TCONS_00064039 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064039
Unique NameTCONS_00064039
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3344

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064039 ID=TCONS_00064039|Name=TCONS_00064039|organism=Clytia hemisphaerica|type=transcript|length=3344bp
ATCTTTAAGCTGGCTCAGcatttttttggtttaaaaaaatgCTGTTTAAG
CAATATTTACCAAAAAGAGCAATAGTTgccatttttatataaaatactCC
ACTGGTTATCAGATAATGTCTGTGTTGTTAATtgaataccgtcaactgct
cttgggactatctgacaaaacatgggacggcaaaatcgaccaccatttca
ccgaacctccatagtcatttgatttgagttaatgaacggcgtattaaaaa
atacacgatttctctttcgcacccagtaggcttttaaatcaaaatatgaa
aaaaaatccgtagtggaacacacgcgaatgtctggaatgaagaagaccat
attagtggcaaaacaatggagcgCTTGatgtcactcgcgcggcaagttac
acactcattATTTGTTAATCCAATCGGGAGATAGGCGGTTAGGTGGTTAG
GCGGCGGGTGTTCTCTATTTCTCCAAtcagcgtccggtcattttgaatga
aaacaaaaaagttaaaaagggcgcactatcagtgaaagttatcgtgacat
gttatgacagaaattatgattgataaacttggtgaagttatcaaaacaaa
tttgttgtcaaagagatttaacagtaagtgaaaatacatgccagatatca
acagtcccatgtttcgaccaatcgtcccaagttagagcagttgacggtat
taccaaagatttgttgtttgattgtcaaattataatcaaatcaatcaaat
atCACGGTAAATTTAAGTTAGATTgtgtttgattgatttgatcACCTTCG
ATTGATTGATCCTATTCAATGATGTTAGATATAGGTGTTTGATCTTGTTC
AGTTAATTTCAGATTGTTCAATCAAGCGATAAGGCATGTCCGTCTAGTTC
ATGTTGTTCAGCCGAAAATAGCACCCTTCCAAAGGTAGACGACTGGAGTC
GTTTGTAATCCATGTAATTAATACAGTAATATTGGTGTTGTATAAAAATG
TGAGAATTGTTACGTGTCAATATCAGTTTATATGAACAACTGAACTCCCC
TGGTGTTCCTGTCTTATAGTGGGATCTCATTCCGGACACGGAAGAGCAAG
AGCTTGTATTTTGTACAAAGAGCTTTTCTCAGAACGGAAAGGATTTTCTT
GAACGGGTGTGTGAATCAATTTAATCAATCAAAACTTATTCAAATGTAAT
CGAACAACTACCTCTTTTTTTTGTAAAGTCCAAAGCTTGGATATTTCCAA
CAATGTATTTGAGTCAGCTTGCCTAAGGTGGTAATAGTTGGCAAGCAGTG
GTtttgcttcaaaagttttgaaaaagattagGTGGTAATTTCTTTTCCTG
TTTTCGTCCCTTTTTTTTACACTATAAAAGAGAATGTCGCTTTGTTTTGA
CAAAACAGTTACTTCAAAGTTTTAATtgcttaaaaatatataatatttta
tgCTGACACGTGTGCTCTATTAAAAAACGAATTATATAGGAGTTGCTGAA
AATAAATTTGGAACAATAAACTCAAGATGAAATTATTTTCACCGTTGACC
ATTCTTTTTTGTTTATCACTTGgttatttttcaggattttcctACTTCCT
CTCACTGTTTGGACGATGGTTTGCTGACTCCATATTCGGACGTTTCCACG
CAATATTTGGTTCCGTTTTGTTCTATAATATTGGCAATGCTGGTATTGTC
GTCATAGCTTATATTATGAAGAAGGAAAATTATGATTACTATCCCCATTT
CTTCATCATAtcacttatttttatttcactcGGAGCGTCAGGAATGAAAG
CAAACATCTCAACATTTGCTGCAAGACAAGTGATTCACTTTGGTGATATA
CACGTCCGAAAACTGTTCAATCGTTTTTACTGGTTAATTAACTTTGCAGC
TGTAATTTCATGCACATTCGTTGCTTATTTGCAGTTACAAGATTTCTTAT
