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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00064097 ID=TCONS_00064097|Name=TCONS_00064097|organism=Clytia hemisphaerica|type=transcript|length=3318bp
GTTGCAACATTGGTAATTCATGGCTGgctttctttaaaaagaaaacaggg
AAAATCAAACAACCCCTGGGACCAACTTTCTAAAGTTGTTTTAATTAAtc
attttttgtataaaagtctcgaaattctttttttattgaatattcaaTAG
AATTTCGATGAACTTCCAAAGGAAATTTTGTGGAAATTCCCAAGCCCTTT
TGACTTCCTCCTAATTTCTTCTTTGAAAATCTTCCACCTGAGACATTCTT
ACTCAgaccattttttttttacttttaaaacatgaaaaatattacagcaa
actttttaaatatctaataaaactgtaaaaattgatataaaattaTCACA
GCTCTTTGCTTCAAAACGTTTTAGACGGCCAGGGCTTATGCCTGTATTTG
TGCTCCTtctttcaattttacttttggAGTACACAATTGTGGCCCAATGG
TCGCTATTATGTAAAACTTCATCAACTGTTTACagggaaaaaagataaat
tttgcaACTGAACGaattcttcaaaaaactgaCCTAACACCTTTTGCTTC
AAATGGTCCAAAAGCTATTAAAAATATGCTATCAATAATTCTTtagtaaa
atcattttcaaatcaaatgtttGTGTAATATGTATATCCCCAAGGATGAT
CTAGCCACCCTTTACCAATCTTGCAAAATGCTACAATCTGACGGTATATA
TATTTGGCCAATGTAGCATGTTCTAGAAAGAAATGTGGTACATGCTCTTT
AGTTTCCATAAACCATTGTAGTTTGCTCAATATGTTTATTCCCCATTCTC
TGTCATTGATTTTACTGAGTGAATCTAAACCATGTTTCGTCAATTCATCA
AGTACTAAGTGGAAAGCACATGTCTTAAGAATGTAACTTGAAATAACACA
ATTTGCACCTGTTGGACAAATCCTTTCATCGCGGATAAACTTTGCAATTT
TGTACCCAGACCTTACATTCTCAGGTAACGATTGAAAAATTTTCGTTTCC
AGGTTTGAAAATGAGAAACGCCAAAGTAGATCTCCTCTTTCATTGTACCA
GTCCTTTGCCTGTTTAGGAACCAATAATGTTTGGCGTAAAGCGCTGCGTA
AATCAATGTATTTGCTCAATGCTTCTAAATTGGAAGACTTGTGTACATCA
TGTGTAATCATTAAAGTTGGAACTATGTCTATAGAAATCTTTTTACATTT
GTAATTCTTTCCATTCCAAACCAAAATTATTGTAGCTATGCTCTTTTGAT
AACTTTTCTCCCAAGTCAAATGAAGGCCATCCCAAACTTCAGCTTCTGTT
ATTGCTTTAGCGATGACATTACAGAATTGTTTACCAACAGCCTTTGCGGA
AAGGTAGAGATTTTTGTTAAACTTTCGCAAAAGGTAATTATACTCTGTTG
ACTGGTGGTTATGAGTCCTAAGTCTCACATGTGCAGGTGAAAAATCACTC
TCCTCCAAAGTTAATTGTAAATCAGTTGATAAAATCTCTAAATGACACAA
AAAGTCTACCTCGTCAAGAATTCCAACTTTGGTACCTTCTGCATTACTAC
CTGAGAGAACTGGTATAAATGTGAGTTTATCATCTTGTCTCCTGATCACA
TTTGACATACGTCTTAGCAGCTCAGTCACTTCATTTTTTATGTCTTGATT
TTCAGATATACGTATCCTTTctaaatttaagatttgttCCAAAGCTGATT
GTTTGGTTCCTTCAGCTTTCTCTTTCGTAATTGCTGCTGCTGTCTGTTGC
