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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00063743 ID=TCONS_00063743|Name=TCONS_00063743|organism=Clytia hemisphaerica|type=transcript|length=1262bp
AAAAAAGTAGAGCAGCAAGAGCGTgttataaaagaaagttttttatcatt
aatttttATGACCAGCTCTCACACCAACCAAACAGTGGATTCAGAAGAAT
ATTGGTATGATAATGAATGGGAGTATTATGAACAAGAGACAATATCAGGT
GACTTTTCTGTTAAACAGAAAACAGGAAAacgtcacaaaaacaaaaatcg
gGATGTAGCAGAAAAGCAAAAGCAGGCTATCAAAACTGAAGTCAAGAAAT
CAAATGATGATACAGTGCGAGATTTGACGAAAGAGTTTTCCAAACATCCT
GGATTCAGTGATGTAGGATCACATCAATTGAAAAAGGAAATCAATCGATC
TTTGATGGTTGAAAACCAAAATGTTAAATGTAAGAACAACATTGAGAAGA
AgttgttgaaaacaaaaacaaaacggTTATCCAATTCTGATGTTGATCAC
ACACCAGATTGGGAGTTTACACGAAAACCACACACACTATGGGAAGAAAT
GATTCATGCTGAGAAATTCCAACCGATTGATTTTTGTGAGGATGAACATT
ATTTTGTGACATTGGACCGTAAAGTTGAGTTACGATCCACGCCAGATTAT
GTACTCAAGAAATTGAATCACCAGCGCCGTAAGAAGAGCTGGCATCTAAA
AATAAGCCATGTAGATGAATGTTATCATGGAACATCAGATTTCGATCCTG
ATTATTGTTACTATCAATGCAGCTCAGCAAGAGGTTATCCAACGTGCTTC
ATTTGCTCATGTAAGCTTGGACCCTATGAACGACAATGGGTTAAACTGCA
ATGTGACCATGAATTTCATTATGAATGCATTTATAAATGGCTTACCTACT
CAGATCAATGCCCAGTCGATTTTACATATGTGgctcaaaaactttgaaag
atattgaaaaaaattttaatccaGCATACATGCCAAGAAACAATGTCATG
TTGAACAAAATTATGCATTTTACatgtaataaattttttatatacAAAAC
ATCATTCAAAATCAAAAGCTCTTTTGTTAATTGAGACATGAAAACATTTA
AAgtaatcaaatttcatttctagtTATGTTCGGTACaatatttaaatttt
ctgtgtAGTCCTTGAGTCTGAGTTTTTTGTCCCAATTTCTGAGTCACTTC
AGATTTTTCTGGCTAACTAATACATCCAGTGActtattattttgcagatt
tctCTGTTGACGAAGGTATTTTTTATTCTACAAAGATTTTTATTATATAT
ATTCgaataaac Run BLAST on NCBI protein sequence of TCONS_00063743-protein >TCONS_00063743-protein ID=TCONS_00063743-protein|Name=TCONS_00063743-protein|organism=Clytia hemisphaerica|type=polypeptide|length=298bp
KKVEQQERVIKESFLSLIFMTSSHTNQTVDSEEYWYDNEWEYYEQETISG
DFSVKQKTGKRHKNKNRDVAEKQKQAIKTEVKKSNDDTVRDLTKEFSKHP
GFSDVGSHQLKKEINRSLMVENQNVKCKNNIEKKLLKTKTKRLSNSDVDH
TPDWEFTRKPHTLWEEMIHAEKFQPIDFCEDEHYFVTLDRKVELRSTPDY
VLKKLNHQRRKKSWHLKISHVDECYHGTSDFDPDYCYYQCSSARGYPTCF
ICSCKLGPYERQWVKLQCDHEFHYECIYKWLTYSDQCPVDFTYVAQKL Run BLAST on NCBI transcript from alignment at scaffold_4:21272..22533 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00063743 ID=TCONS_00063743|Name=TCONS_00063743|organism=Clytia hemisphaerica|type=transcript|length=1262bp|location=Sequence derived from alignment at scaffold_4:21272..22533 (Clytia hemisphaerica)
gtttattcGAATATATATAATAAAAATCTTTGTAGAATAAAAAATACCTT
CGTCAACAGagaaatctgcaaaataataagTCACTGGATGTATTAGTTAG
CCAGAAAAATCTGAAGTGACTCAGAAATTGGGACAAAAAACTCAGACTCA
AGGACTacacagaaaatttaaatattGTACCGAACATAactagaaatgaa
atttgattacTTTAAATGTTTTCATGTCTCAATTAACAAAAGAGCTTTTG
ATTTTGAATGATGTTTTgtatataaaaaatttattacatGTAAAATGCAT
AATTTTGTTCAACATGACATTGTTTCTTGGCATGTATGCtggattaaaat
ttttttcaatatctttcaaagtttttgagcCACATATGTAAAATCGACTG
GGCATTGATCTGAGTAGGTAAGCCATTTATAAATGCATTCATAATGAAAT
