TCONS_00063750 (transcript) - C. hemisphaerica

Overview
NameTCONS_00063750
Unique NameTCONS_00063750
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1851

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00063750 ID=TCONS_00063750|Name=TCONS_00063750|organism=Clytia hemisphaerica|type=transcript|length=1851bp
aaaaaatcttattgttaaaatttttgcaagcaaattcaatttttttaaac
cttttgtGTATGAGTCATTTGTACAAATTGAGTCATTTGGTCTCTTACTC
GAACAATTGAGGTATTCATTAAAacaatttgattggttctcCCTTTAGTC
ACGTGAGTTTTGTTCCTATTGTTCTGTTTGGAAGGCTTGGGACCATATAT
ACAGGTAGCACTCCCTATCTAATTATTTCAACAGCCAACTTTCAACTTGA
GAGGTAGTCTTCTTAAAAAGCAATAGCAATAGAAGAATTACTGCTCCTGT
GCATTATGGTTTCTCTACGAGTGCTCATCGCGTTCAGCGCTCTGATTGCT
TTAGCATCTTCTCAAACCTTTGGTGACGGAACCGTTGGTGCAAGTTTCGA
AGTTAAGTGTGACGACACACACTTTGCTGTCTGGTTTAACAAAACCGCTT
TGGATGAAAGACAAGATGGTACCAACAACAACCGAACATGGCAAATCTAT
TTCGAAGGTCAACGAGATGATGCCACCTGTACAACATACCATTGGGATAC
CAGTAAAAACAATGTCAGCTATAATAGCCTTTCAAACCCTACAGGGCTTC
CATTTAATGTCCAAATCGGTGCACCAGTCAAAAACTGTGGAATCAACGTT
TTTGCTGATGCAACACACATTATCTACAACACAACACTTATTGTTACATA
CGGTCAAAATCCAACTGCTGAAATCGGACGTGAAGAGTATGACAAATACA
ATGTCATGTGCTTGAGAAATCGAACGGTTAACGAAATGGTCGATTTTGAT
GTTGAATTTCGTCAAACTGGAAATGACGCTAAGAATACTACCGAGGATTA
CAGTTTCACTTTCACCCACACTGATATGGCTGATGCAACTACATTAGTCT
ACAATCTTGGAGACTacatcaaattcaaaatggtcTCAAACACAGCGCAA
ACTGAAGTAAAAGCTGTGATCCAAAGATGTTGGACTACCACTGACGGATC
AGCCAACTCGTACACTTTGATCAGCGACAGatGTACCATGGAAACTGGAA
CTAGCTGGGTTAGTAATCCAAGTGACGCTGAGTCTGTCTTCAAAACCGAA
GCTTTCAGATACTTGGCTGCCTCTGAAAACAAAATCTATGCTCAATGCCT
TGTCCGTGTTTGTCTGGATACTCAAACTAGCGCTGAATGTACACTTTGCA
CTCCTGGTATCACCCGTAAGAGACGTAGTaccgaagaagaagaagaaccc
AGTGTTGGACAAATGGCTTTAATAAAATCATCAGTCTTCTACATCATTGA
AAGAGACACTCCAGCCCAAGGATCACAAGAATCAGAAAACTTTATGAGTG
GAACCAAAGGAGTTGTTGTCATCATTCTCTTGGCAACTTTGGTGTTTGTT
ATTGCTGCTGCCATTGTCAAGAAAGTTTTCTTCAGTGCTCCAGCTGTTGT
TGCATCACCAGTTGTTGCCTACAGTAATAAAGCTATGGCTTAAATATTAA
ACACGTTATACAAGAACACAAAAAGTTGACGCAACAAagtcaaaacattt
aaaataattcaagctcttgaaaactttttttttTGGGTCTACTGTCAAAA
TTTATTATTGTCCATTTATTGTATCTTCTATTATATACTAAAAGCAGAAG
AAATATATTTTATATGCTATTATATTTGAAAGTTTTAAGTATATTGTCTT
CGAAAATTATTTTTGTTGTTGTTGTTGTTTTTTTGTTTTTTTTGCGAATG
ATAGTATAAAAACCTTTTATCGTTTAGAAgtattttgtaatatttttgtt
tcaaacaGTTATCTTTTTGTCAAGAAATGTTATTACTTGGTATGTAAAAA
A
Run BLAST on NCBI

protein sequence of TCONS_00063750-protein

>TCONS_00063750-protein ID=TCONS_00063750-protein|Name=TCONS_00063750-protein|organism=Clytia hemisphaerica|type=polypeptide|length=395bp
MVSLRVLIAFSALIALASSQTFGDGTVGASFEVKCDDTHFAVWFNKTALD
ERQDGTNNNRTWQIYFEGQRDDATCTTYHWDTSKNNVSYNSLSNPTGLPF
NVQIGAPVKNCGINVFADATHIIYNTTLIVTYGQNPTAEIGREEYDKYNV
MCLRNRTVNEMVDFDVEFRQTGNDAKNTTEDYSFTFTHTDMADATTLVYN