TTCAACCAGTCCTGATAGTTGTCCCAacccaaatcaattttttttgttgg
gATTAATTCTCCTATTTCATCATTTCCTTTTAACCGTTCAATCTCTGTAA
CAATATTAGGAAATTCGTTGAAATTGGCCACTGAACGTAACCGTTGGTAT
AAAGTATCATCAACTTTGTAACAAGGATATAACTTTTTCAGAGTCTCAAT
ATTCCCTGTGGCTGCAGCATAAACTATAGGAATGTCACCGTAACAGTCCT
TGGCATTTAGGTCAGTCTCCTTGTATGTCAAAAACATCTCAAGAGTAAGT
GAGCTTTCAACTGACGCATAATGCAGACTGGTTAAACCAATTTTATCTGT
TAAGTTTATGTCAGCTCCATTTGATAACAGTATACAGCAACATTCATTCG
AAACTGCATGAATCAAAGGAGACTTTAAATCATTGTCTTGTTCATTGACA
TTTAAAAAACTTTGTTTACAGAGATAGTTTAGTATACAATCTTTTTCTGG
ATGAGCTTCAGATCTAATACAACTATGCAATGGTGTAAAACCAAGCTTAT
TTTTTGTAGACCAATTGGAAGAATTCTGAACAATTATTTCCACTATAGAT
AAATACTTTTTAGCAGGTACATTTGAATTAATTACCCCTGCATTTAGGTA
TTGGTTTAAAAGTGAGTTACCAAGTTCAtcagtttttttcaaatcagcAC
CATAAGTTTGGAGTAACTGtaagcatttttcaaaatcatccaCGTCAACA
TTTTTGGGACTTAAACGAGCTAAAAAAAATGTAGCTAACTGGATTTGTTT
ATTGTCTATTTTTCCATAATGCAACAAAACCCGAACAGCTGAAAACTGCA
AATTGTTGATAGCTAGGAACAAAGGAGTGTGATCATTATAATTCGTTGCA
TTGACATTTGCTCCACACTCAATCAATAAGGGGATAAGCATACAGCTGCA
CTTAAAGCTTTCTTCATtgttgaagttttctttttgatgaaattggtTTT
CATGTTGTATAATGACTTGATGTAATAGTGTGTGTCCAAATGGCTTTATT
CTTCCCTTCAGCACCCCTTCGGGATCAAGAAGCAGTGGTATGATACGAAA
GCAAGTGGGATAAAGTACCCCTACAAGCTTATCTTTAAGTTGTTCATAAA
ATGTTAGTTTGTAAGAAGGGTCTTCTTTACTGTAGTTAGGATTTTTATCA
TAGTACTCTGACAGCTCTGgtgtataatattttttaataatacTTTCAAT
GCCTTGTTGGATGTACTTAAAAAGCACATCAAATTCTTGTTCCTTACAAG
TCCATTtgtctttgaatttcttttcctGTGTATATTTTATCATGTATTCC
AAAATATCTTTTGTGACTTCGTCAGACTttatatcattaaaatgttctat
tGTTGGAAACTTTTCAATTATGTAATTCATACAAAAGCTTCTCGCCACCT
CCATAGTTTGCTCTTCTTGCCCTATAATGATAGAAAGAGGAAATAATATt
tatcttaaaaacttttttcttattaaataaaattgaaatatgtaAAATAA
TTTTAGCCAGTTATAtac Run BLAST on NCBI protein sequence of TCONS_00064097-protein >TCONS_00064097-protein ID=TCONS_00064097-protein|Name=TCONS_00064097-protein|organism=Clytia hemisphaerica|type=polypeptide|length=863bp
MEVARSFCMNYIIEKFPTIEHFNDIKSDEVTKDILEYMIKYTQEKKFKDK
WTCKEQEFDVLFKYIQQGIESIIKKYYTPELSEYYDKNPNYSKEDPSYKL
TFYEQLKDKLVGVLYPTCFRIIPLLLDPEGVLKGRIKPFGHTLLHQVIIQ
HENQFHQKENFNNEESFKCSCMLIPLLIECGANVNATNYNDHTPLFLAIN
