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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00063463 ID=TCONS_00063463|Name=TCONS_00063463|organism=Clytia hemisphaerica|type=transcript|length=1054bp
CTGATGAGAAGGATGGTAGTATTACTATTACAACTTTTTGCATAGATTAC
CATTTCTCGAAGCGGAATCGGATTGCAAAGACTTGTTATCAGTTGTCTGG
TGTGTTTTAATTTAATTCGTTTTCAAGTAGTGATTGCAGTCATAATCATG
GGGTCCACTGTTAATCAACAACAATGCGTTACATTGAACAtcattaaagg
caaaaatacTTTTTGTTATACGGAAATATGGGAACCTTTCTCGTACGGTG
GCACGTTGGGTCTTACCATTCCATTATGTGCCATTGCTTTCTTGGTAGTC
GCCTTTGGATTTTTTTGCACTGGAATCTTAAATGAACTTTCAAATTTGCG
AGATGAATATCTCACACATTTTGACAAAGAGGGAGCGAGTTGTTTTGAGA
AATTATGTGCAAAACTTAGTAAAAAATCCAAATCTTTCTTCCTGATTTTC
GGTGAACTCCAAGGTTGGAAGTATATCTACGCTGTTATTGATATTTTGTT
GGATTTAATAGTTTTTTACAAACTGCAACAAGGATATTACTTTAATAAAG
CAATATATCGAAATGACACAgtaatttggtttttatttgcTTTCGCATTA
TTGGGGTTCGTTTCAAAAATGGAAGGATTTAGTTgtattttaaaaaagaa
attgccacCGCAAAACAAGGGATTAACTGACTGGAGAGTATTTTTTGTGC
TCTCGCAATTCCTCTTTGACGACGGTCCCGAATTAATTTTGCAGTTTTTC
TATATTGAAAATTACGAAGTTCGCTACACGGCCCAATGGATTCTGGCTAA
AGATATTGCCTACATGATAGTGGCTGTTTTGAAATCCGTCTACCATTTCA
CGAAGGCCGTCAAAGCGGTGAAAAAATGTTGTCAAAGCCCAAGAGGGTTT
CTCGATTTTCTCTTGTATATTTCGGTTTGGCTTTTCACGATAGTGTCGGT
TTTAAGAGTCGTGGCGCATTTTGTTCAACATCAAACCAACGAATTGACGC
AATGGTGCTACCAAGAAAAAGAAGGCCGAATCTATCAAACGCCATTTGAC
TTTG Run BLAST on NCBI transcript from alignment at scaffold_39:367843..368896+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00063463 ID=TCONS_00063463|Name=TCONS_00063463|organism=Clytia hemisphaerica|type=transcript|length=1054bp|location=Sequence derived from alignment at scaffold_39:367843..368896+ (Clytia hemisphaerica)
CTGATGAGAAGGATGGTAGTATTACTATTACAACTTTTTGCATAGATTAC
CATTTCTCGAAGCGGAATCGGATTGCAAAGACTTGTTATCAGTTGTCTGG
TGTGTTTTAATTTAATTCGTTTTCAAGTAGTGATTGCAGTCATAATCATG
GGGTCCACTGTTAATCAACAACAATGCGTTACATTGAACAtcattaaagg
caaaaatacTTTTTGTTATACGGAAATATGGGAACCTTTCTCGTACGGTG
GCACGTTGGGTCTTACCATTCCATTATGTGCCATTGCTTTCTTGGTAGTC
GCCTTTGGATTTTTTTGCACTGGAATCTTAAATGAACTTTCAAATTTGCG
AGATGAATATCTCACACATTTTGACAAAGAGGGAGCGAGTTGTTTTGAGA
AATTATGTGCAAAACTTAGTAAAAAATCCAAATCTTTCTTCCTGATTTTC
GGTGAACTCCAAGGTTGGAAGTATATCTACGCTGTTATTGATATTTTGTT
GGATTTAATAGTTTTTTACAAACTGCAACAAGGATATTACTTTAATAAAG
CAATATATCGAAATGACACAgtaatttggtttttatttgcTTTCGCATTA
TTGGGGTTCGTTTCAAAAATGGAAGGATTTAGTTgtattttaaaaaagaa
attgccacCGCAAAACAAGGGATTAACTGACTGGAGAGTATTTTTTGTGC
TCTCGCAATTCCTCTTTGACGACGGTCCCGAATTAATTTTGCAGTTTTTC
TATATTGAAAATTACGAAGTTCGCTACACGGCCCAATGGATTCTGGCTAA
AGATATTGCCTACATGATAGTGGCTGTTTTGAAATCCGTCTACCATTTCA
CGAAGGCCGTCAAAGCGGTGAAAAAATGTTGTCAAAGCCCAAGAGGGTTT
CTCGATTTTCTCTTGTATATTTCGGTTTGGCTTTTCACGATAGTGTCGGT
TTTAAGAGTCGTGGCGCATTTTGTTCAACATCAAACCAACGAATTGACGC
AATGGTGCTACCAAGAAAAAGAAGGCCGAATCTATCAAACGCCATTTGAC
TTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00063463-exon-scaffold_39-1491911889:367843..368896 | TCONS_00063463-exon-scaffold_39-1491911889:367843..368896 | Clytia hemisphaerica | exon |
| TCONS_00063463-exon-scaffold_39-1510915933:367843..368896 | TCONS_00063463-exon-scaffold_39-1510915933:367843..368896 | Clytia hemisphaerica | exon |
| TCONS_00063463-exon-scaffold_39-1575043694:367843..368896 | TCONS_00063463-exon-scaffold_39-1575043694:367843..368896 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_39 | supercontig | scaffold_39:367843..368896 + |
Blast
The following BLAST results are available for this feature:
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