TCONS_00063267 (transcript) - C. hemisphaerica

Overview
NameTCONS_00063267
Unique NameTCONS_00063267
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3013

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00063267 ID=TCONS_00063267|Name=TCONS_00063267|organism=Clytia hemisphaerica|type=transcript|length=3013bp
CGAGTTTCAAGCAAAGCCTTTCAAGTAGGATCATGAAAAAACTAAAACGA
AGGAGAAAAACCACCTCGAACTCAGTCCTTTAAAGCTAAGCAAGACTTTT
CTCCACCATCCAAACTCAAATTTGCTAAATCATTGTAAATCCAAGATGGC
GGCGGTGGACTACTATCAAAACACCTCTGTAGATTCTCTATCAAGTTTAA
GTAACATAGGGAGACACagtttagaaaaattttcacgTTCCATCGAAGTT
CCTGGTGCTGACTTTGCCCTACCAAACACAAATGATCCTGTTGGATTTTT
GAACGAATGTACGAATGgcaaaaacaaaattgatatCAAATTCAACCATG
GAACCACAACGCTAGCCTTTAAATTTCAACATGGTGTCATTGTAGCTGTT
GATTCTCGTGCGTCTGCTGGTTCCTATATCGCATCTGGAACCGTGAAGAA
AGTTATCGAAATCAACCCATATCTTCTTGGTACAATGGCTGGCGGTGCTG
CTGATTGTTCTTTTTGGGAGCGTCTCTTAGCTAAAGAATGCAGATTATAT
CAATTAAGAAATAAGGAACGTATATCTGTGGCGgcagcatccaaaatttt
agcAAATATGGTCTACCAATACAAAGGAATGGGTCTTAGTATGGGTACCA
TGATTTGTGGTTGGgataaaaagGGACCTGGTCTATATTATGTTGATGAC
GAAGGAAGCAGATACAAGAACGATTTATTTTCTGTCGGCTCTGGCTCCAC
ATACGCGTACGGTGTTTTAGACGCCAACCACCGATACGATTTATCCGTTG
AAGAGGCTTATGACTTGGGACAACGAGCTATCTACCATGCTACACATCGA
GACGCTGCGTCCGGTGGTGTGGTCAATTTATACCACATGCAAGAAACTGG
ATGGATTAAAGTTTCACAAACAGACGTTACTGAGCTACATTATCGATATA
AAGAGGAAGCTTAAAGATTTCATCTCCTACCAACCCACTAAAACCACTGT
TCATCAAAATCTCTTCTCACCAATTGTTGAGGTGAGTGAGAGATTCTTTA
ACCATCTGAGAATTTCGGGATCCGAATTTTCTCAATTCAAACCAGTTCAA
ACACCGACACCTTTGAAAGACgttgtatcttttttttttctaaataattt
tcAGAAATATTTAAACTGTAAACTTATAAAGATTTTAAgctgttgatttt
ttttttcgtttcacTTGAAAAGGAGTTATTTTTCGGATACTTTATACCAT
AAATACTATGCCTTTCATCTTGTTTGTTACTATTTGGGTAGAGTTAAGTA
TTATTGTCATTTATGAGAAATGAGTTATACCCCGTTGATAACtgacccat
ttcgatgcatcggagggcatatTTATCTATAtcgaaaatatttctttgct
aTCATATACTCAAACTGCACCATACTCAAACTGCACCATACTATTggaat
cgaaaaaaaaacatacccaAGGAAAGAATAAATGGTATAGAATTTGATGG
TCATTGATTATCTATATTTAcctaaagtaaaagaaaatcattttacAACT
ATTTCTACGGTGCGAAAATATCATCTCCTCGCAAGGGCGGCGTCATTGGG
TCGTGTTCCCTTACTTTTCTGTACCCTTCTTTTTCCTTCCGTCGTCTTTG
TCCGTCATCCTTCGTTTGCCCACCCCTTCCAGGGGGTAGAGCGGGTGTTT
CTTCGCCTCCTCTCCCTGGTAAAGGTGGTGCTCGGTGACCTTGCTTCCCT
CTTGCGGGTATTGAGGGTTCTTTGATCTCCGAAGTTTCTCTTCCGGGAAT
TCCTGGTGGCGATCGGTGGCTGTGCTTTCCTCTTCCGTGTATTGACGGTT
GCTCTTGGATCGCGGACGTCTCTCTTCCGGGAATTCCTGGCGGTGCTCGG
TTGCCTTGTTTTCCTCTCCCCGGTTTTGACGGTTGCTCGTTGATCACCGA
AGTCTCTCTTCCGGGAATCCCTGGCGGTGCTCGGCTGCCGTGCTTTCCTC
TTCCGGGTATTGAAGGTTGCTCTTGGATTTCCGAAATCTCTCTTCCAGGA
ATTCCTGGTGGGGCTCGGGAACCCTTCTTTTCCCTTCCATCTACCTCTGG
CGAGTCTTCAAAGTCCGAAGTCTCCTTTTTCATCTTATGTCGtgactttt
ttctatttttctcttCGTGTGAGCTATCCTTCTTCGATTTCTGGTTGGAG
TCATCTTCCTCATTCGTTTCTTGGCTGTCTTCTTTACGTCGTCTTTTGGA