ATGGGTATTTACCTGGACTTTGTGGCACAGTGTTGGCTACTATAATATTT
ATCTGCAGTAAACGATATTTTGTGATCAAAAGAAGTAACGGCAGCCATTT
AACAGATATATTTAACATTGTGACTCAATCAATAAAGCGTAAATACAAGT
TTCAGAAATCAATTTCTGAGGAGATTCCAAAGCACACAACTTTGGATTTG
CTAGAGTATGGACATATTATGTTCGGAGGGTCATATTCAACAGATCAGAT
TGATATCGTTCGATCATTTTCGAGGATTCTGCTTATCTTTATGACGTTGT
TGGTCTACTGGACAATATATTTTCAGATGCCGTCGGTCTTTTTTTTCCAA
TCGCATTTTTTCGATTTGAAAATTCGAGGATTCCAAATACCGGCTTCTGC
AATGAACTTATTTGACACTTTTTCCATTCTTTTGATGATACAAATCATGG
AACATTTGGTATACCCTTTCTTTCAATACGtcaacattcatctaacaaCT
CTACGTAGAATGGGATTCGGATTTTTCTTGGTAACTCTTTCAATGGTATA
CGCAGCTCTTATTGAACCATATCGGAGACAGAATGTGGATTTTCAAAACA
CGAATATTATAATGAATACAACGTTTCATTGTTCAAATTATACCGTATTA
TGGCAAGCACCACAATTCGTTTTGATTGGATTTAGTGAATTCTTCACCAG
TATTTCCGGTTTAGAGTTCGCTTATTCTCAATCACCTCGTTATCTTCAAG
GGATCGTCATGTCATTATTTCTGACTACCTCTGGTCTTGGTGCTTTCTTG
GGTGCATTGATCGTCAAATTGACGTCTGTATACAAAAAGGAATGGCTGTG
TGAAAACATTAATAAATGTTCGTTAGAATATTATTACTATCTTCTGGCTG
GTTTATCGCTACTAAACTTATTAATTTTTATGGTTGTTTCGAAAAACTTT
TCTTATTCCGTACCATTTATTGGGACTATTTCACATTCTCGATCGTCCAG
ATCCTTGGCCACACCTACTGATATTTCTGATATCACAGATTTAGCTTCGG
ATGCAAATGGCGTAAGTTCACGGATTGATTTGAGTAGACAGTCATCTTTT
GAGGATGTCGATTCAATATCTCGCTCAAGTAACGACTGAACTGGGTCCTT
AATTTATTGAATCCTATTCTATCGCTACAggatttttttacgttttttac
ccGTACATACTTAAGTGGAAACTCAAATGATTTGCGAAAGAACTAGTAAC
CTTCGTTGAATTAAATAAAGGCACGAGTTGGAATATATAGTTTCTGAAAA
CAACAACATGTATTCATCCCTCTCAATCAAAAACCCACTCGTCGTGTTAT
AGTTGTGTTATGGCAGAAACTGGCTTCAATTCAGCATGtctatt
Run BLAST on NCBI

protein sequence of TCONS_00064039-protein

>TCONS_00064039-protein ID=TCONS_00064039-protein|Name=TCONS_00064039-protein|organism=Clytia hemisphaerica|type=polypeptide|length=520bp
MKLFSPLTILFCLSLGYFSGFSYFLSLFGRWFADSIFGRFHAIFGSVLFY
NIGNAGIVVIAYIMKKENYDYYPHFFIISLIFISLGASGMKANISTFAAR
QVIHFGDIHVRKLFNRFYWLINFAAVISCTFVAYLQLQDFLYGYLPGLCG
TVLATIIFICSKRYFVIKRSNGSHLTDIFNIVTQSIKRKYKFQKSISEEI
PKHTTLDLLEYGHIMFGGSYSTDQIDIVRSFSRILLIFMTLLVYWTIYFQ
MPSVFFFQSHFFDLKIRGFQIPASAMNLFDTFSILLMIQIMEHLVYPFFQ
YVNIHLTTLRRMGFGFFLVTLSMVYAALIEPYRRQNVDFQNTNIIMNTTF
HCSNYTVLWQAPQFVLIGFSEFFTSISGLEFAYSQSPRYLQGIVMSLFLT
TSGLGAFLGALIVKLTSVYKKEWLCENINKCSLEYYYYLLAGLSLLNLLI
FMVVSKNFSYSVPFIGTISHSRSSRSLATPTDISDITDLASDANGVSSRI
DLSRQSSFEDVDSISRSSND
Run BLAST on NCBI