LGDYIKFKMVSNTAQTEVKAVIQRCWTTTDGSANSYTLISDRCTMETGTS
WVSNPSDAESVFKTEAFRYLAASENKIYAQCLVRVCLDTQTSAECTLCTP
GITRKRRSTEEEEEPSVGQMALIKSSVFYIIERDTPAQGSQESENFMSGT
KGVVVIILLATLVFVIAAAIVKKVFFSAPAVVASPVVAYSNKAMA
Run BLAST on NCBI

transcript from alignment at scaffold_40:2957..11179+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00063750 ID=TCONS_00063750|Name=TCONS_00063750|organism=Clytia hemisphaerica|type=transcript|length=8223bp|location=Sequence derived from alignment at scaffold_40:2957..11179+ (Clytia hemisphaerica)
aaaaaatcttattgttaaaatttttgcaagcaaattcaatttttttaaac cttttgtGTATGAGTCATTTGTACAAATTGAGTCATTTGGTCTCTTACTC GAACAATTGAGGTATTCATTAAAacaatttgattggttctcCCTTTAGTC ACGTGAGTTTTGTTCCTATTGTTCTGTTTGGAAGGCTTGGGACCATATAT ACAGGTAGCACTCCCTATCTAATTATTTCAACAGCCAACTTTCAACTTGA GAGGTAGTCTTCTTAAAAAGCAATAGCAATAGAAGAATTACTGGTGAgta ttatctttttttattttgaacttgGGTTGGTTATTGACAGTCATCGTGAC CcatgaagtataagcccaaagggctagatagaATAaattcttcaaccttt ctcaagcaagaaaaagtgaagccttaaaatatgcgccgtatttttgacga cagattgaatctagcgattcctttgttttcgagtggtatcttttttgaaa tttaagtgTAAGTTTtatagtttcaatctgtcatttgtgtaaaaaccagg cgaactgcgctaggccgcgcaactttggtaggatttttggtaagcttcaa atcctaccaaggagatttgattttagcccttcgggcttatacttcattga ttgTGACGTACTCTGGCGCTCAAGAGGTTCAGCTTCGAGTGAGCATTGTT TTCTAAGTGTCGTTCAGGTGTCATGGTATACAGCTCACGTCTGTCAAGTC GtagtgtctgtcagcgccgtgattctTACTTCTCCGGGATGACTAGAACC TACCCCGAATGCAGTCGGAGGGATCTCATTTATCTATCTATTTGGGTTGA ACTGtataaaaaagtaaagaaagtcacaatcttttgatttatttttaaaa tatttgagtGATAGAGAGAACGTAGCTACACGtttctctttttataagaa caaactatataagaacataaggctttaatGACaagaattttaagaacaag ttaagaacatttttaggctttgtagactctaaaacacctgatgTCTTAGG AAGACGAAATAAAATACTACGAAAATAggtaaaataagaacatgttaaga acatcccaagtcttcttttcttataagaaaaacatttatttttctttgga gAAACTTTCCAACAGCATCATTGGTGGTTTTGAGTGAGCAAGActaaaaa tcaattatttagAGGCTTTCTTATGATAATTTAGTGTGAATAGTTTTGGA ATGTAATTTTCATTGCGTTTCAAGTAGGGatgaaaacaaaatcaattttc tagTGGGGGGAGGCCCGAAatggtcaaatttttcattggATAGGGATAAA TCACTTGGCCTGTGACAACAAAGCGGTTTTACTTTCTTTAAGAGTATTTA TATTACATTTTTCCCCATTTAATTTTAGCTCCTGTGCATTATGGTTTCTC TACGAGTGCTCATCGCGTTCAGCGCTCTGATTGCTTTAGCATCTTCTCAA ACCTTTGGTGACGGAACCGTTGGTGCAAGTAAGACCATCCTTTCAACATT TTTCTAACATTcaaaacgtccatataacgttagacaaacgttgaaacaac gccaGCTGGGTCATGTCTGAAAAGTCGCAAAATAGATccttattcttgat atgcgtaagttatttttctagcggaaacacccgaaaaaatccaggactct gttactaaaaataaaaacacggaggtcaaaatccggcttttttcgagtgc ttccgttaaaagctatgacgtcatcttgatttacgcatatcaagaatcgg agtttttgatttttttaaatagtgATGCAtggtgggattgtttcgggggt attacaatagaattcacTCGAGGAGTtcctctaaaatatttttattgtaa tactcccgaaacaatcccacaatgcatcgcatttttagaaaaatcaaaaa ctccgataagatctatttccttaaatttaaaaggtttttttaaacGAAGT TGATACTGTTTGCTTATTCATTAactttcacattgaattgacacagatgt