ACGTCCACCGTTCTTTTTAGTATTGTTATTGCTTTCATCGTCTTTTCTCG
TTCCTCtaacacctttttctatttCGTCTTCCTCTTGATCACCACTCAGT
TTCCTGAAATGTCAAAATGATTTATATTCAAGACCAACTACCTTGGAACC
AGATGTAGACAATAATGCTATATGTTATCTTGCGTTAAGGGGACGCCTCA
ATAGTCTGTCTGTCTGTTTCAATAATAATAATCGGGGACaaagttttttt
atctttgCAGCAGATCGGTCAAATTAGGATTTGATTAGGAAAAAATGAAG
TGCAAAGTTTACATCCGGAAAAGACAGCAGTGGTAGATTTTGATGTGAAG
AACTCCTTTATCTACTGCAATCCCCTAATTTATCCACTCATATTCactgt
tttttaaaaatgttcgaCAGTGTAGAAACTTGGAATTCGAGGCTCCTTTC
GGCTTGAATGGATCTGGGAGGGATCACCTCGAAATATTCCCAATTATGAT
TACTCActtttcgaaaacaaatttCCATAGAGCAAAGATGACGGCACATG
AAATACCGATTGAACATATTGCGCCGATTGCTTTTGCGGAACCAGATTCA
AGAGGATCCTTTGGTTTAGGTGTTGTcggtgttgttgttgttgtcggtGT
TGTCGGTGTtgtcgttgtcgttgttgtcGTAGTGGTagtggtggtcgttg
ttgtggttGTGGTTGTTGTTGGAGCTAAATAGGAAATAAGATTAATATAG
CCGAAGACTAGAG
Run BLAST on NCBI

transcript from alignment at scaffold_385:23514..37071-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00063267 ID=TCONS_00063267|Name=TCONS_00063267|organism=Clytia hemisphaerica|type=transcript|length=13558bp|location=Sequence derived from alignment at scaffold_385:23514..37071- (Clytia hemisphaerica)
CGAGTTTCAAGCAAAGCCTTTCAAGTAGGATCATGAAAAAACTAAAACGA
AGGAGAAAAACCACCTCGAACTCAGTCCTTTAAAGCTAAGCAAGACTTTT
CTCCACCATCCAAACTCAAATTTGCTAAATCATTGTAAATCCAAGATGGC
GGCGGTGGACTACTATCAAAACACCTCTGTAGATTCTCTATCAAGTTTAA
GTAACATAGGGAGACACAGTTTAGAAAAATTTTCACGTTCCATCGAAGTT
CCTGGTGCTGACTTTGCCCTACCAAACACAAATGATGTAAGTTTCACTAA
CCTTTACCATAGGTAGGGTGGACATGACAAAATTTCCCCCTCAATTTTTG
AAAACCAAACTTAAGTTTATTTGAAAGTCATTATACCTTTGTGAGAAAAA
TGAGTGGTCAGTTATTTAAACTGGTTAAGTATTTTAAAAGTTATTTCATT
TTCAAAACAAAAATCACCTTTCCAAAGAATCGTCTGCTTACCCCGGGGCC
GCCAGCAAGAAATAATTTTTGGAAAGCACCAAAAAATGATGGATGATAAA
ATCTACTAGCCTTCCGTGCTGGCGCAGTTTTGATATCAGCCTGATGACTG
TTAAACTTTGGCTTATTGCTAATGAGCTTGAAAAAATAGCTAAAAACATA
CCGTCAACTGCTCTAACTGGGGACGATTGTTCGAATCATAAAAAAATCTG
GTTGATATCTGGCCTGTATTTTCACGTACTGTTATATCTCATTGACAACA
AATTTGTTTTGATACTCAACCAAGTTTATCTAATCATACTTCTTCGTTCT
TCTTAAGCTCGTGGTCCACTTAGCTCTTTTCCAGGCGTAATTAATTACGA
CCCTGGACACCTCCGTACATTGTGCGGTGGAGTCCAGTGGGCGTCCGTTG
GGTGTACGGTGGTATTTTAGGTTAGACCGAAAACACTGTACAACACCACC
GTACAGAATCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNCCCCGGGCTGCCTTTTTTCGATGAAT
CGCGTGTCATGTCAAAATATGGTTAAAAGATACGTCACCCGGGAGGGATA
GAGTCAAACTTTGAAGAGAATTCTTGCCTTTAATTTTGATTTCATCGTGT
TTAAGCCACCTTCCCAACATCTCAAAGGACTTTAAATACGTTCAGCAAAC
AGCTAAACCGGCGTGCGACGCCGGGTACCGGCTAGTATTTATTAATCAGA
CAGGAAACTAAGATTTTTTCCTCAGTAAAGTCAAAACAAACTGCGAGCAA
GCTACCTGACCTTGAAACAACATGTTTAAAATGCATTTTTGCACTGAAAT
ATTTGAAACAAAAGCCTATGTTTATTGAAGGAGTGCAGACTTTATTCAAC
TAAGAGGGCTCAAATGTTTTAAGAGCAAGGTTTGGTGGTTTGCACCCTCA