transcript from alignment at scaffold_407:168242..172820+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064039 ID=TCONS_00064039|Name=TCONS_00064039|organism=Clytia hemisphaerica|type=transcript|length=4579bp|location=Sequence derived from alignment at scaffold_407:168242..172820+ (Clytia hemisphaerica)
ATCTTTAAGCTGGCTCAGcatttttttggtttaaaaaaatgCTGTTTAAG
CAATATTTACCAAAAAGAGCAATAGTTgccatttttatataaaatactCC
ACTGGTTATCAGATAATGTCTGTGTTGTTAATtgaataccgtcaactgct
cttgggactatctgacaaaacatgggacggcaaaatcgaccaccatttca
ccgaacctccatagtcatttgatttgagttaatgaacggcgtattaaaaa
atacacgatttctctttcgcacccagtaggcttttaaatcaaaatatgaa
aaaaaatccgtagtggaacacacgcgaatgtctggaatgaagaagaccat
attagtggcaaaacaatggagcgCTTGatgtcactcgcgcggcaagttac
acactcattATTTGTTAATCCAATCGGGAGATAGGCGGTTAGGTGGTTAG
GCGGCGGGTGTTCTCTATTTCTCCAAtcagcgtccggtcattttgaatga
aaacaaaaaagttaaaaagggcgcactatcagtgaaagttatcgtgacat
gttatgacagaaattatgattgataaacttggtgaagttatcaaaacaaa
tttgttgtcaaagagatttaacagtaagtgaaaatacatgccagatatca
acagtcccatgtttcgaccaatcgtcccaagttagagcagttgacggtat
taccaaagatttgttgtttgattgtcaaattataatcaaatcaatcaaat
atCACGGTAAATTTAAGTTAGATTgtgtttgattgatttgatcACCTTCG
ATTGATTGATCCTATTCAATGATGTTAGATATAGGTGTTTGATCTTGTTC
AGTTAATTTCAGATTGTTCAATCAAGCGATAAGGCATGTCCGTCTAGTTC
ATGTTGTTCAGCCGAAAATAGCACCCTTCCAAAGGTAGACGACTGGAGTC
GTTTGTAATCCATGTAATTAATACAGTAATATTGGTGTTGTATAAAAATG
TGAGAATTGTTACGTGTCAATATCAGTTTATATGAACAACTGAACTCCCC
TGGTGTTCCTGTCTTATAGTGGGATCTCATTCCGGACACGGAAGAGCAAG
AGCTTGTATTTTGTACAAAGAGCTTTTCTCAGAACGGAAAGGATTTTCTT
GAACGGGTGTGTGAATCAATTTAATCAATCAAAACTTATTCAAATGTAAT
CGAACAACTACCTCTTTTTTTTGTAAAGTCCAAAGCTTGGATATTTCCAA
CAATGTATTTGAGTCAGCTTGCCTAAGGTGGTAATAGTTGGCAAGCAGTG
GTtttgcttcaaaagttttgaaaaagattagGTGGTAATTTCTTTTCCTG
TTTTCGTCCCTTTTTTTTACACTATAAAAGAGAATGTCGCTTTGTTTTGA
CAAAACAGTTACTTCAAAGTTTTAATtgcttaaaaatatataatatttta
tgCTGACACGTGTGCTCTATTAAAAAACGAATTATATAGGAGTTGCTGAA
AATAAATTTGGAACAATAAACTCAAGATGAAATTATTTTCACCGTTGACC
ATTCTTTTTTGTTTATCACTTGgttatttttcaggattttcctACTTCCT
CTCACTGTTTGGACGATGGTTTGCTGACTCCATATTCGGACGTTTCCACG
CAATATTTGGTTCCGTTTTGTTCTATAATATTGGCAATGCTGGTATTGTC
GTCATAGCTTATATTATGAAGAAGGAAAATTATGATTACTATCCCCATTT
CTTCATCATAtcacttatttttatttcactcGGAGCGTCAGGAATGAAAG
CAAACATCTCAACATTTGCTGCAAGACAAGTGATTCACTTTGGTGATATA
CACGTCCGAAAACTGTTCAATCGTTTTTACTGGTTAATTAACTTTGCAGC
TGTAATTTCATGCACATTCGTTGCTTATTTGCAGTTACAAGATTTCTTAT
ATGGGTATTTACCTGGACTTTGTGGCACAGTGTTGGCTACTATAATATTT
ATCTGCAGTAAACGATATTTTGTGATCAAAAGAAGTAACGGCAGCCATTT
