGTTTTCATAGTTGCACTTCTAGAATG
CAAGGACAAATCGAAACATCTTTGTAGACGTTTCAAACCAGACTGCAACA
GCCCAAACACGTGGAACAAAAGCTTGATGCGCATGCGTTGTCCAAAAACG
TGTTACTATTGTTCTTAAGTTTTCTTGGAAATTCTTTGTTGGGAAACTCC
ATAGACAACAACTCGATATATCCCTTAAGGAGGTCCCTTGGATGTGAGAA
CTCAGTCTTTGGATGCTGTATAGATGGACGCAGCCATGCCAAGGGTCCGA
ATCTCAAAGGATGTCATAAACGAAGTAAAAAGGACCCTTGTCAAGGCTTC
AAGTGCACAAACGCTAACACAAAATGTCGAGTTGATCATTTAGGAGTACC
GTATTGTGGGTGTCGAGCACATTGTGATCCGGACGACCATTATACCGGAA
CAGTTTGTGGAAGAGATGGCAAGGAATACAAGAACAGATGTCGATTGTTT
CATGCGAATTNTTGTGGAAGAGATGGCAAGGAATATAAGAACAGATGTCG
ATTGTTTCATGCGAATTGTGACTCGGCATACCCTGTTACGGTTAGGAATT
ATGGGAGGTGTCAAAGGCAAAAAAGAAGATCAGGACCTTGTCGTGACGTG
AACACAAGAAAATGTAAACGGTTTGCACGTTCAGGAAAGTGTGAAAAGAA
TAAAGCTAAGACTTATAACCAATGTCGAAAATCCTGTAATGTTTGTGAAT
CATGTGTTGACACTGGAAGGCCGTACTTTTGTCAATCCATTGTTCGTATC
GGGTTCTGTGGACGGCCCGATTTTCAAAAGTATTCGGATATGTGTTTGAA
CTCTTGCAAATTGTGCCGTGAAAAATGTCATTCAATGAGATATGGATGTT
GTAATGATGGAAAGACGCCTGCCAAAGGCCCTCATTTTTATGGCTGTAAA
GATATGGTTATTGCCAAAGAATGCAAAGACAGATTGAGCGCATACCGATG
TACATTATTCGCAAATCATGGTGTATGCACCAACAAACGACAACTTGCTG
AAATCTACTGCCAAAAACACTGTGGATTCTGTGATGCATGCATCTTTGGT
TTTCATAGTTGCACTTCTAGAATGCAAGGACAAATCGAAACATCTTTGTA
GACGTTTCAAACCAGACTGCAACAGCCCAAACACGTGGAACAAAAGCTTG
ATGCGCATGCGTTGTCCAAAAACGTGTTACTATTGTTCTTAAGTTTTCTT
GGAAATTCTTTGTTGGGAAACTCCATAGACAACAACTCGATATATCCCTT
AAGGAGGTCCCTTGGATGTGAGAACTCAGTCTTTGGATGCTGTATAGATG
GACGCAGCCATGCCAAGGGTCCGAATCTCAAAGGATGTCATAAACGAAGT
AAAAAGGACCCTTGTCAAGGCTTCAAGTGCACAAACGCTAACACAAAATG
TCGAGTTGATCATTTAGGAGTACCGTATTGTGGGTGTCGAGCACATTGTG
ATCCGGACGACCATTATACCGGAACAGTTTGTGGAAGAGATGGCAAGGAA
TACAAGAACAGATGTCGATTGTTTCATGCGAATTNTTGTGGAAGAGATGG
CAAGGAATATAAGAACAGATGTCGATTGTTTCATGCGAATTGTGACTCGG
CATACCCTGTTACGGTTAGGAATTATGGGAGGTGTCAAAGGCAAAAAAGA
AGATCAGGACCTTGTCGTGACGTGAACACAAGAAAATGTAAACGGTTTGC
ACGTTCAGGAAAGTGTGAAAAGAATAAAGCTAAGACTTATAACCAATGTC
GAAAATCCTGTAATGTTTGTGAATCATGTGTTGACACTGGAAGGCCGTAC
TTTTGTCAATCCATTGTTCGTATCGGGTTCTGTGGACGGCCCGATTTTCA
AAAGTATTCGGATATGTGTTTGAACTCTTGCAAATTGTGCCGTGAAAAAT
GTCATTCAATGAGATATGGATGTTGTAATGATGGAAAGACGCCTGCCAAA
GGCCCTCATTTTTATGGCTGTAAAGATATGGTTATTGCCAAAGAATGCAA
AGACAGATTGAGCGCATACCGATGTACATTATTCGCAAATCATGGTGTAT
GCACCAACAAACGACAACTTGCTGAAATCTACTGCCAAAAACACTGTGGA
TTCTGTGATGCATGCATCTTTGGTTTTCATAGTTGCACTTCTAGAATGCA
AGGACAAATCGAAACATCTTTGTAGACGTTTCAAACCAGACTGCAACAGC
CCAAACACGTGGAACAAAAGCTTGATGCGCATGCGTTGTCCAAAAACGTG
TTACTATTGTTCTTAAGTTTTCTTGGAAATTCTTTGTTGGGAAACTCCAT
AGACAACAACTCGATATATCCCTTAAGGAGGTCCCTTGGATGTGAGAACT
CAGTCTTTGGATGCTGTATAGATGGACGCAGCCATGCCAAGGGTCCGAAT
CTCAAAGGATGTCATAAACGAAGTAAAAAGGACCCTTGTCAAGGCTTCAA
GTGCACAAACGCTAACACAAAATGTCGAGTTGATCATTTAGGAGTACCGT
ATTGTGGGTGTCGAGCACATTGTGATCCGGACGACCATTATACCGGAACA
GTTTGTGGAAGAGATGGCAAGGAATACAAGAACAGATGTCGATTGTTTCA
TGCGAATTNTTGTGGAAGAGATGGCAAGGAATATAAGAACAGATGTCGAT
TGTTTCATGCGAATTGTGACTCGGCATACCCTGTTACGGTTAGGAATTAT
GGGAGGTGTCAAAGGCAAAAAAGAAGATCAGGACCTTGTCGTGACGTGAA