TCATGGTCACATTGCAGTTTAACCCATTGTCGTTCATAGGGTCCAAGCTT
ACATGAGCAAATGAAGCACGTTGGATAACCTCTTGCTGAGCTGCATTGAT
AGTAACAATAATCAGGATCGAAATCTGATGTTCCATGATAACATTCATCT
ACATGGCTTATTTTTAGATGCCAGCTCTTCTTACGGCGCTGGTGATTCAA
TTTCTTGAGTACATAATCTGGCGTGGATCGTAACTCAACTTTACGGTCCA
ATGTCACAAAATAATGTTCATCCTCACAAAAATCAATCGGTTGGAATTTC
TCAGCATGAATCATTTCTTCCCATAGTGTGTGTGGTTTTCGTGTAAACTC
CCAATCTGGTGTGTGATCAACATCAGAATTGGATAAccgttttgtttttg
ttttcaacaacTTCTTCTCAATGTTGTTCTTACATTTAACATTTTGGTTT
TCAACCATCAAAGATCGATTGATTTCCTTTTTCAATTGATGTGATCCTAC
ATCACTGAATCCAGGATGTTTGGAAAACTCTTTCGTCAAATCTCGCACTG
TATCATCATTTGATTTCTTGACTTCAGTTTTGATAGCCTGCTTTTGCTTT
TCTGCTACATCccgatttttgtttttgtgacgtTTTCCTGTTTTCTGTTT
AACAGAAAAGTCACCTGATATTGTCTCTTGTTCATAATACTCCCATTCAT
TATCATACCAATATTCTTCTGAATCCACTGTTTGGTTGGTGTGAGAGCTG
GTCATaaaaattaatgataaaaaactttcttttataacACGCTCTTGCTG
CTCTACTTTTTT Coding sequence (CDS) from alignment at scaffold_4:21272..22533 >TCONS_00063743 ID=TCONS_00063743|Name=TCONS_00063743|organism=Clytia hemisphaerica|type=CDS|length=897bp|location=Sequence derived from alignment at scaffold_4:21272..22533 (Clytia hemisphaerica)
tcaaagtttttgagcCACATATGTAAAATCGACTGGGCATTGATCTGAGT
AGGTAAGCCATTTATAAATGCATTCATAATGAAATTCATGGTCACATTGC
AGTTTAACCCATTGTCGTTCATAGGGTCCAAGCTTACATGAGCAAATGAA
GCACGTTGGATAACCTCTTGCTGAGCTGCATTGATAGTAACAATAATCAG
GATCGAAATCTGATGTTCCATGATAACATTCATCTACATGGCTTATTTTT
AGATGCCAGCTCTTCTTACGGCGCTGGTGATTCAATTTCTTGAGTACATA
ATCTGGCGTGGATCGTAACTCAACTTTACGGTCCAATGTCACAAAATAAT
GTTCATCCTCACAAAAATCAATCGGTTGGAATTTCTCAGCATGAATCATT
TCTTCCCATAGTGTGTGTGGTTTTCGTGTAAACTCCCAATCTGGTGTGTG
ATCAACATCAGAATTGGATAAccgttttgtttttgttttcaacaacTTCT
TCTCAATGTTGTTCTTACATTTAACATTTTGGTTTTCAACCATCAAAGAT
CGATTGATTTCCTTTTTCAATTGATGTGATCCTACATCACTGAATCCAGG
ATGTTTGGAAAACTCTTTCGTCAAATCTCGCACTGTATCATCATTTGATT
TCTTGACTTCAGTTTTGATAGCCTGCTTTTGCTTTTCTGCTACATCccga
tttttgtttttgtgacgtTTTCCTGTTTTCTGTTTAACAGAAAAGTCACC
TGATATTGTCTCTTGTTCATAATACTCCCATTCATTATCATACCAATATT
CTTCTGAATCCACTGTTTGGTTGGTGTGAGAGCTGGTCATaaaaattaat
gataaaaaactttcttttataacACGCTCTTGCTGCTCTACTTTTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00063743-exon-scaffold_4-1491911889:21272..22533 | TCONS_00063743-exon-scaffold_4-1491911889:21272..22533 | Clytia hemisphaerica | exon |
| TCONS_00063743-exon-scaffold_4-1510915933:21272..22533 | TCONS_00063743-exon-scaffold_4-1510915933:21272..22533 | Clytia hemisphaerica | exon |
| TCONS_00063743-exon-scaffold_4-1575043694:21272..22533 | TCONS_00063743-exon-scaffold_4-1575043694:21272..22533 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_4 | supercontig | scaffold_4:21272..22533 . |
Annotated Terms
The following terms have been associated with this transcript:
Blast
The following BLAST results are available for this feature:
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