TCTGCGATTTTTTACTTGAGCATAAGCTTTATTACAATACAATGCCTTTC
CCTGTTAATCTGCTATTCTTTTGTTTCGTTTAAGCAAAAGTGAAAAGAAA
TTATGAACGCTGACAACTGCTGACAACCATTTTCTAACTTTTCATTACAA
AATATTCTAAATAATCTGTCTTGCCATTCTCTTTCATCTGCTATCATCGT
CTATTTTTTATCTATTCAACTTTTGGAAGATCTTAAGATGAGTTTTTTGC
AGTGCCGTAGGAAGCAATTTCATATTGGGGGTTAGTGACACTGTGAGGAC
CAAACCATCAACCATGGTTTGGCCCAAGGGGAAAATTTTTAAAATTATTT
TGAGCTCTAGATTGCTTGAAAATGCACTCAGAACAAAAGGCTTTTGAGAA
CAAATTAAAAAAGAAAAACTTTGCATTTTGCAAAATAACCATTTTTGAAA
AAATTAGGGCTCAATAGTTGAGGCTCTTAACTATTATGACTANNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNGAAAATATAAAATCGTTCTGTAAATTACA
CAATACTATTATGCATTATGCAATATGCATTATGTTTTATGCATTTTGTA
CCTGCCGATTCAGGAAAGTTATTTACATCGATGCATTCATTAATTCGATT
AGAAAGATCATTGATAATGTGGGGTGCTATAATTTTTAGGATCAGTGTTG
GAATACTGTTTGGTCCAACAGATTTGGAATCTGATAATTTGTTAATGACA
TTGAGAACTTTTTCATGTGAAGGATCTGCAAGCTCAAAAGAAACTGGATT
TGGGTTTGTCAAGAATTCATCAAAGTTTTTTTCTGTAGGAATTATTTTAG
ATTTGGTTTTATCTGCTATACCTGCATAAAAATTATTAAAGATCTCAGCG
AGTTTATCGTCACCTTCATGTTGTTTGTTATCATGAATTAAAACTTTAGG
AAGACTTTGTTTAGATTTAGTACCAATAATTTCCCTAATGCCTTGCCAGG
TTTTTTGGAGATTTGTTTTATGTTGACAGAAACCTCGCATGGTTCTAAGA
TTATAGAGCTTGGTACATACAGGTAGATTAGTCTGACACAGAATGTTATA
AACAGCCTGTGTGTGATGACAGACTTTCTGAACTTTGGAAACCCAGGCAA
ACAACACACATAAACAAACTTACCCATAAAAACTACTCACAAGCTCCTAA
AGACTTTCAAAACTACTAAAAGCCAGTTTAAAACATCAGGCACATGTATT
TAGCACGTGCGTTTGCGTAGGCCAGACGTAATCGAACTTTGTCGAACTTA
TTCGAACAACAAAAGTTCGATTAAATTCTTTAATCGAACTTTTCAAAAGT
TGCTAAAATTGTGAGTATTCGATTAAGTTCGACAAAACATATTACGTTCG
ACAAAGTTTGACAACGAGAAATGTTCGACTAAAAACTCCGTTCGATAAAG
TTCGACAACAAGAAAGGTTTGACAAATTCGACAAATAACAAGAGTTCGAC
AACAAAAAATGACCTCCTTTGGGTACTACCGTGGACGGCCCCTGGGGGTC
CCGGCCGAGGTCCGGGGGGGTCCAATCGGTGCCCACTGGTCAGGGGGATG
TGAGTGAGGGTACACGCCTGCACCAGCGGGGGTGCTTCATAGTTCCTCAA
AGTGTCGTCAAAGGCCGGCANAGGGATGTGAGGGTACACGCCTGCACCAG
CGGGGGTGCTTCAATGTTCCTCAAAGTGTCGTCAAAGGCCGGCAAAAAGT
GCAATCGAATTACGCGCAAGTGGAGCGGCCTTCAGTTGCTCGGATTTTCT
CTAATTTTTGTTCAATTAAACTTGACAAAGTTGGATTAAGTTCGATTAGT
TCGATTAAGTTCGAATAATGTAATTGAACTAATCGAACTGTTGAGGTCTC
TTTAAGAAAAGTCCGATTAAGTTCGATTTCAGTAATCGAACTTAATCGAA
CTTTGTATTTTGAGAAATTTGTGAGTATTCGATTAAAGTTCGACAACTGA
ACTTAGTGGAACATTAATCGGCCAACAAAGTTCAATTAAGTTCGACAAAG
TTCGATTAAAAATACCGGAATTTGTTGAACTGAAATTTTTAGTAGGGGTG
GCCAACATGGTTCCCTTGCTCATATCAGGGGGGGGGGGGGGGGGGGGGAA
NCGTTTGGTTTGGGAACGCGAAAACGAACGAGAACCATCCATGTCTAAAC
TTTTGAATATATCTCCAGAACTAACAGATTTTTTTAAATTCTATAAAAAG
GTCCAAGTTCCTGAATAGTTTTACTACTCTTGGCGAACCAGACTGACCTC
TGTAGCCTCGAGGGAGGTAGGTTTTTAGTCCAGGGAAAGGGCTCATTAGA
TTGCGTCCCTTGGTTATTGGTTATGTTTAGTTATGAAAACAGCGAAAGGG
AAGAGATATTGAAGAATTCAAAAGCAACAAGAATTGAAATAGTTGAACAG
ATTGAATGNGCGTTTGGTTTGGGAACGCGAAAACGAACGAGAACCATCCA
TGTCTAAACTTTTGAATATATCTCCAGAACTAACAGATTTTTTTAAATTC
