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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00064512 ID=TCONS_00064512|Name=TCONS_00064512|organism=Clytia hemisphaerica|type=transcript|length=177bp
gcaaattaaacagcacttaaaattgATTTGAACAATGTTGCATTGGAAga
atacattccaactaaaatAATGGGAAATAAACAAGGAAGATCGAAAGATT
TGGAGGAAGAACTAAAAGTCATTGATGGAAACAACGCGAATTCTTTTGAT
GATAATGGACCAATCAGCTATCAGGTA Run BLAST on NCBI transcript from alignment at scaffold_418:192208..193865- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00064512 ID=TCONS_00064512|Name=TCONS_00064512|organism=Clytia hemisphaerica|type=transcript|length=1658bp|location=Sequence derived from alignment at scaffold_418:192208..193865- (Clytia hemisphaerica)
GCAAATTAAACAGCACTTAAAATTGGTAAAGTTCTGACAATATTTGACTC
TCGATTTTAGAAAATTCATCCCTAAGTTCAGGGGGGCACGCAGTTACTAC
AAGACAGTATGACACTTACTACCGTGGTGGTACTGTATTCAGAAGTTATG
AAAACAGTTACTACACAGTGTAGTAACNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNTCTCAACAGCTGTTAACCAAGTAAAT
TAAAAGAAAATCTAGCACAAAAATGGCTTTAGGTTGAAAAATAATCGCAA
TTTAGGGTAATTTCGAGCAAGTTTTTCCCTGCCTAAGTTCGGTTAAAACT
GTTTGAAAAGAGGGAAAAATGGTAGTTTCTTGTCTTTTTTTTTTCAAACC
GAGGCTGGGCATGTTTTTAAGATGTTCTTAATTTTTCGACGAATTTCAGC
CTGAATGTTCTTATAAACTGGGTTCTATGAAAAAAAACGTGTAGGTGCAG
TACATAAAGTTTGGCCTTTTTTTAATTGTAATTTCTAATCAAATATCTAA
TTCAACCATATATTTTCGCATTTTGGCATTTTTAAAAAGTTTTTGAACCC
TACTTTGAGATGATTCATTTTCATTTTAAATAAATGCTCTAAAAGTGACA
TTCTAGGTTTCAAATTTTTGAGCAATTTCATGATAAATTTTGTTATTAAG
TATATTCTTATAAAAGAAAAAGTGTATAATTCAAAATTGAAAAGTAAAAG
AACTACTGCAGTTACGAAATTTTCTTATGAATGTTAGATAATTTTGAGCA
AATATAGCTATAACCTCTTCAATTTTATTCTGGTCGGCATGTTCTTACGA
TGTTCTTATTTATTTTCCCGAATTTCGGACTAGATGTTCCCATAAACTGT
ATTCTAATTAAAGAAACTTGTATATGATTTAGAGGACTTAACGGGGCCCC
CAGTGGTTCGCGTGAATGCGTGAATTGGAAAGCTTTGTGTGAACAAAAAT
TGCGTGAATTACGAAAAAACATTGCGTGAATGCGTGAATTTGGGGAAAAG
TTTTTCGTGAATTGAAAGTCCGCTGGGGGGGGCCTCCTTAACCTTGATGC
TGTTGAGATCATGCTTTGACTAAAAGTAAAACTTTAGTAAAACTTTGTCA
TTTTAGATTTGAACAATGTTGCATTGGAAGAATACATTCCAACTAAAATA
ATGGGAAATAAACAAGGAAGATCGAAAGATTTGGAGGAAGAACTAAAAGT
CATTGATGGAAACAACGCGAATTCTTTTGATGATAATGGACCAATCAGCT
ATCAGGTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00064512-exon-scaffold_418-1575043694:193841..193865 | TCONS_00064512-exon-scaffold_418-1575043694:193841..193865 | Clytia hemisphaerica | exon |
| TCONS_00064512-exon-scaffold_418-1575043694:192208..192359 | TCONS_00064512-exon-scaffold_418-1575043694:192208..192359 | Clytia hemisphaerica | exon |
| TCONS_00064512-exon-scaffold_418-1510915933:193841..193865 | TCONS_00064512-exon-scaffold_418-1510915933:193841..193865 | Clytia hemisphaerica | exon |
| TCONS_00064512-exon-scaffold_418-1510915933:192208..192359 | TCONS_00064512-exon-scaffold_418-1510915933:192208..192359 | Clytia hemisphaerica | exon |
| TCONS_00064512-exon-scaffold_418-1491911889:193841..193865 | TCONS_00064512-exon-scaffold_418-1491911889:193841..193865 | Clytia hemisphaerica | exon |
| TCONS_00064512-exon-scaffold_418-1491911889:192208..192359 | TCONS_00064512-exon-scaffold_418-1491911889:192208..192359 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_418 | supercontig | scaffold_418:192208..193865 - |
Blast
The following BLAST results are available for this feature:
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