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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00064278 ID=TCONS_00064278|Name=TCONS_00064278|organism=Clytia hemisphaerica|type=transcript|length=1265bp
agcaaaaaatcagaaaaaactaatgatgaaatctcgagaaaatcccaaaa
aaccgctttttccgGGACATTTCCGGACCTGGcgaccggaaaattttttt
ttcgaaaatcgggctccgtcacattttgggtattgccattttacatcatt
gtgcaaaaaattagaaaaaactaatgagctgatcccgagaaaagctggca
acagacgaacgaacggacggacgaacggacaagggttaatttaaaggact
accttaaggtaggtccaaaaaaatttcatccGATATGCTAAAGCTCTGAA
AGACAGGAACATTTTCAATCAATATCTGGAAGGTTAAGAATATTGCAAGA
CTGCCTCAAGAATTTTGTTGCGTCAGGCCTGGACCCCAGCCCTTTTTTTC
CGGGATTGGTGggtccaaccaaaatattttctggCTTATCCGCAAGAGTA
GTTGAACCCAACTGGGATTGCAGCACATCAACAAGGGCCAACAACTATCA
TCCCTCTCCGTTAGGAgagctcctttagagctttagcatgGGCAGCCACC
AATCAGAACATCAGATAAGAATTCTATACGAGTTCTGATTGGTAGTCAGA
CGACCAAGCCTCAGTGCCCAAGTGGAACATTCTATCTCAgtggagatgaa
attttttattgaaatcctCACCTGGGTTtcctcaaaatttaaaaaaatta
atattcttACCTCAGATacaatgttttctaaaatttctgagcctggtgca
actaaaaaagtctggtaTATACAGTTTGAATGACACGGACTGTCGGTAGA
ACCTTGTTGACAGAGTCACAAAACTTTGAGAACCCAGGCAGACttacata
atcaacttaccaaaACCCTCTTTATCAAACTCCAAAAACTCTCAAAACTG
CTAAAAACTACATCAAATCACCAGCAACATTCATAAAAGCTCCAAGCCAT
CAGATATTTTGTTTACAACAATcttgtgttttcatttttttcaattgtta
tcttttttttctgcagaagtcagcattttttataaattatgCGTGTGcat
agaaaagtaaaaaaaaatcctgCAAAAATTTTGAGCAGTGACTGGGTACG
CATTGACCAATCTGATGTGGACAAAATGGAGGTAAACAGAAAATCACTGC
TAGAGCAAGATGGAAAAAGGTTTCATAACACTTTTTTTGTAGCAGGAACA
CACAAATTAATTGCCTATATGGAAAATCACAAATCCAGGTCAAATACCTT
CCTGGAAAGAAAGTG Run BLAST on NCBI transcript from alignment at scaffold_41:632526..633790 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00064278 ID=TCONS_00064278|Name=TCONS_00064278|organism=Clytia hemisphaerica|type=transcript|length=1265bp|location=Sequence derived from alignment at scaffold_41:632526..633790 (Clytia hemisphaerica)
CACTTTCTTTCCAGGAAGGTATTTGACCTGGATTTGTGATTTTCCATATA
GGCAATTAATTTGTGTGTTCCTGCTACAAAAAAAGTGTTATGAAACCTTT
TTCCATCTTGCTCTAGCAGTGATTTTCTGTTTACCTCCATTTTGTCCACA
TCAGATTGGTCAATGCGTACCCAGTCACTGCTCAAAATTTTTGcaggatt
tttttttacttttctatgCACACGcataatttataaaaaatgctgacttc
tgcagaaaaaaaagataacaattgaaaaaaatgaaaacacaagATTGTTG
TAAACAAAATATCTGATGGCTTGGAGCTTTTATGAATGTTGCTGGTGATT
TGATGTAGTTTTTAGCAGTTTTGAGAGTTTTTGGAGTTTGATAAAGAGGG
TtttggtaagttgattatgtaaGTCTGCCTGGGTTCTCAAAGTTTTGTGA
CTCTGTCAACAAGGTTCTACCGACAGTCCGTGTCATTCAAACTGTATAta
ccagacttttttagttgcaccaggctcagaaattttagaaaacattgtAT
CTGAGGTaagaatattaatttttttaaattttgaggaAACCCAGGTGagg
atttcaataaaaaatttcatctccacTGAGATAGAATGTTCCACTTGGGC
ACTGAGGCTTGGTCGTCTGACTACCAATCAGAACTCGTATAGAATTCTTA
TCTGATGTTCTGATTGGTGGCTGCCcatgctaaagctctaaaggagctcT
CCTAACGGAGAGGGATGATAGTTGTTGGCCCTTGTTGATGTGCTGCAATC
CCAGTTGGGTTCAACTACTCTTGCGGATAAGccagaaaatattttggttg
gaccCACCAATCCCGGAAAAAAAGGGCTGGGGTCCAGGCCTGACGCAACA
AAATTCTTGAGGCAGTCTTGCAATATTCTTAACCTTCCAGATATTGATTG
AAAATGTTCCTGTCTTTCAGAGCTTTAGCATATCggatgaaatttttttg
gacctaccttaaggtagtcctttaaattaacccttgtccgttcgtccgtc
cgttcgttcgtctgttgccagcttttctcgggatcagctcattagttttt
tctaattttttgcacaatgatgtaaaatggcaatacccaaaatgtgacgg
agcccgattttcgaaaaaaaaattttccggtcgCCAGGTCCGGAAATGTC
Ccggaaaaagcggttttttgggattttctcgagatttcatcattagtttt
ttctgattttttgct
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00064278-exon-scaffold_41-1491911889:632526..633790 | TCONS_00064278-exon-scaffold_41-1491911889:632526..633790 | Clytia hemisphaerica | exon |
| TCONS_00064278-exon-scaffold_41-1510915933:632526..633790 | TCONS_00064278-exon-scaffold_41-1510915933:632526..633790 | Clytia hemisphaerica | exon |
| TCONS_00064278-exon-scaffold_41-1575043694:632526..633790 | TCONS_00064278-exon-scaffold_41-1575043694:632526..633790 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_41 | supercontig | scaffold_41:632526..633790 . |
Blast
The following BLAST results are available for this feature:
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