TCONS_00064648 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064648
Unique NameTCONS_00064648
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1962

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064648 ID=TCONS_00064648|Name=TCONS_00064648|organism=Clytia hemisphaerica|type=transcript|length=1962bp
CACTAAACAGACTAACAACTAACCACTAAAACGCTATCAATTTCAATCTC
CAGGATGAATATTCTACCAAAGAAAAGgTGGCATGTTCGTAATCGAGATA
ACAAAGAGCGGGTTCGAGAAGATGAAGAGAACGCACAACTTcaagaaaag
aaagaacaagAAAGAATCGCTCTTGCAGAGCAAGAAGCCAGAATCTCACT
CTTACGGAAGCGTCAAACAGAGGCGGCAAATTTGAAATGCCCTGATGAGC
ATAACAAGCATCTTAATTTATTTGACATCAAAGAAAGTACGGGCAGTGAC
GTTCAAGAGCACAAACAAACAAACGCAGACTACATGAAAGAGAAACAAGC
CGAGAAAGAAAGTGaacacaaaaaaattggattGTTGACATACCTTGGTC
AAACTTctttggatgaaaaaagAGAGAATAGAACACCCTGGTATCTCCAA
AAATCACAAAGAAGCTCGGCAGTCAAAGAAGAACCTACTAAAGCGAAAGA
AGAAACGCACGCGGGTCAAAAGATTCGCATGGACCCGATGAGCGTTGTTG
AACAACATTTCAAACAGAAAGAAAgcaaacacaagaaaaaacataagaaa
cacaaaaaatcacacaaaaaagAAAAATCTTCATCGAGCAAAACAATGGA
ACAGTTAAGAGCTGAACGTTTACAGAGAGAATCCAGCGAACGGAGGCGAG
CGGAACAACTGCTGGATGGCTCCACGGAGGAAACAAATGAGGATGAACGG
TCTCAAGGTGACCAGAAAAGAAGGTACAACAGCCAATACATGCCACAcat
ttcttcatcttcatctaaATCGAGAACAGAGCGTTGGAAACCTTATTGAT
GACAGCGGTGACGAAATGCTCGGTGATTTTGTAGTTAGCTTTAATTGTCG
GTGATGATAGGCTCTCCAAGCGGTCAAACTGGAGCGGATTTTTCAGggat
tttcccatttttttcgagtttggtgcattatgggacatctgacaggacac
attcatgacggctaaattaagcttctccaaaaaagtccaaaaataggTAT
GTTTATGGGGCGGAAgtacatgcagttttgaaaaaaccgaaaatgagcCC
CTTACGACCGTTGAGATGATCCGATGAAAAACTTGTAGAAGGATGGGTAC
AGTAAACAGaaatttttgaatgaatttgATGATAAGCACCACAGTGTATA
ATCGTCGTCAAAAGTTCAGTTCATTATATGTGCATGTACGCCATATGCGT
GTCCAGGATCTGCAATAGCTGTTGAAGAAAGCTATAACCAGAACCATTAA
TATTCCTTGCTGTCATCGAGGGCGCGTTAGATGAAGGTGGTAAGAGATGC
ACATAGTTATTCTTTATCCAGAGATTATTTATGGAATATCTCATATAAAA
CAAACCAATATAATTGAATTGTATGTATGTTGATTGACTTGACAGTTTAA
TATCCACATTCGATATCAAAAAGGGGTCCGCCAGAACCCCTTGTTATTGA
TAGCAGAGCAGAAGATCCATATCTTAAAGGAGAGATGATAAAGGACAAAG
AATGATGATGCTTATGGCGTCTAAATCCATCCAACTGGAAGGAAGACAGG
AGAAACATTAAACCATCCGTTGTTTGTTCTTTACGGAGTGTTGTACGTAA
CTACATTCNTAAATCCATCCAACAGGAAGGAAGACAGGAGAAACATTAAA
CCATCCGTTGTTTGTTCTTTACGGAGTGTTGTACGTAACTACATGCATCC
CCTTAATATTTATAATGGCTTCCTGTTGCTTGTGGTAGGGTTATAAATAA
CCATTTTGTTGTTGGAATATTTTTTCTATCTCTTTCTTATTTTCAGGatg
aaataaattcttttggCTCGATTATCAAACTTCTTTAACGTCACAGATTT
ATTTCGCAATTTTATTTGTCTTTCGCGAAgtgaccgtagtgcagtggtaa
aGCATCCGGCTA
Run BLAST on NCBI