ggagtaAGATTGTGTCTCAGATGAAACAGGGAAACTCAtgtaaaacaaaa acttttaagaCTTTGACGACTGGTATTTTTCACAAATTCTTTAATGATAA CACGATGTTTTTGGTTTAATTAGTTTATTTGCGTATAGATTGAGCAATAG AAGGCAAATATAGTAAAAATTTCTACCTTTTTATACCTTTTCATTAAGTT TTTGATATAAAGTTGTTTTTGATCCCACCCTGGTTTTTAACAATCTGGTT TTTAAAACTATTAAGAGCGttcagaccccccccccccccgcNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNccccc cccccccccggttacTAGGTTTGCAAGCTGATAAGGGGGTGCCGCCCGAA TTTCGATCCTTGGAATTTTACCCgaactaaaaaagagaaaacaaaggaaa attttgtgaattttgcgACCTTACTAAGACAAATTTTGACTAAATTCCGA TCTTTCCGggtgtgaaaattttgaaatttttctatttctccgacccttag tgggactgaaattttattttctgatttttccaacccttagcggaactttg gaaaatttaaaaaatgtaccCTTACCGTTCCCtctatttgcctaagtacc ccccccccccgggccccccCCCAAATTAGTTAGACAATCCTCCTATCGTc aacacaagatcactaaaaaagggaatagatTAGGAggtgggataaatttg aaaacggtgGTTAACCttgggtggagtaagcagtggcgaaGGAATATAGT TTTCccgtaaaaaaaaacatgttcaaaaatagtcaGAATGTATGAATAGT AAATTTTTATCAGGTTTTGACTTAAAATAATTTCCTTCTTTCTTTCAGGT TTCGAAGTTAAGTGTGACGACACACACTTTGCTGTCTGGTTTAACAAAAC CGCTTTGGATGAAAGACAAGATGGTACCAACAACAACCGAACATGGCAAA TCTATTTCGAAGGTCAACGAGATGATGCCACCTGTACAACATACCATTGG GATACCAGTAAAAACAATGTCAGCTATAATAGCCTTTCAAACCCTACAGG GCTTCCATTTAATGTCCAAATCGGTGCACCAGTCAAAAACTGTGGAATCA ACGTTTTTGCTGATGCAACACACATTATCTACAACACAACACTTATTGTT ACATACGGTCAAAATCCAACTGCTGAAATCGGACGTGAAGAGTATGACAA ATACAATGTCATGTGCTTGAGAAATCGAACGGTTAACGAAATGGTCGATT TTGATGTTGAATTTCGTCAAACTGGAAATGACGCTAAGAGTAAGTTCAAA TTCATTCTTTGTCACGAAAATCACTAAAAGTCGAAGGAAAACAAACACTT CACGGTTCacggtttttataagaacaaactatataagaacatctcGAAAA CATCCGAatgcttcgaaaattttggatgttcttataaaaacacacAATTA ATCTGTTTTTTCCTAAACCTAGCGTCATGCCGTGACGAGGAATAGTGTCT TCCAGCTTGCACGGTACGTTGTTCGGACGTTCAACCAATATCTTGAAAAT GGACGTTATAAACATTAGACGAGAGTTGAAAAAAGTTGTGTGCCATTTGG ATCAATGGCTctttcaatttctattttttagtaACTTCGAAAACTACAAT AGTTTCCTTTCCACACTTTCATAAACAACGTAATGATTAtctgatatttt attttttctattctttttctAGATACTACCGAGGATTACAGTTTCACTTT CACCCACACTGATATGGCTGATGCAACTACATTAGTCTACAATCTTGGAG ACTacatcaaattcaaaatggtcTCAAACACAGCGCAAACTGAAGTAAAA GCTGTGATCCAAAGATGTTGGACTACCACTGACGGATCAGCCAACTCGTA CACTTTGATCAGCGACAGGTATAATCCATTTTTATTTGGATAATAGTAGT CCAAaacttaaaagttttatttttccataAGTGTTaacgtttcatatcag acacatattccatatcaggacagtgtcagCCTATTGCTGTATTATGCTGA TGACCCGGGGGGCACtcaattttgaaaacgaccgtaagTTCGGCCAAAac tcaggtctctaaaatcggacccttgcagtgcaggaaaaaattggctgaaa atcgacccttattgtgcaatttttcaaaaaattttgacatttcTCAAATt ctacacccttacagtgcactttttctcacttgctcacaaatcaaccctta aagtgcactttccaagtccaaaaacctacccttaagggccgcacgtccgg taggtcacttacctggagtgccccccccctccTCAGAGCTGATGTAAGCA AAAAGTAGTTTTTtgctctttctgaccaatcttgctccacatccatgtca atccaatgtgaaaaagcttgtgaaataaaattgatgagtaagcaaacgat atcactcttatttaaaaacaaaacatttaattttcaccatcaaaaattga