TTTAAAAAGGTCCAAGTTCCTGAATAGTTTTACTACTCTTGGCGAACCAG
ACTGACCTCTGTAGCCTCAAGGGAGGTAGGTTTTTAGTCCAGGGAAAGGG
CTCATTAGATTGCGTCCCTTAGGTTATGTTTAGTTATGAAAACAGCAAAA
GGGAAGAGATATTGAAGAATTCAAAAGCAACAAGTATTGAAATAGTTGAA
CAGATTGAATGATTCATAGACTAAACGAAAGACTTATCAATTGTAAAACA
TACAGAATATCACCAAAGAATCAGTTAAATACCAGAAAAAACAACCCGAA
GGTCAGCATCCTTCTTAGTTTTTAAATAAAAAACAACAAGAAAGTGTTCA
TAATTTGGAATATTTCGATGACTTCTATCTCATCATTGTCTACCATAAAC
TATAAATACATTTCAAAAATCTACTTTTATTCTAAAAATCTGTACAGCAG
TAAAATGATAATTAAAAACGTTAATGAGTTATAAAATGTACAAGGGAAAT
AAAATTGTAAGCTAAAAAATGACTAAATGAAAGGAACAAAAGATTGTCAA
TAGCCAGGGGTCTATCCAAACAATTGAAGTTCTTTTGAAGCTTTCAACCC
GTCATTAATCTTTGGTTTTAGTTTTTTAATGTAAAATGCTTCTAAAAAGG
CCAATTGTGACCAATTATCATTCGAATCTAAGATTTTACAATTATTCAAA
ACAGCGTTCAAAATGTGTTCTTTATGGTTAATCCCATGTGATTCTCCAAA
CAATTGTGCGAGATTAATGTTTGGAACTAACAGATTTTTTGAAATTCTGT
AAATAGGTCCAAGTTCCTGAATAGTTTTACTACTGTAACTTGGTAAGTAA
ATGAGATAAGATAAGATAAAACCTTAAAATCAACCAGAATTTACAACCTT
TCGTCTAAAGCAAAAGACATGCTTTTCTCGCCGCCATCTTGTTTTAGAAT
GATAATTATTTTCGGTTCCAGTTCCCACGGTCTTTTTTCATCCAATCAGA
TCGCGCAATTTCACTTTCGCTTTCTCTAGTCCAATAAGACTGCAGGATTT
GAGTCATGTGACATTTCAATTGAAAGACCAGCGCAGAATAAAATAGAAAT
ACAGGGGTCACACTACTGCAGGGATCGAATTAGCGTATCACATTTCGCAA
TTCGCGATGCGTTTTTAGATTGAACCAAATCGATCTGCCATGTGTGTCCC
ACTTGGTTAGGGTGTGTCATTGTTCAATCGAGTAAATAAGTTTTAACCAA
TGTCTAAACTTTTCACTATATCTAAAGAATTAGTTAACCTTTTTAAGATC
TGTGAACAACTCTTTACTCCCAAATAGTTCTAGAATAAAACCTGAAAAAA
CCAAGATAATTGATAAAATATTCAATCCTTAAATAAAGATTGAAGATGAA
AATTCACGAAGAACAAAAAACCTTAGCAAAGAAATTGCCTTACACATTTT
TCCATTTAAAATAGAAAAACTTCTGGATATTTGAGTTCCCCAAATATCGT
AGAATCTTTTAGTGCACATGGCAAAAGAAAGAGAGATGATTAAAACCTTT
AAATCCNTTTTCCATTTAAAATAGAAAAACTTCTGGATATTTGAGTTCCC
CAAATATCGTAGAATCTTTTAGTGCACATGGCAAAAGAAAGAGAGATGAT
TAAAACCTTTAAATCCAGTTAAATCAACTGAATTCTTTCCATAGTCCATA
AAAATTGAGAAAGGTGCATGTCTTGCTATTTTGTTTTTTGTATAAATTTG
AAGTTGGAACTTCTTATCACATGACAAAAAAATTTCCAACATCCAATGAA
ACTGAATGAAAATGCGCGATTTGTATCACGTAGCAGAAAAAAGTCCACAT
GATAGCAAATTTCCTGTAGAATGGCCGTTCCATTATATTTATAGGATAAG
AATACAAAGGGTTTTCAGGGTGTTCTACTATAAGCTGGGGCTTTGAGAGG
CTAAGTTTTTAGGGCAATTTTTATGGTTTTTCTGAAGCACATATTATAGC
TAGAAAGACCTAAGCTAGACTTAAAAAGATGTTGGTTAACCCAGGGGGTC
AGTACTAAGATCTCAGACATTGTATGAGTACTAAAAGGGTTTTTGAGAAT
ATTTTGCATACCACCACCCCATTTTAGAGAAGTGCTTTCTAAGTACCCAT
CTACTAATATTTTTGGGGACATTTTGGCACAGACCACCAAATGTTGGTCT
TCTCAGGACCACTTTTCTTAAAAGTGCTTTTAAAATTTTTATTTTAAAAA
TTTGTGCTTTCTAACAATGCTGCTCTAGCAATTATTAAAGACATTTGACT
GAATGTAAAGAATTTTCTGATGACATAAATGCTATTGTTTTCTTTAGCCT
GTTGGATTTTTGAACGAATGTACGAATGGCAAAAACAAAATTGATATCAA
ATTCAACCATGGAACCACAACGCTAGCCTTTAAATTTCAACATGGTGTCA
TTGTAGCTGTTGATTCTCGTGCGTCTGCTGGTTCCTATATCGGTATGTTA
CATTGAATTTCAACTACAGTCTTGACCCAGATTTAAGGTTTTTCGCCTTA