transcript from alignment at scaffold_420:287641..303245+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064648 ID=TCONS_00064648|Name=TCONS_00064648|organism=Clytia hemisphaerica|type=transcript|length=15605bp|location=Sequence derived from alignment at scaffold_420:287641..303245+ (Clytia hemisphaerica)
CACTAAACAGACTAACAACTAACCACTAAAACGCTATCAATTTCAATCTC
CAGGATGAATATTCTACCAAAGAAAAGGTATACTTTTTTAGCTTTTGCCT
TTTTGTCTTTTATACCCCTTTTGCTAGACAGGCAAGATGTCATGTTcaac
tttgaataaaattaaaaggCTGGCAAACGCGATATCATTACAgttgggtt
ggtctaaaaagcagggtagccaattggggtagccaattgggctaggttat
ggggtacctaaatattttacagaccagaatagaaataccgaaaatgaatN
Nggaggcttaaaatcgctaaaaaaagaaaccaatttaagaacaactgttg
tttaatttttaagaactaataaacaaaggtaatatcaccgtctatcaaaa
gatatttatttgattcttataaagcaaatgcttatataagaaaaatgaat
atgcttatattgtgcgccatctcttgtttattttgtaagagttaattacc
gaaaggtatattaccgtctatcaagagttattgatttgattcttataaag
taaatgcttataagaaaaataaataaggtcatattgtgcgccatcccttg
tttactttgtaagaactaattaccgaaaggtatatNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNtttgattcttataaagtatatgcttataagaaaaataaataaggtcat
attgtgcgccataccttgtttactttgtaagaactaattcccgaaaggta
tattaccgtctatgaAGAGTTatggatttgattcttataaagtcttataa
taaaaataaatatgctcatattgtgcgccatactttgtttactttgtaag
aactaattaccgaaaggtatatcaccgtctatcaagagttattgatttga
ttcttataaagtatatgcttataagaaaataaagaaaaaatcaaaactgt
ggagctaaagacacaaagatatatgacgtaatccaaagaaagcCCGGGAA
aagtccgtggttatacgagcgtgtaatttgtaaattaaatttagtgagtt
cgtccaccgtatcaagcactttcgttttctaattttttttccgatgacac
cgccgccgccgcagaaaggctatcgtaaaactttcgctaagcgaaattaa
caaagatataaattaccacgtgttaatgcacgaggagtaagaaatagagc
ttcgttataatagagctatttcaaaagactttttgtacctattacaagct
gccatatttaaaaattttgaaaggaaataattgtttgaaacatctaaaca
tgatttaaattaaacaatagattcaataacaaaggattgtatagatatga
caagattagagatcatatggcccaaaggcgattccaaagctattatcatc
aaattacagcttcacagaaataacaattaaaaacataaataaaatctaaa
tctaaaatattaaaaactgttttgtatatattttttattcgggtcNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTTcacagaaataaca
attaaaaacataaataaaatctaaatctaaaatattaaaaactgttttgt
atatattttttatttgggtctgtaaattttcaaacaaagccaagaaggaa
gacaaaatggcgccaggtctcttgagaagtaacaaagttcagtacctttg
gaaaaaaggatattgtggctgaagttcaaaaggaatcttaaattttatta
catggaatcattaacaagatgttgtaatagtatttccacatgaaaacagg
tttcagatttcaaaagtttaagcaaaaagaggtaccccaaaacctagccc
aattggctaccccattggctaccctgctttttaaaCCAACCCATTACAGT
TCAGGATGCaagacaaattttattttcaatctgcCCGTGACCTAGAAGGG
GGTCAAAAGGTAATTTAAAGTGAATAAAGAGTATGGAAAAACTAGGCTAC
gccatatcttccttcgttttgagagtaaaactcctactcttcgggatacg
agcactgctcttgttttgaatattgaaattcttcgGATAGTATAAATCCC
AGTTTGCAGAGTGTAGCACGTTTGCTCAAGTGTCAAGATCTCGAGTGCAC
AACTTGGAAAAAGTCAAGTgcaggtgcaaaatttgaggtttttaGGTGCA