ataaacttaagttgtttttcgaaatttattgGCAAGATATTCTGATATTG AAATGCAAATCACTTAAGAAAGACCAGTCGGTAGACTAGGAAcatcaata aaaatatattcacaGACTGAATATCCAGGCTATCGTTTGTATTGAAATAT AACATTCTCAAATCTGTACGTACAATTCTGCACAACTGTTTTCTTGTAAA CAAGTGTCTGTAAAAGTGTTGAAAAACTTTGTTGaacggaggtttgaaaa aaaaaactctaatCAAAATAATTCTTTGCTGAGATTGATCAACTGCCTCC AGGTCTATATATAGCTCGGTGGTCATctctcaaaagaaaaagattataGA TAGTTTTGTGGAACATCAAGTGTTTTATAAATTGAGCACTAAcccttatt tttctttatagatGTACCATGGAAACTGGAACTAGCTGGGTTAGTAATCC AAGTGACGCTGAGTCTGTCTTCAAAACCGAAGCTTTCAGATACTTGGCTG CCTCTGAAAACAAAATCTATGCTCAATGCCTTGTCCGTGTTTGTCTGGAT ACTCAAACTAGCGCTGAATGTACACTTTGCACTCCTGGTATCACCCGTAA GAGACGTAGTaccgaagaagaagaagaacccAGTGTTGGACAAATGGCTT TAATAAAATCATCAGTCTTCTACATCATTGAAAGAGgtaaaaaactgttt ttatgCTGGATTTTTATGCCCTTATAACTGAACTTTAGAAGGATAAGGGC TATACCTTGTGATATACCTTATCGGTCAAaattagtcggccttaattatt agttataaattttagtcacctcatcaaaatttagtcattaagggccgact aataattaagttttggccatttttaaatttctagtcggcccaaattttac tCGGCCttaatttttagtcggtcttaattttagtcaccaatcCAAAATTT AGttacttagggccgactaagttttggccgaaaAGGTATACATTTAGCTG TTAGTTCTGGACTCTTTTTATTTGTATAAAAAGTTTAGACAACaattagc ctagaaatctaagctaacTTGATTCAGccactaggataaatctgatggta agttgtgactgaataacaaAATGTATTCAAAGGCAAACtaaaaatccgta aatataaaaaatatttaaagcgTAGAAAATGCTTTAATTTctccttagcg aaagtattttTATAGGCATGGTATGGTAGTATCGGAAAAACatcagaaaa cgaaagtactcgatacagTGGACAAACTcattaaatttaatttgtttttc taccTTTCCTCGGTCACACTCGCCATGTATAAATATTGTGGTCgttttta aatcaagtcctcagaataccaaaaagtgacctttgaagtaacttgtcatt ttcttgacaaagtgacactatttaacaaaaatattgacagggtcaaTAAG TATGATGTTTGTAAGCTTTGTTACACCGAATATTTTgattatgctgaatg agatgcctttagtatgaatagatagaacttgtcagtaggaaaaaattggg aaggccagttttagagatatgaatcttatcaattattctattgtctttat gctgacaaaatgactaatttcgacagaaataacaatctgatgatgaaata caaagcttctcaaaccatttttaaattttgtaccactaattattttgatg ccGATGATACAAAAGGATAGACTTTGCcaccataatcaagctccaagaac tttgaaatggttgttttacgtATTTGGCACGTGACTTTAAatagatgaga caggggtgagcttactcttcaatatataatattcaaatgattaggagagc actctacgttggagaaagGGACAAAGCTCGATAACCCagatttatctggt cgctggtcgtggtcgcctgTCGTGGTCGTAATTTTtggtcgacgtttaga aactccctatAATTTGCTCATCTTCATTGTATTTTAAACAAAcacttcat tttttattattttgttctaCTTGATATGCGTAAATGAAAAACAGAGAGTG GTTATTATGCGTTTAAAATAAAGCGGATTTGGTTGAGTAGCGCAGTCACA TGATATGGACAATATACTTTTCGGTTAATAGTTCCTACagagtaaacaaa ggatggtaTAAAATTCGGGAACATTTTAATTATCATATAAGCATCTACCT TATAAGGATttaatcaataactcttgatagatggggatatacctttcggt aattagttcttacaaggtaaacaagggatggggcacaatatgagcatatt tatttttcttataagtatatactttataagaatcaaatcaataactcttg atagacagggATATACTTttaggtaattagttcttacaaagtagaCAGGG GACTGAGTACTGATTGCAGCATTTTTAATATGGCTCAGCTTTGCTTATTC ATCATAAAAAGTGACCGTGTCCGAACCATTTCTCATGACCCGaccaaaac ctttttttctatttcaccTCGTATTTTTCTTAACAGCTTTTTCAGAGCCG