CACAAGAAAATGTAAACGGTTTGCACGTTCAGGAAAGTGTGAAAAGAATA
AAGCTAAGACTTATAACCAATGTCGAAAATCCTGTAATGTTTGTGAATCA
TGTGTTGACACTGGAAGGCCGTACTTTTGTCAATCCATTGTTCGTATCGG
GTTCTGTGGACGGCCCGATTTTCAAAAGTATTCGGATATGTGTTTGAACT
CTTGCAAATTGTGCCGTGAAAAATGTCATTCAATGAGATATGGATGTTGT
AATGATGGAAAGACGCCTGCCAAAGGCCCTCATTTTTATGGCTGTAAAGA
TATGGTTATTGCCAAAGAATGCAAAGACAGATTGAGCGCATACCGATGTA
CATTATTCGCAAATCATGGTGTATGCACCAACAAACGACAACTTGCTGAA
ATCTACTGCCAAAAACACTGTGGATTCTGTGATGCATGCATCTTTGGTTT
TCATAGTTGCACTTCTAGAATGCAAGGACAAATCGAAACATCTTTGTAGA
CGTTTCAAACCAGACTGCAACAGCCCAAACACGTGGAACAAAAGCTTGAT
GCGCATGCGTTGTCCAAAAACGTGTTACTATTGTTCTTAAGTTTTCTTGG
AAATTCTTTGTTGGGAAACTCCATAGACAACAACTCGATATATCCCTTAA
GGAGGTCCCTTGGATGTGAGAACTCAGTCTTTGGATGCTGTATAGATGGA
CGCAGCCATGCCAAGGGTCCGAATCTCAAAGGATGTCATAAACGAAGTAA
AAAGGACCCTTGTCAAGGCTTCAAGTGCACAAACGCTAACACAAAATGTC
GAGTTGATCATTTAGGAGTACCGTATTGTGGGTGTCGAGCACATTGTGAT
CCGGACGACCATTATACCGGAACAGTTTGTGGAAGAGATGGCAAGGAATA
CAAGAACAGATGTCGATTGTTTCATGCGAATTNTTGTGGAAGAGATGGCA
AGGAATATAAGAACAGATGTCGATTGTTTCATGCGAATTGTGACTCGGCA
TACCCTGTTACGGTTAGGAATTATGGGAGGTGTCAAAGGCAAAAAAGAAG
ATCAGGACCTTGTCGTGACGTGAACACAAGAAAATGTAAACGGTTTGCAC
GTTCAGGAAAGTGTGAAAAGAATAAAGCTAAGACTTATAACCAATGTCGA
AAATCCTGTAATGTTTGTGAATCATGTGTTGACACTGGAAGGCCGTACTT
TTGTCAATCCATTGTTCGTATCGGGTTCTGTGGACGGCCCGATTTTCAAA
AGTATTCGGATATGTGTTTGAACTCTTGCAAATTGTGCCGTGAAAAATGT
CATTCAATGAGATATGGATGTTGTAATGATGGAAAGACGCCTGCCAAAGG
CCCTCATTTTTATGGCTGTAAAGATATGGTTATTGCCAAAGAATGCAAAG
ACAGATTGAGCGCATACCGATGTACATTATTCGCAAATCATGGTGTATGC
ACCAACAAACGACAACTTGCTGAAATCTACTGCCAAAAACACTGTGGATT
CTGTGATGCATGCATCTTTGGTTTTCATAGTTGCACTTCTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039521XLOC_039521Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063100-exon-scaffold_38-1575043694:19516..19659TCONS_00063100-exon-scaffold_38-1575043694:19516..19659Clytia hemisphaericaexon
TCONS_00063100-exon-scaffold_38-1575043694:18496..18627TCONS_00063100-exon-scaffold_38-1575043694:18496..18627Clytia hemisphaericaexon
TCONS_00063100-exon-scaffold_38-1575043694:17856..17939TCONS_00063100-exon-scaffold_38-1575043694:17856..17939Clytia hemisphaericaexon
TCONS_00063100-exon-scaffold_38-1575043694:17276..17395TCONS_00063100-exon-scaffold_38-1575043694:17276..17395Clytia hemisphaericaexon
TCONS_00063100-exon-scaffold_38-1575043694:16527..16640TCONS_00063100-exon-scaffold_38-1575043694:16527..16640Clytia hemisphaericaexon
TCONS_00063100-exon-scaffold_38-1575043694:16021..16329TCONS_00063100-exon-scaffold_38-1575043694:16021..16329Clytia hemisphaericaexon
TCONS_00063100-exon-scaffold_38-1575043694:15484..15639TCONS_00063100-exon-scaffold_38-1575043694:15484..15639Clytia hemisphaericaexon
TCONS_00063100-exon-scaffold_38-1575043694:13724..14857TCONS_00063100-exon-scaffold_38-1575043694:13724..14857Clytia hemisphaericaexon