TTTTTCTATGGAAACACTCACAACCCTGGTATTTAACCGTAGCAAAAAAC
TACAGAGGCAAAAACATCAGACTTGCCTGGGCTGCTGACCTAGTTGGAAA
ACCTTTTTAGGTTTTTTTCCTTTGACACTGTAGAAATTTGGTCTGGATTG
GTATAGGATTTCTCTCAAAATATGAAATCCCATTTTCATTAATTTCGAAA
ATAGATAACCAATGATAATTTTGACCTTCATGAAAAATTAAATAATCAAA
ACAAATAAAATCTCATTTTTGTTTTCAGCATCTGGAACCGTGAAGAAAGT
TATCGAAATCAACCCATATCTTCTTGGTACAATGGCTGGCGGTGCTGCTG
ATTGTTCTTTTTGGGAGCGTCTCTTAGCTAAAGAATGCAGGTAAAAATTA
TATGAATGTTCCAACTATTAATGTTAGTTTAAGTAGTAAAATCTAAATAA
GTTATGGTCACGAAATTATATTGATATGGTGGCATAGACTTGAGTCGTTT
ATAATGCGTGTAATACTAATAATACCAATACTAATAATAATAATAATAAT
AATAATACGGGATTTAGTTTGTATAAACGACTGGAAGAATCCGGTGTTCC
AGCCTTATAGATACAGGGGCTAGCTACTNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCAAG
AATTATTTTGAGCAGGAAAAATTTATAATTGCAATATTGACACTTTTCTT
TTGTTTGGAGTTAGTGCACAAAGGTTTCTAGACGACTAAAATTGTTACAT
TCATTACATTTTGCTTTATTTCTACTATGTATAAATTAGTCGTCTAGCTT
GCTAGACTAATGGTGGCATTAAATTAACTTACGCTTACGGTTGCTTTATT
CTTTGTTAAAAAAAACAATAAGACACTCAACAGAATTATGTTAGGCATGA
CGGTCAACGGAAGTTGTTTTGGTAAAAAATAATAAAAATAGGAGATGAAA
TTATACTGGGTAAAAGCATATCAGTTCGGGAAATTGCTATAGATTCACAA
CGTTGCAAAATTCCGCAATGTTGCGTTTTTTCGCAACGCTTCCCTCAGCG
TGGGCTGCAATTTTTCGCAACGTTTCCAATGGAAGTGTGCGACTATGAAC
ACCAACTATGACGACCAATTTTCGCAAATAGAAGCAAAATTAGACAAAAT
CTGGCATATTTGAACAAAGTAGCATTTCTTCCAAGAATGATTGTGAATAA
TCGCTAGGTAGGAAATTAAAATGTTAGAGTGAAAAGTTTCCTCTTAGGTT
GTTCTTCAAAATGCACATTATTTTGGCCAGGTCTGCGAAATTATGCACTA
ATAAAGCTGCATGACAACGCAACGTTGCGGGTCTATGCAATTTCCTGAAT
TGATATCTGCCATTGAGCTGTCATGGGTCCATGTGGAACCGGATGACTCA
AATGCTACTCCACATGGACCCGTAGCTCAATGGTAGATATAATTGTAAAA
CAAAGGGCATAATTGTATAAATGATTAATATCTTTGAAAAAGAAAGCTAA
CAAAAAGTTAAAACAATTGACTTCAAGGCCAGGATTTTTATACGGGCAAT
GGCATAAAAATCAAGGGGTGTTCTCTCAGGTTCGCTTTATGAATTGGAGA
ATATTTTTTCATACGTCAGTATTTCATTTATTGCATTACCTAGCCCAACA
CTATGCTTGATTTACGCTGATCACATCACTGCACTCTCTCTTTTCTTTCA
GATTATATCAATTAAGAAATAAGGAACGTATATCTGTGGCGGCAGCATCC
AAAATTTTAGCAAATATGGTCTACCAATACAAAGGAATGGGTCTTAGTAT
GGTAAGAATATTCTGATATTCACCTATGGCTCATACTAACTGCCTGAAGA
ACTGAGCCCAATACTTATTCACTATCTTATAGTCTGTTACTATTGTATTA
AAATAAAGCATTTAAATCAATAAGGAACATTTAAGGAACAAATACAGCCA
ATCCCCGTGCAAAGCAATGTTCAACCTCGTACCCTGTGTTATATCGGCTT
TTTTTTATGCCTGATATCGCCAGATTTGATATTGTCTTGTGTCCATTAAG
TAAAGTAAATAAAGTCTATAACAATACATAGGGATGAAGTTAGGCAATAC
TAATAAAGCATTTTATGTTTTCTTTGCTTCTTAAAAGAATAACTAAATCA
GATTTGGTCATTTCAGACACGATATCAAATTTCTTCTTTAAACTTCTATT
TTTTCTTTCCTTTTACAGGGTACCATGATTTGTGGTTGGGATAAAAAGGT
AAATTTTATTTATTNAATAACTAAATCACATTTGGTCATTTCAGACACGA
TATCAAATTTCTTCTTTAAACTTCTATTTTTTCTTTCCTTTTACAGGGTA
CCATGATTTGTGGTTGGGATAAAAAGGTAAATTTTATTTATTTCGGGTTG
ATTTCGGTTCACAAACAACCGGCCAATACGACTTAAATTCATAAGTGTTT
TGCCTCGCTTCATAGCGTCAGCCCTGCTAGTTGGGGTCCACTCAAGCTAG