AACAGATATATTTAACATTGTGACTCAATCAATAAAGCGTAAATACAAGT
TTCAGAAATCAATTTCTGAGGAGATTCCAAAGCACACAACTTTGGATTTG
CTAGAGTATGGACATATTATGTTCGGAGGGTCATATTCAACAGATCAGAT
TGATATCGTTCGATCATTTTCGAGGATTCTGCTTATCTTTATGACGTTGT
TGGTCTACTGGACAATATATTTTCAGGTAAGGGATTTTCTCCTAATTCTT
ATTGAAAATCTCTGTTTTAGCCTTCTTTGTTAAAAGTTCATAGTAATTTT
GTAAAAGTTCCGATAGGAAAGATAAAGCAAACAATCAAATCACTTAGAGA
ATTTCAAACTGctgagaatttcaaaattctttcccagttagttttatttt
tcttggaGACAAGGAAAGGATTAAAGAGAAACACATGCTACTTCgatttc
aaataatttcaattcAATGTTAATTATGTTTCTTTATCTTTAGATGCCGT
CGGTCTTTTTTTTCCAATCGCATTTTTTCGATTTGAAAATTCGAGGATTC
CAAATACCGGCTTCTGCAATGAACTTATTTGACACTTTTTCCATTCTTTT
GATGATACAAATCATGGAACATTTGGTATACCCTTTCTTTCAATACGtca
acattcatctaacaaCTCTACGTAGAATGGGATTCGGATTTTTCTTGGTA
ACTCTTTCAATGGTATACGCAGCTCTTATTGAACCATATCGGAGACAGAA
TGTGGATTTTCAAAACACGAATATTATAATGAATACAACGTTTCATTGTT
CAAATTATACCGTATTATGGCAAGCACCACAATTCGTTTTGATTGGATTT
AGTGAATTCTTCACCAGTATTTCCGGTAAGTTTTTTTGTAGGAAAGAAAA
GAATAAGAGAGGGATAGGTTATCAGATGTCCCAGTGCTAAAGTTGATAta
gttttctttcaataaaagtacATGACTTAAAGTTTCGTGCTTTTGGGTGA
AATGTGCTACGGTTTTTTTATGCAGCACAGTGGCCACTTCTCCCTTGTAT
ATTGCGctgttctttttttaaatccatacagggggtgaaCGTACCTTTTC
AATCCAAAAATAACTCTTGAAAATGTGTGATACCCTCTGGAAAATATGCT
AAAataattggaaaaattcttctttATGGGGTGGACGAATTAAAATCAGA
TTTTTACACCTTAGAAgtttttgaatattattttcgccctggaaaaatga
aaaaagacttTTCTTAGAACTCCCCTGAAACTTCTTTTTaggattacccc
ctggaaatgtatggagataaaatggaatggccaaTTATTTACCGTTGAAA
ATTAGGTTCTAGTTGTGTAAAAGAACTATGTACCACTGTTACTGTTTAAC
aatattttaggtttttgacTCTAAACACGACTAAAGAAAAGCcagtattt
cattttttgtgactTTGAGGGACTTGGAAATGAGCCAGAGTTGTTCTTAA
TGAAAGATCGTAAGCTAGCACTTGAGTTCAAATAGCACTTTTCTTGTTTT
CGTATTCGTAAAGTTCGAGACATCTCTGTCTCACAGCACCGATAGCCccg
gggatagaaattctattgttccaagcttaaaaaatccagttgggatggtt
ttggattacaatttttccatttaatttcgaatggggatgaaatcaaagtc
aatttgcCACTAAGGGTGAAACTGTACGGTATTTTTCCACAGggaacgaa
attttggccaaattttgtAGTGTGGCGGGGGTTCCACCGGTTCTGTGACA
CGGAGAATGAAAGGTAACAATATATTTCCCTTTCCTTTTTCAGGTTTAGA
GTTCGCTTATTCTCAATCACCTCGTTATCTTCAAGGGATCGTCATGTCAT
TATTTCTGACTACCTCTGGTCTTGGTGCTTTCTTGGGTGCATTGATCGTC
AAATTGACGTCTGTATACAAAAAGGAATGGCTGTGTGAAAACATTAATAA
ATGTTCGTTAGAATATTATTACTATCTTCTGGCTGGTTTATCGCTACTAA
ACTTATTAATTTTTATGGTTGTTTCGAAAAACTTTTCTTATTCCGTACCA
TTTATTGGGACTATTTCACATTCTCGATCGTCCAGATCCTTGGCCACACC
TACTGATATTTCTGATATCACAGATTTAGCTTCGGATGCAAATGGCGTAA
GTTCACGGATTGATTTGAGTAGACAGTCATCTTTTGAGGATGTCGATTCA