GCATTTTAGCAtactttttgcaaatatttggcgaaattttcgacttcaag tcgtcttgttttgaaagtgttatgcttaattttttcgaccattttcatca tcattttcataATACACTATTACATAAGtatatatacacgttttttatat aaggaacacgtttataaggaactcgaggctgaaaatggtccaaaaaataa ggaattgtttagcaactgctcaggctgagaataagaaaacaagttttaag gaacagtaagagatggttatccaaacttagcaactatttaaataaggaac tcgataaggaactttgaggcttctctgtaaaaataaggaactccaggctc agagcaaagttaaggttccttataaaaaaaaacgtgtaataataCACTAT TATACAAGGaatacactattcttataaaaaaagcgtgtattttttttaat ttgtaaacTATCATTGTCTCATTTTAGACACTCCAGCCCAAGGATCACAA GAATCAGAAAACTTTATGAGTGGAACCAAAGGAGTTGTTGTCATCATTCT CTTGGCAACTTTGGTGTTTGTTATTGCTGCTGCCATTGTCAAGAAAGTTT TCTTCAGTGCTCCAGCTGTTGTTGCATCACCAGTTGTTGCCTACAGTAAT AAAGCTATGGCTTAAATATTAAACACGTTATACAAGAACACAAAAAGTTG ACGCAACAAagtcaaaacatttaaaataattcaagctcttgaaaactttt tttttTGGGTCTACTGTCAAAATTTATTATTGTCCATTTATTGTATCTTC TATTATATACTAAAAGCAGAAGAAATATATTTTATATGCTATTATATTTG AAAGTTTTAAGTATATTGTCTTCGAAAATTATTTTTGTTGTTGTTGTTGT TTTTTTGTTTTTTTTGCGAATGATAGTATAAAAACCTTTTATCGTTTAGA AgtattttgtaatatttttgtttcaaacaGTTATCTTTTTGTCAAGAAAT GTTATTACTTGGTATGTAAAAAA

Coding sequence (CDS) from alignment at scaffold_40:2957..11179+

>TCONS_00063750 ID=TCONS_00063750|Name=TCONS_00063750|organism=Clytia hemisphaerica|type=CDS|length=5940bp|location=Sequence derived from alignment at scaffold_40:2957..11179+ (Clytia hemisphaerica)
ATGGTTTCTCTACGAGTGCTCATCGCGTTCAGCGCTCTGATTGCTTTAGC
ATCTTCTCAAACCTTTGGTGACGGAACCGTTGGTGCAAGTTTCGAAGTTA
AGTGTGACGACACACACTTTGCTGTCTGGTTTAACAAAACCGCTTTGGAT
GAAAGACAAGATGGTACCAACAACAACCGAACATGGCAAATCTATTTCGA
AGGTCAACGAGATGATGCCACCTGTACAACATACCATTGGGATACCAGTA
AAAACAATGTCAGCTATAATAGCCTTTCAAACCCTACAGGGCTTCCATTT
AATGTCCAAATCGGTGCACCAGTCAAAAACTGTGGAATCAACGTTTTTGC
TGATGCAACACACATTATCTACAACACAACACTTATTGTTACATACGGTC
AAAATCCAACTGCTGAAATCGGACGTGAAGAGTATGACAAATACAATGTC
ATGTGCTTGAGAAATCGAACGGTTAACGAAATGGTCGATTTTGATGTTGA
ATTTCGTCAAACTGGAAATGACGCTAAGAATACTACCGAGGATTACAGTT
TCACTTTCACCCACACTGATATGGCTGATGCAACTACATTAGTCTACAAT
CTTGGAGACTacatcaaattcaaaatggtcTCAAACACAGCGCAAACTGA
AGTAAAAGCTGTGATCCAAAGATGTTGGACTACCACTGACGGATCAGCCA
ACTCGTACACTTTGATCAGCGACAGatGTACCATGGAAACTGGAACTAGC
TGGGTTAGTAATCCAAGTGACGCTGAGTCTGTCTTCAAAACCGAAGCTTT
CAGATACTTGGCTGCCTCTGAAAACAAAATCTATGCTCAATGCCTTGTCC
GTGTTTGTCTGGATACTCAAACTAGCGCTGAATGTACACTTTGCACTCCT
GGTATCACCCGTAAGAGACGTAGTaccgaagaagaagaagaacccAGTGT
TGGACAAATGGCTTTAATAAAATCATCAGTCTTCTACATCATTGAAAGAG
ACACTCCAGCCCAAGGATCACAAGAATCAGAAAACTTTATGAGTGGAACC
AAAGGAGTTGTTGTCATCATTCTCTTGGCAACTTTGGTGTTTGTTATTGC
TGCTGCCATTGTCAAGAAAGTTTTCTTCAGTGCTCCAGCTGTTGTTGCAT
CACCAGTTGTTGCCTACAGTAATAAAGCTATGGCTTAAATGGTTTCTCTA
CGAGTGCTCATCGCGTTCAGCGCTCTGATTGCTTTAGCATCTTCTCAAAC
CTTTGGTGACGGAACCGTTGGTGCAAGTTTCGAAGTTAAGTGTGACGACA