AGTGAAGTCATTTTTTATAACCCCAAGTGCAGAGTTTTGCTATTTTATTC
TCCTCAGCTCAGGTGCAGagctaattttagcaattttttgcctttttggg
ccaatttccgAGGTATATataggcagttagtcacactacagttagggaaa
ccatccagaatcctgccattctataagccagcaaaaaggTTAGCAAACAA
TACCAGGTTCTTCCTACAGCGAAATCTTGTCAAGAGTAACCCAGAAATGC
GgcttaaatgctttaaaatctTCGTAAGACCAACATTAGAGNNNNNNNNN
NNNNNNNNNNNNNNNNNNNATGCATCAACTGTTTGGGACCCAGCTGGAAA
TGAAACTTTAAAAGCTAAAATTGAAATGGTTCAGAGAAAGAGTTTGCGCT
GGATCTACAGCTCGTGGCATAAGACTGTAAGCCCAACAATGTTAAGAAGA
AAAGCTGACCTTGAAACTCTAGACGAACGTAGATGCAGAGCTCGGGTAAA
AATGCTACACGAAATATATCANNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAT
TTTattaatcatattttttgttacattggcGAGAATAACTTTGTATAAAG
TTTTTGCTaatcaaataatagaaatagaaatagaaatagaaatagaaaaa
aactaaatgacacttttaaaattaagtttcttaggcggcaatcacaaata
tcttcatttcgcgtcctcgttgggtctaaaaagtgagtcggtcggacggt
cggtcggtcgtaaaaattttcgggttttcttacctccatcatccattttt
ggagtgtattcttgaaggaaactgccagccagccagcaNTACCCACAATT
GCGAATATAAACCTTTGTCAAGCTCTAACAAATTCACAACTCACTTCAGT
TTTTCTCAACTTCTCGAGTTTACTTTCCTTCGACTAACTATCAATGCCAG
ATTACACCCTTTCCAATATACTGAGCCACGGAGGTAAAGTTTTTAGATTA
GTGgctaatatttttatctagatCTTTATATGTAcataataaattgattt
ttactATTTATTACTCATTATTTTATTATTNACGTGTTatgggtggtttc
aaattatgacctttgaacactgtgacctccgaccAAAAATGgcacatgta
atgataaacaaagtcaaaatgccgcgaatgcgctagaaatcactcgcaaa
aaatcggcaataataaaatttttgaacgaaggagaGAAAAAGTCCGCCAA
Tattaccgactcaccgactcaattctactcaattttcgagagtcggtcgg
gcgacgcaaaacaaagatatttgtgattggcGCCTTACCATAtttcccat
cgaaaacaaccaaaaacattgctacttcccaaagcgggagaccaaaacaa
attatcttccaagattatggcgcccttttggatctattgttaaggccatc
taaaatggtggaaagagttgcggaaagacagaggcgcccgctgcagcttc
gagggtggtaacgtcaaaacgcccaatatgatcttccaacagaaggcgag
ttagttgccgcatgagttacgtcatgcactccacctcagcgcacaacgaa
cggtgtttcagtgaatatcaataattataagaatatcttatgtgcttaac
ttcAGTAAACCTCGAGTGCTTCAGGTTTTtcgacgcgaaaaaaaatttca
gccaattaaaagcacagagtatgcttatacttactttgtttgctacatcg
tctaggctaaaaaagtgagaaaagacacgaacgccattttttaatgagtg
ctgttataatttttttgattgcgacCGCATAtatacaggaactcgccaaa
tgttcctaactgcactagcgtcccgccaaaatgagtatcaaagattaatg
ctacgaaagcgctatatcgtttacttgactctcaagcaaagaAATGCGCT
GCAAAACGggttattttaaaaagcatgGTACCCCAATAGGTGCACCAATT
GGGGTACTAATTGGGGTATCCATTTAATTTACTGAccaggattttatttt
attttaaaaataaatgtagATTGATATaataataacatattatacAAATA
ATATAATATGCGTTTATAACATAATATTATGCTTGTTTGCTTTAAAACAC
GTGTTTGAGAGAATCAAGGACTACTTCCTAatgtcaattcatatccataT
ATTTCCTGCATCATATTCGGTATAAATGTAATTCTTAATCAAAGTAACCT
TAGAACTATTGTATTTTATGATGTCTTTTTGGTAgtgataaaaatgacaa
atgaAAATGTCATTGCTTTTCTTGCTCTAaaagctattttacaaattttc
caaGTCTAAAATGACTGTTAATTTGTATCCTTTAGTACAATGAGCATCAC
CTTCAGTACAATAAATCTTTTTGGAGGAATTTGACTTACgattattatat