NLQFSAVRVLLHYGKIDNKQIQLATFFLARLSPKNVDVDDFEKCLQLLQT
YGADLKKTDELGNSLLNQYLNAGVINSNVPAKKYLSIVEIIVQNSSNWST
KNKLGFTPLHSCIRSEAHPEKDCILNYLCKQSFLNVNEQDNDLKSPLIHA
VSNECCCILLSNGADINLTDKIGLTSLHYASVESSLTLEMFLTYKETDLN
AKDCYGDIPIVYAAATGNIETLKKLYPCYKVDDTLYQRLRSVANFNEFPN
IVTEIERLKGNDEIGELIPTKKIDLGWDNYQDWLKQQTAAAITKEKAEGT
KQSALEQILNLERIRISENQDIKNEVTELLRRMSNVIRRQDDKLTFIPVL
SGSNAEGTKVGILDEVDFLCHLEILSTDLQLTLEESDFSPAHVRLRTHNH
QSTEYNYLLRKFNKNLYLSAKAVGKQFCNVIAKAITEAEVWDGLHLTWEK
SYQKSIATIILVWNGKNYKCKKISIDIVPTLMITHDVHKSSNLEALSKYI
DLRSALRQTLLVPKQAKDWYNERGDLLWRFSFSNLETKIFQSLPENVRSG
YKIAKFIRDERICPTGANCVISSYILKTCAFHLVLDELTKHGLDSLSKIN
DREWGINILSKLQWFMETKEHVPHFFLEHATLAKYIYRQIVAFCKIGKGW
LDHPWGYTYYTNI Run BLAST on NCBI transcript from alignment at scaffold_407:260328..263645 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00064097 ID=TCONS_00064097|Name=TCONS_00064097|organism=Clytia hemisphaerica|type=transcript|length=3318bp|location=Sequence derived from alignment at scaffold_407:260328..263645 (Clytia hemisphaerica)
gtaTATAACTGGCTAAAATTATTTtacatatttcaattttatttaataag
aaaaaagtttttaagataaATATTATTTCCTCTTTCTATCATTATAGGGC
AAGAAGAGCAAACTATGGAGGTGGCGAGAAGCTTTTGTATGAATTACATA
ATTGAAAAGTTTCCAACaatagaacattttaatgatataaAGTCTGACGA
AGTCACAAAAGATATTTTGGAATACATGATAAAATATACACaggaaaaga
aattcaaagacaAATGGACTTGTAAGGAACAAGAATTTGATGTGCTTTTT
AAGTACATCCAACAAGGCATTGAAAgtattattaaaaaatattatacacC
AGAGCTGTCAGAGTACTATGATAAAAATCCTAACTACAGTAAAGAAGACC
CTTCTTACAAACTAACATTTTATGAACAACTTAAAGATAAGCTTGTAGGG
GTACTTTATCCCACTTGCTTTCGTATCATACCACTGCTTCTTGATCCCGA
AGGGGTGCTGAAGGGAAGAATAAAGCCATTTGGACACACACTATTACATC
AAGTCATTATACAACATGAAAaccaatttcatcaaaaagaaaacttcaac
aATGAAGAAAGCTTTAAGTGCAGCTGTATGCTTATCCCCTTATTGATTGA
GTGTGGAGCAAATGTCAATGCAACGAATTATAATGATCACACTCCTTTGT
TCCTAGCTATCAACAATTTGCAGTTTTCAGCTGTTCGGGTTTTGTTGCAT
TATGGAAAAATAGACAATAAACAAATCCAGTTAGCTACATTTTTTTTAGC
TCGTTTAAGTCCCAAAAATGTTGACGtggatgattttgaaaaatgcttaC
AGTTACTCCAAACTTATGGTgctgatttgaaaaaaactgaTGAACTTGGT
AACTCACTTTTAAACCAATACCTAAATGCAGGGGTAATTAATTCAAATGT
ACCTGCTAAAAAGTATTTATCTATAGTGGAAATAATTGTTCAGAATTCTT