TTGGGGTCCCCTCAACTTCTTCACGAATCATTTTTATTTTTCTTAATCGT
AGGGACCTGGTCTATATTATGTTGATGACGAAGGAAGCAGATACAAGAAC
GATTTATTTTCTGTCGGCTCTGGCTCCACATACGCGTACGGTGTTTTAGA
CGCCAACCACCGATACGATTTATCCGTTGAAGAGGCTTATGACTTGGGAC
AACGAGCTATCTACCATGCTACACATCGAGACGCTGCGTCCGGTGGTGTG
GTCAATTGTAAGCCATCTTCTGCTTTCCTTCAATAAATGCCTTTTTTTTA
ACTCGAGGCTCAATTTTAGCCAATCGAACGGTTTAAACCTCATTTTTGGC
TAACCAATTGCTGAGTTTAGACCCCTTTTAAGCCAACAAGTGAATAAAGT
AAGCATATCCAGAAAAAACATTACAATAAACCCGAGACTCGTTAGAAAAA
ATATAACAAAGAAAATTAAGTACAAGCAAGCCGCACTGAGCCGCAACCAA
ATTTACCAGTTCTTGTAGCGGGTATATCTTTTAAAGATCTTACGTTTTTT
TGGACACAATTTTTTTTTTCTTCGAAAAATGCACTATGCTCTTCCTCCAA
AGACTCGCAATGCTTTTCCTTAAAAAATACACATGATGAACCCCCCCCCC
AAAAAAAAAAAATGGTGCTGATTGTCACTACAGGGGCAATTTTCCTCCAG
AACCAATTTCTTTTTCAAAAATTTCGATTTTTTACCATAGTATACCACAT
GCAAGAAACTGGATGGATTAAAGTTTCACAAACAGACGTTACTGAGCTAC
ATTATCGATATAAAGAGGAAGCTTAAAGATTTCATCTCCTACCAACCCAC
TAAAACCACTGTTCATCAAAATCTCTTCTCACCAATTGTTGAGGTGAGTG
AGAGATTCTTTAACCATCTGAGAATTTCGGGATCCGAATTTTCTCAATTC
AAACCAGTTCAAACACCGACACCTTTGAAAGACGTTGTATCTTTTTTTTT
TCTAAATAATTTTCAGAAATATTTAAACTGTAAACTTATAAAGATTTTAA
GCTGTTGATTTTTTTTTTCGTTTCACTTGAAAAGGAGTTATTTTTCGGAT
ACTTTATACCATAAATACTATGCCTTTCATCTTGTTTGTTACTATTTGGG
TAGAGTTAAGTATTATTGTCATTTATGAGAAATGAGTTATACCCCGTTGA
TAACTGTTGCGCTGTGATTCCTACTCCACCGTGGGTAGGACCCATTTCGA
TGCATCGGAGGGCATATTTATCTATATCGAAAATATTTCTTTGCTATCAT
ATACTCAAACTGCACCATACTCAAACTGCACCATACTATTGGAATCGAAA
AAAAAACATACCCAAGGAAAGAATAAATGGTATAGAATTTGATGGTCATT
GATTATCTATATTTACCTAAAGTAAAAGAAAATCATTTTACAACTATTTC
TACGGTGCGAAAATATCATCTCCTCGCAAGGGCGGCGTCATTGGGTCGTG
TTCCCTTACTTTTCTGTACCCTTCTTTTTCCTTCCGTCGTCTTTGTCCGT
CATCCTTCGTTTGCCCACCCCTTCCAGGGGGTAGAGCGGGTGTTTCTTCG
CCTCCTCTCCCTGGTAAAGGTGGTGCTCGGTGACCTTGCTTCCCTCTTGC
GGGTATTGAGGGTTCTTTGATCTCCGAAGTTTCTCTTCCGGGAATTCCTG
GTGGCGATCGGTGGCTGTGCTTTCCTCTTCCGTGTATTGACGGTTGCTCT
TGGATCGCGGACGTCTCTCTTCCGGGAATTCCTGGCGGTGCTCGGTTGCC
TTGTTTTCCTCTCCCCGGTTTTGACGGTTGCTCGTTGATCACCGAAGTCT
CTCTTCCGGGAATCCCTGGCGGTGCTCGGCTGCCGTGCTTTCCTCTTCCG
GGTATTGAAGGTTGCTCTTGGATTTCCGAAATCTCTCTTCCAGGAATTCC
TGGTGGGGCTCGGGAACCCTTCTTTTCCCTTCCATCTACCTCTGGCGAGT
CTTCAAAGTCCGAAGTCTCCTTTTTCATCTTATGTCGTGACTTTTTTCTA
TTTTTCTCTTCGTGTGAGCTATCCTTCTTCGATTTCTGGTTGGAGTCATC
TTCCTCATTCGTTTCTTGGCTGTCTTCTTTACGTCGTCTTTTGGAACGTC
CACCGTTCTTTTTAGTATTGTTATTGCTTTCATCGTCTTTTCTCGTTCCT
CTAACACCTTTTTCTATTTCGTCTTCCTCTTGATCACCACTCAGTTTCCT
GAAATGTCAAAATGATTTATATTCAAGACCAACTACCTTGGAACCAGATG
TAGACAATAATGCTATATGTTATCTTGCGTTAAGGGGACGCCTCAATAGT
CTGTCTGTCTGTTTCAATAATAATAATCGGGGACAAAGTTTTTTTATCTT
TGCAGCAGATCGGTCAAATTAGGATTTGATTAGGAAAAAATGAAGTGCAA
AGTTTACATCCGGAAAAGACAGCAGTGGTAGATTTTGATGTGAAGAACTC
CTTTATCTACTGCAATCCCCTAATTTATCCACTCATATTCACTGTTTTTT