ttcaatattttgtaaatatttttgcaagaaagtgcctttttttgtcaGCA
TTCTGACATGTACAAAGAAGAGATATTAATAAGATGTTACTAGCATTTAG
CAAGCACCTTACAATTCTCCTGAGTTTAAGCTATAATATGATGTTGGTTA
CTGGATTGGAATACTGTTTGGTTTGGTTACTGAATTTATTCTGGTCTTac
ttattctggtctgtaaatttttgaAGTANAGCTATAATATGATGTTGGTT
ACTTGATTGGAATACTGTTTTGTTTGGTTACTGAATTTATTCTGGTCTTA
CTTATTCTGGTATGTAAATTTTTGAAGtaggaaagaaaaaaagcgAGATG
GCGGCTGATTTAATTAAAAAGCATTAGATTTTCACTACCTGTCGGAGAAC
GGCAACTGTGACAAAAGTTTTGTGATAATCTTAAATCTAACTTTATCAAA
CCATCAATGAAAGGTTTTAGCACCATATTATAATGAAATTAAGTGTCATT
TAACAAAATTAAGGGCGGAAAGTGGTACCCCAATAAGTACCCCAATTGGT
GCACCAATTGGGGTACcatgctttttaaaataacccctgcaaaacttcta
aagggattcatgaaaaaataacctggcgctttttaatgaaattaaaattt
ttaaaaactttgagaaattgcctaaaatttgagccatagatgaaaaaatt
tgagccaagccaaccttgaaaactaatttgaaagaagatcaacttcccaa
gaaaaagatctacaggggAGGCAGAGCCCACCTAGATCCGTGCACCGCCG
GATAGTCTATtttccggaaattttgccggacctctaacaatgacccattt
acatgtgcagaattatttttactttagcgtatataaacaaggccttaaaa
atcgaagcgctgtctcgggaattgaatgacaaaatttggttggttgatat
ttggctgctgcacgttcgcaatctgtcattttatctcattttaagttttc
aagttttaattgattgtctcgggatcttgaacttgattcaggtaactctc
atccttgttgttgctgCAAATatatacatcctgtagatgactgatgttgt
tttttctgaaagcttgatttcctagtgtgactaactgatagGTGCACCtt
gttcggcccaaaatttatcaggtgcgCTTTTCCAGTGCGGAACTTGGTAT
TTCTGAATTTTTCCTCCAGTACTGCCTTGCCATCATACTCTGCAACCTGG
GATAAATCACATGCGCActgttttaatgaaacaatagagagtttcgaaac
ctaggCCAATCAGAGCTGTGttttaagcttttttatttgaaatctctatt
gataaacatctttcgtgaaagttgtctattatgtttaaacctattaataa
gcaattctcAGTGAGGGTTACTTTAGGTATACAAAtttttgcgagcagaa
acttttgcaagGACTAAAAATCGTGAAATTCACGACGTctacttttgcaa
atttaacagaaaatttttcgtgagcataaactttcgcgaatcaagacgta
taTAAAactgagaattttcacatgaaaaaatggcttactGTAGAGGGACA
Aatatacttcttggattggcttgaaacatgttgacttattagtcttttag
ctggctaaaagtttgaagttttacagattttctatttcgtCAAGAAtctt
ttgcgagcataaacttttgcgaatggccctttctaacatttttaaagaca
tttactttcgcgaaaagggccaaaattcgcgaaaatcgcaaaagtttctC
CTCAGGAAAGTATATACTAAGTGGGCGTCTacagcagtgcctatagacca
aaaGTAAGggctaaaagcctggatctgtctattttGTAGACTAGGATAAA
CATGTTTATTTCttatttgatttaaatttttgcaGCAACCTTCTCAGGTT
GTCTCACTGAAAAAGAGTCATTTTTCATCTGGAGTAATCAGAGAGGAGTA
AAATGGGATAACTATATGAGCTAGGAGGAACCAAAGGTGttgattttgat
gtttctaatgtGACTGTGAAAGTTTTATCTCTCATTGAGTTTTAATGACA
CTGGCAATTAATAAAGCAAATGCCGTActtaacaataataataatacctA
ACAATCTAAACCCtcccttaacaatcaaaagagccaaaataacaaaaatt
cagATATTGCTGTGGTAAAACCTCTTTGTTGCAATAGGTAATTGTATGGT
ATATATACAatacaaataaaacaaaattgcTCATAACTTTTAAAGTATAT
GATACTACTAGTTATTTTCACATATATTATTTATAAAACACTAGAAAGAG
CTACTCtattcaaaatttcagcccatgcaaacaaaattataaccAGTAAT