CACACTTTGCTGTCTGGTTTAACAAAACCGCTTTGGATGAAAGACAAGAT
GGTACCAACAACAACCGAACATGGCAAATCTATTTCGAAGGTCAACGAGA
TGATGCCACCTGTACAACATACCATTGGGATACCAGTAAAAACAATGTCA
GCTATAATAGCCTTTCAAACCCTACAGGGCTTCCATTTAATGTCCAAATC
GGTGCACCAGTCAAAAACTGTGGAATCAACGTTTTTGCTGATGCAACACA
CATTATCTACAACACAACACTTATTGTTACATACGGTCAAAATCCAACTG
CTGAAATCGGACGTGAAGAGTATGACAAATACAATGTCATGTGCTTGAGA
AATCGAACGGTTAACGAAATGGTCGATTTTGATGTTGAATTTCGTCAAAC
TGGAAATGACGCTAAGAATACTACCGAGGATTACAGTTTCACTTTCACCC
ACACTGATATGGCTGATGCAACTACATTAGTCTACAATCTTGGAGACTac
atcaaattcaaaatggtcTCAAACACAGCGCAAACTGAAGTAAAAGCTGT
GATCCAAAGATGTTGGACTACCACTGACGGATCAGCCAACTCGTACACTT
TGATCAGCGACAGatGTACCATGGAAACTGGAACTAGCTGGGTTAGTAAT
CCAAGTGACGCTGAGTCTGTCTTCAAAACCGAAGCTTTCAGATACTTGGC
TGCCTCTGAAAACAAAATCTATGCTCAATGCCTTGTCCGTGTTTGTCTGG
ATACTCAAACTAGCGCTGAATGTACACTTTGCACTCCTGGTATCACCCGT
AAGAGACGTAGTaccgaagaagaagaagaacccAGTGTTGGACAAATGGC
TTTAATAAAATCATCAGTCTTCTACATCATTGAAAGAGACACTCCAGCCC
AAGGATCACAAGAATCAGAAAACTTTATGAGTGGAACCAAAGGAGTTGTT
GTCATCATTCTCTTGGCAACTTTGGTGTTTGTTATTGCTGCTGCCATTGT
CAAGAAAGTTTTCTTCAGTGCTCCAGCTGTTGTTGCATCACCAGTTGTTG
CCTACAGTAATAAAGCTATGGCTTAAATGGTTTCTCTACGAGTGCTCATC
GCGTTCAGCGCTCTGATTGCTTTAGCATCTTCTCAAACCTTTGGTGACGG
AACCGTTGGTGCAAGTTTCGAAGTTAAGTGTGACGACACACACTTTGCTG
TCTGGTTTAACAAAACCGCTTTGGATGAAAGACAAGATGGTACCAACAAC
AACCGAACATGGCAAATCTATTTCGAAGGTCAACGAGATGATGCCACCTG
TACAACATACCATTGGGATACCAGTAAAAACAATGTCAGCTATAATAGCC
TTTCAAACCCTACAGGGCTTCCATTTAATGTCCAAATCGGTGCACCAGTC
AAAAACTGTGGAATCAACGTTTTTGCTGATGCAACACACATTATCTACAA
CACAACACTTATTGTTACATACGGTCAAAATCCAACTGCTGAAATCGGAC
GTGAAGAGTATGACAAATACAATGTCATGTGCTTGAGAAATCGAACGGTT
AACGAAATGGTCGATTTTGATGTTGAATTTCGTCAAACTGGAAATGACGC
TAAGAATACTACCGAGGATTACAGTTTCACTTTCACCCACACTGATATGG
CTGATGCAACTACATTAGTCTACAATCTTGGAGACTacatcaaattcaaa
atggtcTCAAACACAGCGCAAACTGAAGTAAAAGCTGTGATCCAAAGATG
TTGGACTACCACTGACGGATCAGCCAACTCGTACACTTTGATCAGCGACA
GatGTACCATGGAAACTGGAACTAGCTGGGTTAGTAATCCAAGTGACGCT
GAGTCTGTCTTCAAAACCGAAGCTTTCAGATACTTGGCTGCCTCTGAAAA
CAAAATCTATGCTCAATGCCTTGTCCGTGTTTGTCTGGATACTCAAACTA
GCGCTGAATGTACACTTTGCACTCCTGGTATCACCCGTAAGAGACGTAGT
accgaagaagaagaagaacccAGTGTTGGACAAATGGCTTTAATAAAATC
ATCAGTCTTCTACATCATTGAAAGAGACACTCCAGCCCAAGGATCACAAG
AATCAGAAAACTTTATGAGTGGAACCAAAGGAGTTGTTGTCATCATTCTC
TTGGCAACTTTGGTGTTTGTTATTGCTGCTGCCATTGTCAAGAAAGTTTT
CTTCAGTGCTCCAGCTGTTGTTGCATCACCAGTTGTTGCCTACAGTAATA
AAGCTATGGCTTAAATGGTTTCTCTACGAGTGCTCATCGCGTTCAGCGCT
CTGATTGCTTTAGCATCTTCTCAAACCTTTGGTGACGGAACCGTTGGTGC
AAGTTTCGAAGTTAAGTGTGACGACACACACTTTGCTGTCTGGTTTAACA
AAACCGCTTTGGATGAAAGACAAGATGGTACCAACAACAACCGAACATGG
CAAATCTATTTCGAAGGTCAACGAGATGATGCCACCTGTACAACATACCA
TTGGGATACCAGTAAAAACAATGTCAGCTATAATAGCCTTTCAAACCCTA