ATATCTCGCTCAAGTAACGACTGAACTGGGTCCTTAATTTATTGAATCCT
ATTCTATCGCTACAggatttttttacgttttttacccGTACATACTTAAG
TGGAAACTCAAATGATTTGCGAAAGAACTAGTAACCTTCGTTGAATTAAA
TAAAGGCACGAGTTGGAATATATAGTTTCTGAAAACAACAACATGTATTC
ATCCCTCTCAATCAAAAACCCACTCGTCGTGTTATAGTTGTGTTATGGCA
GAAACTGGCTTCAATTCAGCATGtctatt

Coding sequence (CDS) from alignment at scaffold_407:168242..172820+

>TCONS_00064039 ID=TCONS_00064039|Name=TCONS_00064039|organism=Clytia hemisphaerica|type=CDS|length=4689bp|location=Sequence derived from alignment at scaffold_407:168242..172820+ (Clytia hemisphaerica)
ATGAAATTATTTTCACCGTTGACCATTCTTTTTTGTTTATCACTTGgtta
tttttcaggattttcctACTTCCTCTCACTGTTTGGACGATGGTTTGCTG
ACTCCATATTCGGACGTTTCCACGCAATATTTGGTTCCGTTTTGTTCTAT
AATATTGGCAATGCTGGTATTGTCGTCATAGCTTATATTATGAAGAAGGA
AAATTATGATTACTATCCCCATTTCTTCATCATAtcacttatttttattt
cactcGGAGCGTCAGGAATGAAAGCAAACATCTCAACATTTGCTGCAAGA
CAAGTGATTCACTTTGGTGATATACACGTCCGAAAACTGTTCAATCGTTT
TTACTGGTTAATTAACTTTGCAGCTGTAATTTCATGCACATTCGTTGCTT
ATTTGCAGTTACAAGATTTCTTATATGGGTATTTACCTGGACTTTGTGGC
ACAGTGTTGGCTACTATAATATTTATCTGCAGTAAACGATATTTTGTGAT
CAAAAGAAGTAACGGCAGCCATTTAACAGATATATTTAACATTGTGACTC
AATCAATAAAGCGTAAATACAAGTTTCAGAAATCAATTTCTGAGGAGATT
CCAAAGCACACAACTTTGGATTTGCTAGAGTATGGACATATTATGTTCGG
AGGGTCATATTCAACAGATCAGATTGATATCGTTCGATCATTTTCGAGGA
TTCTGCTTATCTTTATGACGTTGTTGGTCTACTGGACAATATATTTTCAG
ATGCCGTCGGTCTTTTTTTTCCAATCGCATTTTTTCGATTTGAAAATTCG
AGGATTCCAAATACCGGCTTCTGCAATGAACTTATTTGACACTTTTTCCA
TTCTTTTGATGATACAAATCATGGAACATTTGGTATACCCTTTCTTTCAA
TACGtcaacattcatctaacaaCTCTACGTAGAATGGGATTCGGATTTTT
CTTGGTAACTCTTTCAATGGTATACGCAGCTCTTATTGAACCATATCGGA
GACAGAATGTGGATTTTCAAAACACGAATATTATAATGAATACAACGTTT
CATTGTTCAAATTATACCGTATTATGGCAAGCACCACAATTCGTTTTGAT
TGGATTTAGTGAATTCTTCACCAGTATTTCCGGTTTAGAGTTCGCTTATT
CTCAATCACCTCGTTATCTTCAAGGGATCGTCATGTCATTATTTCTGACT
ACCTCTGGTCTTGGTGCTTTCTTGGGTGCATTGATCGTCAAATTGACGTC
TGTATACAAAAAGGAATGGCTGTGTGAAAACATTAATAAATGTTCGTTAG
AATATTATTACTATCTTCTGGCTGGTTTATCGCTACTAAACTTATTAATT
TTTATGGTTGTTTCGAAAAACTTTTCTTATTCCGTACCATTTATTGGGAC
TATTTCACATTCTCGATCGTCCAGATCCTTGGCCACACCTACTGATATTT
CTGATATCACAGATTTAGCTTCGGATGCAAATGGCGTAAGTTCACGGATT
GATTTGAGTAGACAGTCATCTTTTGAGGATGTCGATTCAATATCTCGCTC
AAGTAACGACTGAATGAAATTATTTTCACCGTTGACCATTCTTTTTTGTT
TATCACTTGgttatttttcaggattttcctACTTCCTCTCACTGTTTGGA
CGATGGTTTGCTGACTCCATATTCGGACGTTTCCACGCAATATTTGGTTC