AAGGTCTCTATATGGGATATTTTTGCTACAGGTAGAGACAGAGGCCCTAT
CTAGTGTTTCTAGACAGatatcaatttttgatgaattaCTAGTTATACTT
TCAGCAGGTTTTACAGCTTAAAGTTACCTTTTTTTCAGTAATCGTGAAAT
TCCCAATAATTTGTCAGTTAATTATAATCATGTTTccattaatacaataa
tgaccggttggtgagggctgtactgagaaatattgcccgaggtcaagtaa
cgaccgagcttgcgaggttgttgcgttgagcgagggcaatattttcagta
cagaccgaaaaaaccggtcattattgtatttgttaaccgtttccttcagc
ttcaattgatttttagcgctttatccaggaaaaatagcgaaataaagcga
caaaaacaagcgaaaagagataaaaaattgttataatttcggacgtcaga
aataaaaaatgagagaaatgatgtcaacgcattgttcattttcctttgaa
aaagtgacgtcacaatgaattttcctaacgaagGGCAACTCTNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATGAACAATGTGTTG
ACataatttctctcattttttatttctgacgtcagaaattatagcaattt
tttatctcttttcgcttgttttttctgctttattttgctatttttcctgg
ataaagcgctaagaatcaatcaaagttgaaggaaacggttaacaaataca
ataatgaccggtttttttcggtctgtactgaaaatattgccctcggtcaa
cgcaacaacctcgcaagctcggtcgttacttgacctcgggcaatatttct
cagtacagccctcactaaccggtcattattgtattaatgtaggcccgtcg
tcatgcgaaaagaaccaattgcattgcgcaaaaagtcgtgtagcccgctt
cgaaaaagtaaccggttaacaactgaataataatgataataattttAGTG
ATCTCAATCGATGAATTTGTTGTTGGTGACCTATTTAAAGTCCAAGTAAA
GTCCAGGATACATTTTACAATATTATGAATGACTATTTGGCCAGTTTCAA
TATATATCTGTGTAACGgtacaaaattttctttcttcaggTGGCATGTTC
GTAATCGAGATAACAAAGAGCGGGTTCGAGAAGATGAAGAGAACGCACAA
CTTcaagaaaagaaagaacaagAAAGAATCGCTCTTGCAGTAAGTGTACC
TTCTGGCGAACTGAAAATTCACCTGGAATAGTCACCTCGCCTTACCTTTT
AAGTAAAAATAGGGCTTTCACTTAATAAGCACGTTTTCATTTATCCTGAG
TTTTATAGAAAATAACACTATGCTGTCATATATCCCCCAACACTGATGAA
ACTATGGGTGGAAAGCTATTTTTGCAAAATGTAAAATATTATTAAATCTA
GTGAAATGATTATCATTTTAACACGAGTAATTGATTCAGACTTTAGTCGA
TAGAATTTTAAACCTCCACCTAGCCAGGAGACAGATTTTCTTTAGCTCCT
TTATGTTATTTGAATGAGCCCTTTATAAAATATTCCACAACAGCTTGCTT
TAGTCATAAAACAGGTCTCACAAAATATTATTGATACAGTAGTATTCCTT
GTTATTTTTGTATCTTCATATCTTCAGGAGCAAGAAGCCAGAATCTCACT
CTTACGGAAGCGTCAAACAGAGGCGGCAAATTTGAAATGCCCTGATGAGC
ATAACAAGCATCTTAATTTATTTGACATCAAAGAAAGTACGGTAAGAATT
CACgtttattattttcttattttcatgttGGTTAATGACTGTTACTTAAG
TTAATCTTTTCTCTATAGTTTTAATGGGGGCGTTATTCTGCACTACTAAG
GTTATTGAAGGTTTTTAAAAGTTGGATCACAGTTCATTTTTTAGGGTATT
GTTTTATCTCTCTAAATAATTTAGAAACTCGCAGATTaattccagcaaaa
aaaaagaaatttcgcCAATTTGATcatttcgaaaagttttttccCCTTGA
AGAGGATGGACATTGTCACATTTAATTTTAacacaaatttctttttcatt
catgTACGATGCAGGGCAGTGACGTTCAAGAGCACAAACAAACAAACGCA
GACTACATGAAAGAGAAACAAGCCGAGAAAGAAAGTGaacacaaaaaaat
tggattGTTGACATACCTTGGTCAAACTTctttggatgaaaaaagtataa
tAACATAGATTTTACGAAATTTAGGGATAAGAGCTATGTCTAGGTAAGAC
TACTtaaatgggataaactttcgtggggattaaatttcgcggttgggcct
atccgcgaaattcaaaaatttcgcggggacttaatttcgcgggtggcact
attgggtggcaatatttccACGATTTTGTGGCTTTTACtgccaaatcatg