CCAATTGGTCTACAAAAAATAAGCTTGGTTTTACACCATTGCATAGTTGT
ATTAGATCTGAAGCTCATCCAGAAAAAGATTGTATACTAAACTATCTCTG
TAAACAAAGTTTTTTAAATGTCAATGAACAAGACAATGATTTAAAGTCTC
CTTTGATTCATGCAGTTTCGAATGAATGTTGCTGTATACTGTTATCAAAT
GGAGCTGACATAAACTTAACAGATAAAATTGGTTTAACCAGTCTGCATTA
TGCGTCAGTTGAAAGCTCACTTACTCTTGAGATGTTTTTGACATACAAGG
AGACTGACCTAAATGCCAAGGACTGTTACGGTGACATTCCTATAGTTTAT
GCTGCAGCCACAGGGAATATTGAGACTCTGAAAAAGTTATATCCTTGTTA
CAAAGTTGATGATACTTTATACCAACGGTTACGTTCAGTGGCCAATTTCA
ACGAATTTCCTAATATTGTTACAGAGATTGAACGGTTAAAAGGAAATGAT
GAAATAGGAGAATTAATcccaacaaaaaaaattgatttgggtTGGGACAA
CTATCAGGACTGGTTGAAGCAACAGACAGCAGCAGCAATTACGAAAGAGA
AAGCTGAAGGAACCAAACAATCAGCTTTGGaacaaatcttaaatttagAA
AGGATACGTATATCTGAAAATCAAGACATAAAAAATGAAGTGACTGAGCT
GCTAAGACGTATGTCAAATGTGATCAGGAGACAAGATGATAAACTCACAT
TTATACCAGTTCTCTCAGGTAGTAATGCAGAAGGTACCAAAGTTGGAATT
CTTGACGAGGTAGACTTTTTGTGTCATTTAGAGATTTTATCAACTGATTT
ACAATTAACTTTGGAGGAGAGTGATTTTTCACCTGCACATGTGAGACTTA
GGACTCATAACCACCAGTCAACAGAGTATAATTACCTTTTGCGAAAGTTT
AACAAAAATCTCTACCTTTCCGCAAAGGCTGTTGGTAAACAATTCTGTAA
TGTCATCGCTAAAGCAATAACAGAAGCTGAAGTTTGGGATGGCCTTCATT
TGACTTGGGAGAAAAGTTATCAAAAGAGCATAGCTACAATAATTTTGGTT
TGGAATGGAAAGAATTACAAATGTAAAAAGATTTCTATAGACATAGTTCC
AACTTTAATGATTACACATGATGTACACAAGTCTTCCAATTTAGAAGCAT
TGAGCAAATACATTGATTTACGCAGCGCTTTACGCCAAACATTATTGGTT
CCTAAACAGGCAAAGGACTGGTACAATGAAAGAGGAGATCTACTTTGGCG
TTTCTCATTTTCAAACCTGGAAACGAAAATTTTTCAATCGTTACCTGAGA
ATGTAAGGTCTGGGTACAAAATTGCAAAGTTTATCCGCGATGAAAGGATT
TGTCCAACAGGTGCAAATTGTGTTATTTCAAGTTACATTCTTAAGACATG
TGCTTTCCACTTAGTACTTGATGAATTGACGAAACATGGTTTAGATTCAC
TCAGTAAAATCAATGACAGAGAATGGGGAATAAACATATTGAGCAAACTA
CAATGGTTTATGGAAACTAAAGAGCATGTACCACATTTCTTTCTAGAACA
TGCTACATTGGCCAAATATATATACCGTCAGATTGTAGCATTTTGCAAGA
TTGGTAAAGGGTGGCTAGATCATCCTTGGGGATATACATATTACACaaac
atttgatttgaaaatgattttactaAAGAATTATTGATAGCATATTTTTA
ATAGCTTTTGGACCATTTGAAGCAAAAGGTGTTAGGtcagttttttgaag
aattCGTTCAGTtgcaaaatttatcttttttccctGTAAACAGTTGATGA
AGTTTTACATAATAGCGACCATTGGGCCACAATTGTGTACTccaaaagta
aaattgaaagaAGGAGCACAAATACAGGCATAAGCCCTGGCCGTCTAAAA