TCONS_00063100-exon-scaffold_38-1510915933:19516..19659TCONS_00063100-exon-scaffold_38-1510915933:19516..19659Clytia hemisphaericaexon
TCONS_00063100-exon-scaffold_38-1510915933:18496..18627TCONS_00063100-exon-scaffold_38-1510915933:18496..18627Clytia hemisphaericaexon
TCONS_00063100-exon-scaffold_38-1510915933:17856..17939TCONS_00063100-exon-scaffold_38-1510915933:17856..17939Clytia hemisphaericaexon
TCONS_00063100-exon-scaffold_38-1510915933:17276..17395TCONS_00063100-exon-scaffold_38-1510915933:17276..17395Clytia hemisphaericaexon
TCONS_00063100-exon-scaffold_38-1510915933:16527..16640TCONS_00063100-exon-scaffold_38-1510915933:16527..16640Clytia hemisphaericaexon
TCONS_00063100-exon-scaffold_38-1510915933:16021..16329TCONS_00063100-exon-scaffold_38-1510915933:16021..16329Clytia hemisphaericaexon
TCONS_00063100-exon-scaffold_38-1510915933:15484..15639TCONS_00063100-exon-scaffold_38-1510915933:15484..15639Clytia hemisphaericaexon
TCONS_00063100-exon-scaffold_38-1510915933:13724..14857TCONS_00063100-exon-scaffold_38-1510915933:13724..14857Clytia hemisphaericaexon
TCONS_00063100-exon-scaffold_38-1491911889:19516..19659TCONS_00063100-exon-scaffold_38-1491911889:19516..19659Clytia hemisphaericaexon
TCONS_00063100-exon-scaffold_38-1491911889:18496..18627TCONS_00063100-exon-scaffold_38-1491911889:18496..18627Clytia hemisphaericaexon
TCONS_00063100-exon-scaffold_38-1491911889:17856..17939TCONS_00063100-exon-scaffold_38-1491911889:17856..17939Clytia hemisphaericaexon
TCONS_00063100-exon-scaffold_38-1491911889:17276..17395TCONS_00063100-exon-scaffold_38-1491911889:17276..17395Clytia hemisphaericaexon
TCONS_00063100-exon-scaffold_38-1491911889:16527..16640TCONS_00063100-exon-scaffold_38-1491911889:16527..16640Clytia hemisphaericaexon
TCONS_00063100-exon-scaffold_38-1491911889:16021..16329TCONS_00063100-exon-scaffold_38-1491911889:16021..16329Clytia hemisphaericaexon
TCONS_00063100-exon-scaffold_38-1491911889:15484..15639TCONS_00063100-exon-scaffold_38-1491911889:15484..15639Clytia hemisphaericaexon
TCONS_00063100-exon-scaffold_38-1491911889:13724..14857TCONS_00063100-exon-scaffold_38-1491911889:13724..14857Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063100-proteinTCONS_00063100-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_38supercontigscaffold_38:13724..19659 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0745753	0.053147	0.0657039	0.0922681	0.611289	0.332328	0.198421	0.322728	0.227569	0.374062	0.351047	0.235211	0.264077	0.188719	0.15479	0.174245	6.10941	6.90426	0.223254	0.0804495	23.5016	22.3218	8.8066	11.7895	22.311	25.1136	0.304145	0.265336	0.190971	0.2769
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003582ShKT_dom
IPR002350Kazal_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00063100 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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