CAGGGCTTCCATTTAATGTCCAAATCGGTGCACCAGTCAAAAACTGTGGA
ATCAACGTTTTTGCTGATGCAACACACATTATCTACAACACAACACTTAT
TGTTACATACGGTCAAAATCCAACTGCTGAAATCGGACGTGAAGAGTATG
ACAAATACAATGTCATGTGCTTGAGAAATCGAACGGTTAACGAAATGGTC
GATTTTGATGTTGAATTTCGTCAAACTGGAAATGACGCTAAGAATACTAC
CGAGGATTACAGTTTCACTTTCACCCACACTGATATGGCTGATGCAACTA
CATTAGTCTACAATCTTGGAGACTacatcaaattcaaaatggtcTCAAAC
ACAGCGCAAACTGAAGTAAAAGCTGTGATCCAAAGATGTTGGACTACCAC
TGACGGATCAGCCAACTCGTACACTTTGATCAGCGACAGatGTACCATGG
AAACTGGAACTAGCTGGGTTAGTAATCCAAGTGACGCTGAGTCTGTCTTC
AAAACCGAAGCTTTCAGATACTTGGCTGCCTCTGAAAACAAAATCTATGC
TCAATGCCTTGTCCGTGTTTGTCTGGATACTCAAACTAGCGCTGAATGTA
CACTTTGCACTCCTGGTATCACCCGTAAGAGACGTAGTaccgaagaagaa
gaagaacccAGTGTTGGACAAATGGCTTTAATAAAATCATCAGTCTTCTA
CATCATTGAAAGAGACACTCCAGCCCAAGGATCACAAGAATCAGAAAACT
TTATGAGTGGAACCAAAGGAGTTGTTGTCATCATTCTCTTGGCAACTTTG
GTGTTTGTTATTGCTGCTGCCATTGTCAAGAAAGTTTTCTTCAGTGCTCC
AGCTGTTGTTGCATCACCAGTTGTTGCCTACAGTAATAAAGCTATGGCTT
AAATGGTTTCTCTACGAGTGCTCATCGCGTTCAGCGCTCTGATTGCTTTA
GCATCTTCTCAAACCTTTGGTGACGGAACCGTTGGTGCAAGTTTCGAAGT
TAAGTGTGACGACACACACTTTGCTGTCTGGTTTAACAAAACCGCTTTGG
ATGAAAGACAAGATGGTACCAACAACAACCGAACATGGCAAATCTATTTC
GAAGGTCAACGAGATGATGCCACCTGTACAACATACCATTGGGATACCAG
TAAAAACAATGTCAGCTATAATAGCCTTTCAAACCCTACAGGGCTTCCAT
TTAATGTCCAAATCGGTGCACCAGTCAAAAACTGTGGAATCAACGTTTTT
GCTGATGCAACACACATTATCTACAACACAACACTTATTGTTACATACGG
TCAAAATCCAACTGCTGAAATCGGACGTGAAGAGTATGACAAATACAATG
TCATGTGCTTGAGAAATCGAACGGTTAACGAAATGGTCGATTTTGATGTT
GAATTTCGTCAAACTGGAAATGACGCTAAGAATACTACCGAGGATTACAG
TTTCACTTTCACCCACACTGATATGGCTGATGCAACTACATTAGTCTACA
ATCTTGGAGACTacatcaaattcaaaatggtcTCAAACACAGCGCAAACT
GAAGTAAAAGCTGTGATCCAAAGATGTTGGACTACCACTGACGGATCAGC
CAACTCGTACACTTTGATCAGCGACAGatGTACCATGGAAACTGGAACTA
GCTGGGTTAGTAATCCAAGTGACGCTGAGTCTGTCTTCAAAACCGAAGCT
TTCAGATACTTGGCTGCCTCTGAAAACAAAATCTATGCTCAATGCCTTGT
CCGTGTTTGTCTGGATACTCAAACTAGCGCTGAATGTACACTTTGCACTC
CTGGTATCACCCGTAAGAGACGTAGTaccgaagaagaagaagaacccAGT
GTTGGACAAATGGCTTTAATAAAATCATCAGTCTTCTACATCATTGAAAG
AGACACTCCAGCCCAAGGATCACAAGAATCAGAAAACTTTATGAGTGGAA
CCAAAGGAGTTGTTGTCATCATTCTCTTGGCAACTTTGGTGTTTGTTATT
GCTGCTGCCATTGTCAAGAAAGTTTTCTTCAGTGCTCCAGCTGTTGTTGC
ATCACCAGTTGTTGCCTACAGTAATAAAGCTATGGCTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039972XLOC_039972Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063750-exon-scaffold_40-1491911889:2957..3249TCONS_00063750-exon-scaffold_40-1491911889:2957..3249Clytia hemisphaericaexon
TCONS_00063750-exon-scaffold_40-1510915933:2957..3249TCONS_00063750-exon-scaffold_40-1510915933:2957..3249Clytia hemisphaericaexon
TCONS_00063750-exon-scaffold_40-1575043694:2957..3249TCONS_00063750-exon-scaffold_40-1575043694:2957..3249Clytia hemisphaericaexon