CGTTTTGAAGCAAAGAGCTGTGAtaattttatatcaatttttacagtttt
attagatatttaaaaagtttgctgtaatatttttcatgttttaaaagtaa
aaaaaaaatggtcTGAGTAAGAATGTCTCAGGTGGAAGATTTTCAAAGAA
GAAATTAGGAGGAAGTCAAAAGGGCTTGGGAATTTCCACAAAATTTCCTT
TGGAAGTTCATCGAAATTCTAttgaatattcaataaaaaaagaatttcga
gacttttatacaaaaaatgaTTAATTAAAACAACTTTAGAAAGTTGGTCC
CAGGGGTTGTTTGATTTTccctgttttctttttaaagaaagcCAGCCATG
AATTACCAATGTTGCAAC Coding sequence (CDS) from alignment at scaffold_407:260328..263645 >TCONS_00064097 ID=TCONS_00064097|Name=TCONS_00064097|organism=Clytia hemisphaerica|type=CDS|length=2592bp|location=Sequence derived from alignment at scaffold_407:260328..263645 (Clytia hemisphaerica)
ATGGAGGTGGCGAGAAGCTTTTGTATGAATTACATAATTGAAAAGTTTCC
AACaatagaacattttaatgatataaAGTCTGACGAAGTCACAAAAGATA
TTTTGGAATACATGATAAAATATACACaggaaaagaaattcaaagacaAA
TGGACTTGTAAGGAACAAGAATTTGATGTGCTTTTTAAGTACATCCAACA
AGGCATTGAAAgtattattaaaaaatattatacacCAGAGCTGTCAGAGT
ACTATGATAAAAATCCTAACTACAGTAAAGAAGACCCTTCTTACAAACTA
ACATTTTATGAACAACTTAAAGATAAGCTTGTAGGGGTACTTTATCCCAC
TTGCTTTCGTATCATACCACTGCTTCTTGATCCCGAAGGGGTGCTGAAGG
GAAGAATAAAGCCATTTGGACACACACTATTACATCAAGTCATTATACAA
CATGAAAaccaatttcatcaaaaagaaaacttcaacaATGAAGAAAGCTT
TAAGTGCAGCTGTATGCTTATCCCCTTATTGATTGAGTGTGGAGCAAATG
TCAATGCAACGAATTATAATGATCACACTCCTTTGTTCCTAGCTATCAAC
AATTTGCAGTTTTCAGCTGTTCGGGTTTTGTTGCATTATGGAAAAATAGA
CAATAAACAAATCCAGTTAGCTACATTTTTTTTAGCTCGTTTAAGTCCCA
AAAATGTTGACGtggatgattttgaaaaatgcttaCAGTTACTCCAAACT
TATGGTgctgatttgaaaaaaactgaTGAACTTGGTAACTCACTTTTAAA
CCAATACCTAAATGCAGGGGTAATTAATTCAAATGTACCTGCTAAAAAGT
ATTTATCTATAGTGGAAATAATTGTTCAGAATTCTTCCAATTGGTCTACA
AAAAATAAGCTTGGTTTTACACCATTGCATAGTTGTATTAGATCTGAAGC
TCATCCAGAAAAAGATTGTATACTAAACTATCTCTGTAAACAAAGTTTTT
TAAATGTCAATGAACAAGACAATGATTTAAAGTCTCCTTTGATTCATGCA
GTTTCGAATGAATGTTGCTGTATACTGTTATCAAATGGAGCTGACATAAA
CTTAACAGATAAAATTGGTTTAACCAGTCTGCATTATGCGTCAGTTGAAA
GCTCACTTACTCTTGAGATGTTTTTGACATACAAGGAGACTGACCTAAAT
GCCAAGGACTGTTACGGTGACATTCCTATAGTTTATGCTGCAGCCACAGG
GAATATTGAGACTCTGAAAAAGTTATATCCTTGTTACAAAGTTGATGATA
CTTTATACCAACGGTTACGTTCAGTGGCCAATTTCAACGAATTTCCTAAT