AAAAATGTTCGACAGTGTAGAAACTTGGAATTCGAGGCTCCTTTCGGCTT
GAATGGATCTGGGAGGGATCACCTCGAAATATTCCCAATTATGATTACTC
ACTTTTCGAAAACAAATTTCCATAGAGCAAAGATGACGGCACATGAAATA
CCGATTGAACATATTGCGCCGATTGCTTTTGCGGAACCAGATTCAAGAGG
ATCCTTTGGTTTAGGTGTTGTCGGTGTTGTTGTTGTTGTCGGTGTTGTCG
GTGTTGTCGTTGTCGTTGTTGTCGTAGTGGTAGTGGTGGTCGTTGTTGTG
GTTGTGGTTGTTGTTGGAGCTAAATAGGAAATAAGATTAATATAGCCGAA
GACTAGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039650XLOC_039650Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063267-exon-scaffold_385-1575043694:36786..37071TCONS_00063267-exon-scaffold_385-1575043694:36786..37071Clytia hemisphaericaexon
TCONS_00063267-exon-scaffold_385-1575043694:29180..29324TCONS_00063267-exon-scaffold_385-1575043694:29180..29324Clytia hemisphaericaexon
TCONS_00063267-exon-scaffold_385-1575043694:28732..28843TCONS_00063267-exon-scaffold_385-1575043694:28732..28843Clytia hemisphaericaexon
TCONS_00063267-exon-scaffold_385-1575043694:27121..27220TCONS_00063267-exon-scaffold_385-1575043694:27121..27220Clytia hemisphaericaexon
TCONS_00063267-exon-scaffold_385-1575043694:26674..26703TCONS_00063267-exon-scaffold_385-1575043694:26674..26703Clytia hemisphaericaexon
TCONS_00063267-exon-scaffold_385-1575043694:26165..26369TCONS_00063267-exon-scaffold_385-1575043694:26165..26369Clytia hemisphaericaexon
TCONS_00063267-exon-scaffold_385-1575043694:25217..25681TCONS_00063267-exon-scaffold_385-1575043694:25217..25681Clytia hemisphaericaexon
TCONS_00063267-exon-scaffold_385-1575043694:23514..25183TCONS_00063267-exon-scaffold_385-1575043694:23514..25183Clytia hemisphaericaexon
TCONS_00063267-exon-scaffold_385-1510915933:36786..37071TCONS_00063267-exon-scaffold_385-1510915933:36786..37071Clytia hemisphaericaexon
TCONS_00063267-exon-scaffold_385-1510915933:29180..29324TCONS_00063267-exon-scaffold_385-1510915933:29180..29324Clytia hemisphaericaexon
TCONS_00063267-exon-scaffold_385-1510915933:28732..28843TCONS_00063267-exon-scaffold_385-1510915933:28732..28843Clytia hemisphaericaexon
TCONS_00063267-exon-scaffold_385-1510915933:27121..27220TCONS_00063267-exon-scaffold_385-1510915933:27121..27220Clytia hemisphaericaexon
TCONS_00063267-exon-scaffold_385-1510915933:26674..26703TCONS_00063267-exon-scaffold_385-1510915933:26674..26703Clytia hemisphaericaexon
TCONS_00063267-exon-scaffold_385-1510915933:26165..26369TCONS_00063267-exon-scaffold_385-1510915933:26165..26369Clytia hemisphaericaexon
TCONS_00063267-exon-scaffold_385-1510915933:25217..25681TCONS_00063267-exon-scaffold_385-1510915933:25217..25681Clytia hemisphaericaexon
TCONS_00063267-exon-scaffold_385-1510915933:23514..25183TCONS_00063267-exon-scaffold_385-1510915933:23514..25183Clytia hemisphaericaexon