TCONS_00063750-exon-scaffold_40-1491911889:4385..4484TCONS_00063750-exon-scaffold_40-1491911889:4385..4484Clytia hemisphaericaexon
TCONS_00063750-exon-scaffold_40-1510915933:4385..4484TCONS_00063750-exon-scaffold_40-1510915933:4385..4484Clytia hemisphaericaexon
TCONS_00063750-exon-scaffold_40-1575043694:4385..4484TCONS_00063750-exon-scaffold_40-1575043694:4385..4484Clytia hemisphaericaexon
TCONS_00063750-exon-scaffold_40-1491911889:5955..6395TCONS_00063750-exon-scaffold_40-1491911889:5955..6395Clytia hemisphaericaexon
TCONS_00063750-exon-scaffold_40-1510915933:5955..6395TCONS_00063750-exon-scaffold_40-1510915933:5955..6395Clytia hemisphaericaexon
TCONS_00063750-exon-scaffold_40-1575043694:5955..6395TCONS_00063750-exon-scaffold_40-1575043694:5955..6395Clytia hemisphaericaexon
TCONS_00063750-exon-scaffold_40-1491911889:6829..7024TCONS_00063750-exon-scaffold_40-1491911889:6829..7024Clytia hemisphaericaexon
TCONS_00063750-exon-scaffold_40-1510915933:6829..7024TCONS_00063750-exon-scaffold_40-1510915933:6829..7024Clytia hemisphaericaexon
TCONS_00063750-exon-scaffold_40-1575043694:6829..7024TCONS_00063750-exon-scaffold_40-1575043694:6829..7024Clytia hemisphaericaexon
TCONS_00063750-exon-scaffold_40-1491911889:8018..8292TCONS_00063750-exon-scaffold_40-1491911889:8018..8292Clytia hemisphaericaexon
TCONS_00063750-exon-scaffold_40-1510915933:8018..8292TCONS_00063750-exon-scaffold_40-1510915933:8018..8292Clytia hemisphaericaexon
TCONS_00063750-exon-scaffold_40-1575043694:8018..8292TCONS_00063750-exon-scaffold_40-1575043694:8018..8292Clytia hemisphaericaexon
TCONS_00063750-exon-scaffold_40-1491911889:10634..11179TCONS_00063750-exon-scaffold_40-1491911889:10634..11179Clytia hemisphaericaexon
TCONS_00063750-exon-scaffold_40-1510915933:10634..11179TCONS_00063750-exon-scaffold_40-1510915933:10634..11179Clytia hemisphaericaexon
TCONS_00063750-exon-scaffold_40-1575043694:10634..11179TCONS_00063750-exon-scaffold_40-1575043694:10634..11179Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063750-proteinTCONS_00063750-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_40supercontigscaffold_40:2957..11179 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
24.7462 22.9041 30.7246 32.5757 114.055 80.5044 66.5988 76.9329 66.5137 87.2847 56.7991 57.616 1.29916 1.21929 0.33848 1.1381 3442.85 4463.37 0.597302 0.462793 10526.9 9769.09 3559.65 4118.81 5561.87 3809.25 4011.11 3758.89 30.595 22.166
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001507ZP_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00063750 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top