ATTGTTACAGAGATTGAACGGTTAAAAGGAAATGATGAAATAGGAGAATT
AATcccaacaaaaaaaattgatttgggtTGGGACAACTATCAGGACTGGT
TGAAGCAACAGACAGCAGCAGCAATTACGAAAGAGAAAGCTGAAGGAACC
AAACAATCAGCTTTGGaacaaatcttaaatttagAAAGGATACGTATATC
TGAAAATCAAGACATAAAAAATGAAGTGACTGAGCTGCTAAGACGTATGT
CAAATGTGATCAGGAGACAAGATGATAAACTCACATTTATACCAGTTCTC
TCAGGTAGTAATGCAGAAGGTACCAAAGTTGGAATTCTTGACGAGGTAGA
CTTTTTGTGTCATTTAGAGATTTTATCAACTGATTTACAATTAACTTTGG
AGGAGAGTGATTTTTCACCTGCACATGTGAGACTTAGGACTCATAACCAC
CAGTCAACAGAGTATAATTACCTTTTGCGAAAGTTTAACAAAAATCTCTA
CCTTTCCGCAAAGGCTGTTGGTAAACAATTCTGTAATGTCATCGCTAAAG
CAATAACAGAAGCTGAAGTTTGGGATGGCCTTCATTTGACTTGGGAGAAA
AGTTATCAAAAGAGCATAGCTACAATAATTTTGGTTTGGAATGGAAAGAA
TTACAAATGTAAAAAGATTTCTATAGACATAGTTCCAACTTTAATGATTA
CACATGATGTACACAAGTCTTCCAATTTAGAAGCATTGAGCAAATACATT
GATTTACGCAGCGCTTTACGCCAAACATTATTGGTTCCTAAACAGGCAAA
GGACTGGTACAATGAAAGAGGAGATCTACTTTGGCGTTTCTCATTTTCAA
ACCTGGAAACGAAAATTTTTCAATCGTTACCTGAGAATGTAAGGTCTGGG
TACAAAATTGCAAAGTTTATCCGCGATGAAAGGATTTGTCCAACAGGTGC
AAATTGTGTTATTTCAAGTTACATTCTTAAGACATGTGCTTTCCACTTAG
TACTTGATGAATTGACGAAACATGGTTTAGATTCACTCAGTAAAATCAAT
GACAGAGAATGGGGAATAAACATATTGAGCAAACTACAATGGTTTATGGA
AACTAAAGAGCATGTACCACATTTCTTTCTAGAACATGCTACATTGGCCA
AATATATATACCGTCAGATTGTAGCATTTTGCAAGATTGGTAAAGGGTGG
CTAGATCATCCTTGGGGATATACATATTACACaaacatttga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00064097-exon-scaffold_407-1491911889:260328..263645 | TCONS_00064097-exon-scaffold_407-1491911889:260328..263645 | Clytia hemisphaerica | exon |
| TCONS_00064097-exon-scaffold_407-1510915933:260328..263645 | TCONS_00064097-exon-scaffold_407-1510915933:260328..263645 | Clytia hemisphaerica | exon |
| TCONS_00064097-exon-scaffold_407-1575043694:260328..263645 | TCONS_00064097-exon-scaffold_407-1575043694:260328..263645 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_407 | supercontig | scaffold_407:260328..263645 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
Blast
The following BLAST results are available for this feature:
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