CGTTTTGTTCTATAATATTGGCAATGCTGGTATTGTCGTCATAGCTTATA
TTATGAAGAAGGAAAATTATGATTACTATCCCCATTTCTTCATCATAtca
cttatttttatttcactcGGAGCGTCAGGAATGAAAGCAAACATCTCAAC
ATTTGCTGCAAGACAAGTGATTCACTTTGGTGATATACACGTCCGAAAAC
TGTTCAATCGTTTTTACTGGTTAATTAACTTTGCAGCTGTAATTTCATGC
ACATTCGTTGCTTATTTGCAGTTACAAGATTTCTTATATGGGTATTTACC
TGGACTTTGTGGCACAGTGTTGGCTACTATAATATTTATCTGCAGTAAAC
GATATTTTGTGATCAAAAGAAGTAACGGCAGCCATTTAACAGATATATTT
AACATTGTGACTCAATCAATAAAGCGTAAATACAAGTTTCAGAAATCAAT
TTCTGAGGAGATTCCAAAGCACACAACTTTGGATTTGCTAGAGTATGGAC
ATATTATGTTCGGAGGGTCATATTCAACAGATCAGATTGATATCGTTCGA
TCATTTTCGAGGATTCTGCTTATCTTTATGACGTTGTTGGTCTACTGGAC
AATATATTTTCAGATGCCGTCGGTCTTTTTTTTCCAATCGCATTTTTTCG
ATTTGAAAATTCGAGGATTCCAAATACCGGCTTCTGCAATGAACTTATTT
GACACTTTTTCCATTCTTTTGATGATACAAATCATGGAACATTTGGTATA
CCCTTTCTTTCAATACGtcaacattcatctaacaaCTCTACGTAGAATGG
GATTCGGATTTTTCTTGGTAACTCTTTCAATGGTATACGCAGCTCTTATT
GAACCATATCGGAGACAGAATGTGGATTTTCAAAACACGAATATTATAAT
GAATACAACGTTTCATTGTTCAAATTATACCGTATTATGGCAAGCACCAC
AATTCGTTTTGATTGGATTTAGTGAATTCTTCACCAGTATTTCCGGTTTA
GAGTTCGCTTATTCTCAATCACCTCGTTATCTTCAAGGGATCGTCATGTC
ATTATTTCTGACTACCTCTGGTCTTGGTGCTTTCTTGGGTGCATTGATCG
TCAAATTGACGTCTGTATACAAAAAGGAATGGCTGTGTGAAAACATTAAT
AAATGTTCGTTAGAATATTATTACTATCTTCTGGCTGGTTTATCGCTACT
AAACTTATTAATTTTTATGGTTGTTTCGAAAAACTTTTCTTATTCCGTAC
CATTTATTGGGACTATTTCACATTCTCGATCGTCCAGATCCTTGGCCACA
CCTACTGATATTTCTGATATCACAGATTTAGCTTCGGATGCAAATGGCGT
AAGTTCACGGATTGATTTGAGTAGACAGTCATCTTTTGAGGATGTCGATT
CAATATCTCGCTCAAGTAACGACTGAATGAAATTATTTTCACCGTTGACC
ATTCTTTTTTGTTTATCACTTGgttatttttcaggattttcctACTTCCT
CTCACTGTTTGGACGATGGTTTGCTGACTCCATATTCGGACGTTTCCACG
CAATATTTGGTTCCGTTTTGTTCTATAATATTGGCAATGCTGGTATTGTC
GTCATAGCTTATATTATGAAGAAGGAAAATTATGATTACTATCCCCATTT
CTTCATCATAtcacttatttttatttcactcGGAGCGTCAGGAATGAAAG
CAAACATCTCAACATTTGCTGCAAGACAAGTGATTCACTTTGGTGATATA
CACGTCCGAAAACTGTTCAATCGTTTTTACTGGTTAATTAACTTTGCAGC
TGTAATTTCATGCACATTCGTTGCTTATTTGCAGTTACAAGATTTCTTAT
ATGGGTATTTACCTGGACTTTGTGGCACAGTGTTGGCTACTATAATATTT
ATCTGCAGTAAACGATATTTTGTGATCAAAAGAAGTAACGGCAGCCATTT
AACAGATATATTTAACATTGTGACTCAATCAATAAAGCGTAAATACAAGT
TTCAGAAATCAATTTCTGAGGAGATTCCAAAGCACACAACTTTGGATTTG
CTAGAGTATGGACATATTATGTTCGGAGGGTCATATTCAACAGATCAGAT
TGATATCGTTCGATCATTTTCGAGGATTCTGCTTATCTTTATGACGTTGT
TGGTCTACTGGACAATATATTTTCAGATGCCGTCGGTCTTTTTTTTCCAA
TCGCATTTTTTCGATTTGAAAATTCGAGGATTCCAAATACCGGCTTCTGC