catgttggttgttgaaatacacattattagcgctcctttgatgccagtaa
ccattcaaaaagtatttatctgacattttttgagttttgtatagaaatat
ttcgcggatgaggcccttccaaatttccattgggacttaatttcgcggat
tttcgcggatgacacccaaatccgcgaaatttaatccccgcgaaagttta
tcccattaaagtatgaactttaagAAAACTCCTATCAGCGTTACGCTAAA
TAATTGACAGCATACGCAGTTTTGAATTCTTCGAAGTCTTTCCTTTCTAA
ACAAGTTTTGGAACGATTTATTTGTTTAAAATGAGAGGATTTGGAGGTTA
TCATTGAGTTCTATCGgaggaaaataaaaatacacATGATACTTTCAAAA
GTGGCATCcacatttctttctttttataggAGAGAATAGAACACCCTGGT
ATCTCCAAAAATCACAAAGAAGCTCGGCAGTCAAAGAAGAACCTACTAAG
TATGTCTCTTGTCTACGATTCAGTCATGGGTGCACAGTTGTCAATGTTCC
GTTCGGTTCTTAGATAACCGAGCCGACTGGCTGTGTGCCCTTTGAAATAA
TCGAAGATTATCTAAAACTCCTTGATTAGTGGGCTATTCTCGTAAAATAT
TGACTCCATCTATCTTTGTACCACTgcttaatttcaattttgggtGTTTT
TGACTGATTGGATATGATTTAATCGGAGAATTTGTGTTTTCTTCGAACAT
CTATTTAATCCAATGGCCATTAATGTTTAATTAATAGCCATTAATGGCCT
AGATTGCAAGATAATCTTGACGAGGGACCTTAAGTTGTTTGattcaactt
ttttcttttttgagcttttttggaatttagtattttatttttcgaCTTTA
GAGCGAAAGAAGAAACGCACGCGGGTCAAAAGATTCGCATGGACCCGATG
AGCGTTGTTGAACAACATTTCAAACAGAAAGAAAgcaaacacaagaaaaa
acataagaaacacaaaaaatcacacaaaaaagAAGTAAGTTTCAATTTGT
CTTTGTTCTGATATTAATCCAGAGAATAGTAAAAAAACCCTTAAAGGGAT
GGAGCTAGGACTCCTGAGACACCTTCTTTAAGCATAATCACacaatgaaa
aagaagactTGAACACTTTAAAAAACAGCTTTCGTGGTGCGTTCCACCGT
GTAGATAGAACATCAATAAGAAGTGATGGCCGAGCTATCAAGGCGTTTAA
TACCGCAAACATGTACGTCTCGGAATGAAACCCTGGTCTTTTGAAAGTCT
CATTCAGCTCATTTCGTTGATAGCCCAAAACTCTAGAACGTGGATCCTTT
GAAAACAATACAATAAAGACCATCACTGGGCTATCTACGTCAGCAAAGAA
AAATactgagaatttttttatccacCTTCTCATAGAAATCTTCATCGAGC
AAAACAATGGAACAGTTAAGAGCTGAACGTTTACAGAGAGAATCCAGCGA
ACGGAGGCGAGCGGAACAACTGCTGGATGGCTCCACGGAGGAAACAAATG
AGGATGAACGGTCTCAAGGTGACCAGAAAAGAAGGtatttctaaaattca
aaactcAAAAGATCTCCAAATCCTTAATTTTCTAATTCGCCCGAAATTTC
TCTTTTATAAATATAGGTATTACCGAAAGAACGATTTGGTTTTTTTAGAG
AgtccatttctttgttttcccaTCTGTGGATTTAAAGAAATGGTTCAATA
TACTTCATACCATATATGGAAATTTACgaggcactttcgatttggCAGTT
AAAAAATATATCGAAACGTTTTGAAACGTTATGAAAGATATATTccgtgt
ttttatttttgaagaaaattccaTTCCAAAATTTCCTCATTAAGAATCTT
CTGTAGGCTCTCTAAACACGCTTTGTGAAACTGGCTCTTTGTGAGAACGC
CTCCGCGAATATTTTCTAAACAACAGGCATTTAATTACAAAACTTACACT
TTTAATTGCTTTTTGACTGTCTATTATTTGATGATTATTTAATAATTAGT
AggaaaatattgaagaaaaaatttcccgGTCATAAAATTCGTTAACGGAC
GAATTTTATTTATGCATaagtaattatttcttttacTTAAGGGCtcgctc
tgaccatagtcattAAAAATTTGTTAAGAGTGTTAAGGGATctgaagata
aaacttttgttttgttttgttttgacatttttaacaaaaaactggCTTTA
CTTTACAAAACGAATTACAAAAAAggcgttatgaactttaaaaggacttt
aaccctttaactgtcggcatatgccgacatgagcattttcgatttctttg
ccgatgtcgggatttgccgacatgcgCACTTTCCATTCCTTTGCCACCAA
ATTTAacacttctacaaagattttgtattagatggtttgaaatgaaaaaa
