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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00063213 ID=TCONS_00063213|Name=TCONS_00063213|organism=Clytia hemisphaerica|type=transcript|length=1389bp
TATTctgaacaaataagattccccgttcgagttcggATCAGCGACTGTAT
CAACTAATTATCCTCCTCGATTGTTTAGGTCAGTTTTCATTCGATTCAGT
CACTTCGCCGTCCTTAAAAGGGTTAATACGTAAACTTGCTAttaaagccc
cccccccctgtttacCAAGAATTTTTAAAGGGTTACatggaaaatattaa
aattgcAAATTTAAGACATCGATTTTATAccccttttttcttttctattt
tgaaatttaattttttgacgcttttttgctttttttttggtttatttttt
acagaatttcaaagtAACGGTTAAAAAAATCAGATAGgtgctttttttaa
atatacttaTTACTATTCAGGATAAAGaaggcattttgtaatttttttag
taTGGAATATTTTTGTAGTAAGAAGGGAAGAATTTTCCTTTAAAGCGCAT
CTCTATAAAACTCGATGTCAACCTCGAAGCATCGTGTTTAGTAATTTCTG
ATGGAAAGCAAACTCTTTCAATTCTTAAATTCTTTTTCGAGCCCAGACTT
ATTCCATTGCAAAGCTGCTcttttttttgttcgaaaaatCGAAATGATTC
GATTCTTTTGGTTGTCGATGAAATCTTGCTTTATCATTGTTAGCTTTTAT
CTGCCATCATgggatatttttttttgtatttttctaatAAATTAGATCGC
GCTTAAAAGGCTATCTtcatttgtacacatttttttattgatagtAAATT
GTATACATCGAAGGACGTGTCTTTCACCGGGATGGAAAGCTTTTACTTGT
ACCAGAtgggtcattccattttatatccatgcaGGGGTgaacgaacattt
ccagggggtaaccggagaagaatttccagaaGGTCTAAAtgagtattttt
ttaatttttccttccAGGAGGTAAAAAGCTTCTTTTGCTAATTTTGCCAC
CAGGAAGGATCACGTCAAAGTgtctgaagtcgttgcattcACATTCTCAA
AGACAACGAAgatcatgttcagacgttacaaTTCCGTtccgctccgaaac
gaaatgaagccattctatttgttacattcaagtgttacgtcacttctaac
caatagaatggctttatTTCATTTCGGAGCGGAACGGAAttgtcacgtgc
gaacatggtcgagattttgacgtcatttcttcgTAAATTCATTACTAGAC
CCCTTTAAAGCCGTCCGCTCAGTTAAGAGTTGATAGGTGTAATACTTGCG
CAgtactttattttttataatagcATCCCTCTGGTACATGTTTTTCATCT
ATCTGtccaaaaaattgtattttgtccAATAGATTGATGGTTGTGGAAGA
ATTATTATTAAAAGATAATATTgttaatttcaatttatt Run BLAST on NCBI transcript from alignment at scaffold_384:43215..44603 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00063213 ID=TCONS_00063213|Name=TCONS_00063213|organism=Clytia hemisphaerica|type=transcript|length=1389bp|location=Sequence derived from alignment at scaffold_384:43215..44603 (Clytia hemisphaerica)
aataaattgaaattaacAATATTATCTTTTAATAATAATTCTTCCACAAC
CATCAATCTATTggacaaaatacaattttttggaCAGATAGATGAAAAAC
ATGTACCAGAGGGATgctattataaaaaataaagtacTGCGCAAGTATTA
CACCTATCAACTCTTAACTGAGCGGACGGCTTTAAAGGGGTCTAGTAATG
AATTTAcgaagaaatgacgtcaaaatctcgaccatgttcgcacgtgacaa
TTCCGTTCCGCTCCGAAATGAAataaagccattctattggttagaagtga
cgtaacacttgaatgtaacaaatagaatggcttcatttcgtttcggagcg
gaACGGAAttgtaacgtctgaacatgatcTTCGTTGTCTTTGAGAATGTg
aatgcaacgacttcagacACTTTGACGTGATCCTTCCTGGTGGCAAAATT
AGCAAAAGAAGCTTTTTACCTCCTggaaggaaaaattaaaaaaatactca
TTTAGACCttctggaaattcttctccggttaccccctggaaatgttcgtt
cACCCCtgcatggatataaaatggaatgacccaTCTGGTACAAGTAAAAG
CTTTCCATCCCGGTGAAAGACACGTCCTTCGATGTATACAATTTactatc
aataaaaaaatgtgtacaaatgaAGATAGCCTTTTAAGCGCGATCTAATT
TattagaaaaatacaaaaaaaaatatcccATGATGGCAGATAAAAGCTAA
CAATGATAAAGCAAGATTTCATCGACAACCAAAAGAATCGAATCATTTCG
atttttcgaacaaaaaaaagAGCAGCTTTGCAATGGAATAAGTCTGGGCT
CGAAAAAGAATTTAAGAATTGAAAGAGTTTGCTTTCCATCAGAAATTACT
AAACACGATGCTTCGAGGTTGACATCGAGTTTTATAGAGATGCGCTTTAA
AGGAAAATTCTTCCCTTCTTACTACAAAAATATTCCAtactaaaaaaatt
acaaaatgccttCTTTATCCTGAATAGTAAtaagtatatttaaaaaaagc
acCTATCTGATTTTTTTAACCGTTactttgaaattctgtaaaaaataaac
caaaaaaaaagcaaaaaagcgtcaaaaaattaaatttcaaaatagaaaag
aaaaaaggggTATAAAATCGATGTCTTAAATTTgcaattttaatattttc
catGTAACCCTTTAAAAATTCTTGgtaaacagggggggggggctttaaTA
GCAAGTTTACGTATTAACCCTTTTAAGGACGGCGAAGTGACTGAATCGAA
TGAAAACTGACCTAAACAATCGAGGAGGATAATTAGTTGATACAGTCGCT
GATccgaactcgaacggggaatcttatttgttcagAATA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00063213-exon-scaffold_384-1491911889:43215..44603 | TCONS_00063213-exon-scaffold_384-1491911889:43215..44603 | Clytia hemisphaerica | exon |
| TCONS_00063213-exon-scaffold_384-1510915933:43215..44603 | TCONS_00063213-exon-scaffold_384-1510915933:43215..44603 | Clytia hemisphaerica | exon |
| TCONS_00063213-exon-scaffold_384-1575043694:43215..44603 | TCONS_00063213-exon-scaffold_384-1575043694:43215..44603 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_384 | supercontig | scaffold_384:43215..44603 . |
Blast
The following BLAST results are available for this feature:
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