AATGAACTTATTTGACACTTTTTCCATTCTTTTGATGATACAAATCATGG
AACATTTGGTATACCCTTTCTTTCAATACGtcaacattcatctaacaaCT
CTACGTAGAATGGGATTCGGATTTTTCTTGGTAACTCTTTCAATGGTATA
CGCAGCTCTTATTGAACCATATCGGAGACAGAATGTGGATTTTCAAAACA
CGAATATTATAATGAATACAACGTTTCATTGTTCAAATTATACCGTATTA
TGGCAAGCACCACAATTCGTTTTGATTGGATTTAGTGAATTCTTCACCAG
TATTTCCGGTTTAGAGTTCGCTTATTCTCAATCACCTCGTTATCTTCAAG
GGATCGTCATGTCATTATTTCTGACTACCTCTGGTCTTGGTGCTTTCTTG
GGTGCATTGATCGTCAAATTGACGTCTGTATACAAAAAGGAATGGCTGTG
TGAAAACATTAATAAATGTTCGTTAGAATATTATTACTATCTTCTGGCTG
GTTTATCGCTACTAAACTTATTAATTTTTATGGTTGTTTCGAAAAACTTT
TCTTATTCCGTACCATTTATTGGGACTATTTCACATTCTCGATCGTCCAG
ATCCTTGGCCACACCTACTGATATTTCTGATATCACAGATTTAGCTTCGG
ATGCAAATGGCGTAAGTTCACGGATTGATTTGAGTAGACAGTCATCTTTT
GAGGATGTCGATTCAATATCTCGCTCAAGTAACGACTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040151XLOC_040151Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064039-proteinTCONS_00064039-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064039-exon-scaffold_407-1491911889:168242..170517TCONS_00064039-exon-scaffold_407-1491911889:168242..170517Clytia hemisphaericaexon
TCONS_00064039-exon-scaffold_407-1510915933:168242..170517TCONS_00064039-exon-scaffold_407-1510915933:168242..170517Clytia hemisphaericaexon
TCONS_00064039-exon-scaffold_407-1575043694:168242..170517TCONS_00064039-exon-scaffold_407-1575043694:168242..170517Clytia hemisphaericaexon
TCONS_00064039-exon-scaffold_407-1491911889:170785..171166TCONS_00064039-exon-scaffold_407-1491911889:170785..171166Clytia hemisphaericaexon
TCONS_00064039-exon-scaffold_407-1510915933:170785..171166TCONS_00064039-exon-scaffold_407-1510915933:170785..171166Clytia hemisphaericaexon
TCONS_00064039-exon-scaffold_407-1575043694:170785..171166TCONS_00064039-exon-scaffold_407-1575043694:170785..171166Clytia hemisphaericaexon
TCONS_00064039-exon-scaffold_407-1491911889:172135..172820TCONS_00064039-exon-scaffold_407-1491911889:172135..172820Clytia hemisphaericaexon
TCONS_00064039-exon-scaffold_407-1510915933:172135..172820TCONS_00064039-exon-scaffold_407-1510915933:172135..172820Clytia hemisphaericaexon
TCONS_00064039-exon-scaffold_407-1575043694:172135..172820TCONS_00064039-exon-scaffold_407-1575043694:172135..172820Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_407supercontigscaffold_407:168242..172820 +
