TCONS_00063723 (transcript) - C. hemisphaerica

Overview
NameTCONS_00063723
Unique NameTCONS_00063723
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length287

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00063723 ID=TCONS_00063723|Name=TCONS_00063723|organism=Clytia hemisphaerica|type=transcript|length=287bp
GGTCAAGAAGGGTTCGTATATGACTGGATATTCATACGGTGCACAACGTA
ACCAGAACGCTGTTCGATGCCCGTATCAATTCTCAACAACTGGTGACCAA
AAACATATCAAAGAGAATTTCTTCGCTTTTGGAGGCCCTTTCAATCAAGA
GCCGCAAAATAATAACTGAAAATGCTTGGGTCAACACATCTCTTTAATTA
TGATCAAAATGTTTGCGGCTTTGTTCGCAAGATGTGAAATCGAAGTTGTT
TCCAGTTTGAAATTCACAGAATCCAACCCAACACGAG
Run BLAST on NCBI

transcript from alignment at scaffold_399:29633..29919

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00063723 ID=TCONS_00063723|Name=TCONS_00063723|organism=Clytia hemisphaerica|type=transcript|length=287bp|location=Sequence derived from alignment at scaffold_399:29633..29919 (Clytia hemisphaerica)
CTCGTGTTGGGTTGGATTCTGTGAATTTCAAACTGGAAACAACTTCGATT
TCACATCTTGCGAACAAAGCCGCAAACATTTTGATCATAATTAAAGAGAT
GTGTTGACCCAAGCATTTTCAGTTATTATTTTGCGGCTCTTGATTGAAAG
GGCCTCCAAAAGCGAAGAAATTCTCTTTGATATGTTTTTGGTCACCAGTT
GTTGAGAATTGATACGGGCATCGAACAGCGTTCTGGTTACGTTGTGCACC
GTATGAATATCCAGTCATATACGAACCCTTCTTGACC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039946XLOC_039946Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063723-exon-scaffold_399-1491911889:29633..29919TCONS_00063723-exon-scaffold_399-1491911889:29633..29919Clytia hemisphaericaexon
TCONS_00063723-exon-scaffold_399-1510915933:29633..29919TCONS_00063723-exon-scaffold_399-1510915933:29633..29919Clytia hemisphaericaexon
TCONS_00063723-exon-scaffold_399-1575043694:29633..29919TCONS_00063723-exon-scaffold_399-1575043694:29633..29919Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_399supercontigscaffold_399:29633..29919 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00063723 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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