gatgttagttaaaagcttttctatgttgaaaaataactattcaacaatgt
tcaactcaaaattatagtccttggctgatacttcatatattattcagaaa
atgaagtcaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgtcgaaccttcttt
ttttcccgtggcaaataggtcgaacctttttttttcccgcggcaaatagg
tcgaaccttaaaaaaaacgacgggcagttaaagggttaataaaatattat
tattaccctcttttacaaaaaatgctaagtttcaatgggtaattaaaacc
tttttctttcgaaatatttttaaattgtccgtaaagaattgaattatttt
agatttttcggaaagaatttctaaattgatgtatcaaaaattatgactca
tttttgaccaaaaattgggatgaaaaattggtcaaaaagtttGATTAGAA
ATACACCTTATaacgcaaaaatatttttgaaatgtttttctttcgccgaa
aataagctcctcaaagttgaaatactcttctttgcaaatgtcttcatttt
cttcttcatcacaTTTTTTCATCGCGATTTGGCCGAACAGAAAACATAGT
TTTGCTGGTTATATCAGGCAGAAatctatattttgtacatggTAAATATG
AAAGAAATTCACTATGGTTAGAGCCCTAGCAATTGTTCCCACTTTATCTC
AACCTTTTTCAGATTTCAttactttaacttttttaacTACAAATGTAATT
TTACCGATAAGGTATGTTTTGGGGCAGAGAACTAAAACATTCGATATTGT
GTGAAATCAGgttaactttatttttaaaatttctactCTCTCTTCTGTAG
CCTGAAGTCTCTTCTGCATATCGTATTGAAAATTGTGTCACCCAGGCTAA
CtgtctttttagaattttcaccCTCTTCTCTGTATATCGTATTCAGTCAG
TCAATTAAAAAGTTGGGCATTGTGTGACCCAGTCTTTTAAAAATCTCGAT
TGTCTTTTGTTTGCAGGTACAACAGCCAATACATGCCACAcatttcttca
tcttcatctaaATCGAGAACAGAGCGTTGGAAACCTTATTGATGACAGCG
GTGACGAAATGCTCGGTGATTTTGTAGTTAGCTTTAATTGTCGGTGATGA
TAGGCTCTCCAAGCGGTCAAACTGGAGCGGATTTTTCAGggattttccca
tttttttcgagtttggtgcattatgggacatctgacaggacacattcatg
acggctaaattaagcttctccaaaaaagtccaaaaataggTATGTTTATG
GGGCGGAAgtacatgcagttttgaaaaaaccgaaaatgagcCCCTTACGA
CCGTTGAGATGATCCGATGAAAAACTTGTAGAAGGATGGGTACAGTAAAC
AGaaatttttgaatgaatttgATGATAAGCACCACAGTGTATAATCGTCG
TCAAAAGTTCAGTTCATTATATGTGCATGTACGCCATATGCGTGTCCAGG
ATCTGCAATAGCTGTTGAAGAAAGCTATAACCAGAACCATTAATATTCCT
TGCTGTCATCGAGGGCGCGTTAGATGAAGGTGGTAAGAGATGCACATAGT
TATTCTTTATCCAGAGATTATTTATGGAATATCTCATATAAAACAAACCA
ATATAATTGAATTGTATGTATGTTGATTGACTTGACAGTTTAATATCCAC
ATTCGATATCAAAAAGGGGTCCGCCAGAACCCCTTGTTATTGATAGCAGA
GCAGAAGATCCATATCTTAAAGGAGAGATGATAAAGGACAAAGAATGATG
ATGCTTATGGCGTCTAAATCCATCCAACTGGAAGGAAGACAGGAGAAACA
TTAAACCATCCGTTGTTTGTTCTTTACGGAGTGTTGTACGTAACTACATT
CNTAAATCCATCCAACAGGAAGGAAGACAGGAGAAACATTAAACCATCCG
TTGTTTGTTCTTTACGGAGTGTTGTACGTAACTACATGCATCCCCTTAAT
ATTTATAATGGCTTCCTGTTGCTTGTGGTAGGGTTATAAATAACCATTTT
GTTGTTGGAATATTTTTTCTATCTCTTTCTTATTTTCAGGatgaaataaa
ttcttttggCTCGATTATCAAACTTCTTTAACGTCACAGATTTATTTCGC
AATTTTATTTGTCTTTCGCGAAgtgaccgtagtgcagtggtaaaGCATCC
GGCTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040554XLOC_040554Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064648-exon-scaffold_420-1491911889:287641..287717TCONS_00064648-exon-scaffold_420-1491911889:287641..287717Clytia hemisphaericaexon