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.22133	5.17568	2.09075	2.26351	1.71846	1.21569	1.15306	1.46561	1.01816	1.38507	0.846238	1.08832	1.01071	1.21029	2.23011	2.23297	1.23988	1.22828	1.94076	1.17139	1.14923	1.20571	3.40032	3.2403	1.85486	3.03288	0.930979	1.02152	3.08193	2.58197
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000109POT_fam
IPR020846MFS_dom
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006810 transport
cellular_component GO:0016020 membrane
molecular_function GO:0005215 transporter activity
Blast
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BLAST of TCONS_00064039 vs. Swiss-Prot (Human)
Match: S15A4 (Solute carrier family 15 member 4 OS=Homo sapiens GN=SLC15A4 PE=1 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 2.707e-54
Identity = 124/368 (33.70%), Postives = 204/368 (55.43%), Query Frame = 3 
Query: 1782 GASGMKANISTFAARQVIHFGDIHVRKLFNRFYWLINFAAVISCTFVAYLQLQ-DFLYGY-LPGLCGTVLATIIFICSKRYFVIKRSNGSHLTDIFNIVTQSI---KRKYKFQKS-----ISEEIPKHTTLDLLEYGHIMFGGSYSTDQIDIVRSFSRILLIFMTLLVYWTIYFQMPSVFFFQS------HFFDLKIRGFQIPASAMNLFDTFSILLMIQIMEHLVYPFFQYVNIHLTTLRRMGFGFFLVTLSMVYAALIEPYRRQNVDFQNTN-IIMNTTFHCSNYTVLWQAPQFVLIGFSEFFTSISGLEFAYSQSPRYLQGIVMSLFLTTSGLGAFLGALIVKLTSVYKKEWLCE-----NINKC 2819
            G + +KANI+ F A QV   G    R+ FN FYW IN  A++S   +AY+Q    F+ GY +P +C   LA ++F+C +  F+ K  +GS  TD+F I+T S    KR  + Q +     + ++  K +  D  +  H   GG ++ ++++ V++  +I+ +F+ L+ YWT+YFQM + +  QS         ++      +PA+ + +FD   ILL+I + + LV P  +   +  ++L+R+  G F V  S   A ++E  R   V  +  N  I N  +H ++ ++ WQ PQ++LIG SE F SI+GLEFAYS +P+ +Q  +M LF   SG+G+F+G+ ++ L S+    W+       NIN C
Sbjct:  167 GVATVKANITPFGADQVKDRGPEATRRFFNWFYWSINLGAILSLGGIAYIQQNVSFVTGYAIPTVC-VGLAFVVFLCGQSVFITKPPDGSAFTDMFKILTYSCCSQKRSGERQSNGEGIGVFQQSSKQSLFDSCKMSH---GGPFTEEKVEDVKALVKIVPVFLALIPYWTVYFQMQTTYVLQSLHLRIPEISNITTTPHTLPAAWLTMFDAVLILLLIPLKDKLVDPILRRHGLLPSSLKRIAVGMFFVMCSAFAAGILESKRLNLVKEKTINQTIGNVVYHAADLSLWWQVPQYLLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGVGSFVGSGLLALVSIKAIGWMSSHTDFGNINGC 530
The following BLAST results are available for this feature:
BLAST of TCONS_00064039 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
S15A42.707e-5433.70Solute carrier family 15 member 4 OS=Homo sapiens ... [more]
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