TCONS_00063267-exon-scaffold_385-1491911889:36786..37071TCONS_00063267-exon-scaffold_385-1491911889:36786..37071Clytia hemisphaericaexon
TCONS_00063267-exon-scaffold_385-1491911889:29180..29324TCONS_00063267-exon-scaffold_385-1491911889:29180..29324Clytia hemisphaericaexon
TCONS_00063267-exon-scaffold_385-1491911889:28732..28843TCONS_00063267-exon-scaffold_385-1491911889:28732..28843Clytia hemisphaericaexon
TCONS_00063267-exon-scaffold_385-1491911889:27121..27220TCONS_00063267-exon-scaffold_385-1491911889:27121..27220Clytia hemisphaericaexon
TCONS_00063267-exon-scaffold_385-1491911889:26674..26703TCONS_00063267-exon-scaffold_385-1491911889:26674..26703Clytia hemisphaericaexon
TCONS_00063267-exon-scaffold_385-1491911889:26165..26369TCONS_00063267-exon-scaffold_385-1491911889:26165..26369Clytia hemisphaericaexon
TCONS_00063267-exon-scaffold_385-1491911889:25217..25681TCONS_00063267-exon-scaffold_385-1491911889:25217..25681Clytia hemisphaericaexon
TCONS_00063267-exon-scaffold_385-1491911889:23514..25183TCONS_00063267-exon-scaffold_385-1491911889:23514..25183Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_385supercontigscaffold_385:23514..37071 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
164.663	172.773	155.989	160.448	122.908	98.8935	138.304	144.648	129.467	128.975	125.96	123.211	105.408	106.593	120.781	129.938	131.1	135.482	68.2221	74.1934	101.461	103.233	107.772	103.067	137.427	142.805	115.534	112.17	74.4016	69.3777
Blast
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BLAST of TCONS_00063267 vs. Swiss-Prot (Human)
Match: PSB5 (Proteasome subunit beta type-5 OS=Homo sapiens GN=PSMB5 PE=1 SV=3)

HSP 1 Score: 340.117 bits (871), Expect = 4.017e-108
Identity = 159/205 (77.56%), Postives = 181/205 (88.29%), Query Frame = 2 
Query:  335 IKFNHGTTTLAFKFQHGVIVAVDSRASAGSYIASGTVKKVIEINPYLLGTMAGGAADCSFWERLLAKECRLYQLRNKERISVAAASKILANMVYQYKGMGLSMGTMICGWDKKGPGLYYVDDEGSRYKNDLFSVGSGSTYAYGVLDANHRYDLSVEEAYDLGQRAIYHATHRDAASGGVVNLYHMQETGWIKVSQTDVTELHYRY 949
            I+  HGTTTLAFKF+HGVIVA DSRA+AG+YIAS TVKKVIEINPYLLGTMAGGAADCSFWERLLA++CR+Y+LRNKERISVAAASK+LANMVYQYKGMGLSMGTMICGWDK+GPGLYYVD EG+R     FSVGSGS YAYGV+D  + YDL VE+AYDL +RAIY AT+RDA SGG VNLYH++E GWI+VS  +V +LH +Y
Sbjct:   54 IEMLHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLHEKY 258
The following BLAST results are available for this feature:
BLAST of TCONS_00063267 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PSB54.017e-10877.56Proteasome subunit beta type-5 OS=Homo sapiens GN=... [more]
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