TCONS_00064648-exon-scaffold_420-1510915933:287641..287717TCONS_00064648-exon-scaffold_420-1510915933:287641..287717Clytia hemisphaericaexon
TCONS_00064648-exon-scaffold_420-1575043694:287641..287717TCONS_00064648-exon-scaffold_420-1575043694:287641..287717Clytia hemisphaericaexon
TCONS_00064648-exon-scaffold_420-1491911889:297130..297229TCONS_00064648-exon-scaffold_420-1491911889:297130..297229Clytia hemisphaericaexon
TCONS_00064648-exon-scaffold_420-1510915933:297130..297229TCONS_00064648-exon-scaffold_420-1510915933:297130..297229Clytia hemisphaericaexon
TCONS_00064648-exon-scaffold_420-1575043694:297130..297229TCONS_00064648-exon-scaffold_420-1575043694:297130..297229Clytia hemisphaericaexon
TCONS_00064648-exon-scaffold_420-1491911889:297668..297781TCONS_00064648-exon-scaffold_420-1491911889:297668..297781Clytia hemisphaericaexon
TCONS_00064648-exon-scaffold_420-1510915933:297668..297781TCONS_00064648-exon-scaffold_420-1510915933:297668..297781Clytia hemisphaericaexon
TCONS_00064648-exon-scaffold_420-1575043694:297668..297781TCONS_00064648-exon-scaffold_420-1575043694:297668..297781Clytia hemisphaericaexon
TCONS_00064648-exon-scaffold_420-1491911889:298105..298234TCONS_00064648-exon-scaffold_420-1491911889:298105..298234Clytia hemisphaericaexon
TCONS_00064648-exon-scaffold_420-1510915933:298105..298234TCONS_00064648-exon-scaffold_420-1510915933:298105..298234Clytia hemisphaericaexon
TCONS_00064648-exon-scaffold_420-1575043694:298105..298234TCONS_00064648-exon-scaffold_420-1575043694:298105..298234Clytia hemisphaericaexon
TCONS_00064648-exon-scaffold_420-1491911889:298870..298939TCONS_00064648-exon-scaffold_420-1491911889:298870..298939Clytia hemisphaericaexon
TCONS_00064648-exon-scaffold_420-1510915933:298870..298939TCONS_00064648-exon-scaffold_420-1510915933:298870..298939Clytia hemisphaericaexon
TCONS_00064648-exon-scaffold_420-1575043694:298870..298939TCONS_00064648-exon-scaffold_420-1575043694:298870..298939Clytia hemisphaericaexon
TCONS_00064648-exon-scaffold_420-1491911889:299342..299474TCONS_00064648-exon-scaffold_420-1491911889:299342..299474Clytia hemisphaericaexon
TCONS_00064648-exon-scaffold_420-1510915933:299342..299474TCONS_00064648-exon-scaffold_420-1510915933:299342..299474Clytia hemisphaericaexon
TCONS_00064648-exon-scaffold_420-1575043694:299342..299474TCONS_00064648-exon-scaffold_420-1575043694:299342..299474Clytia hemisphaericaexon
TCONS_00064648-exon-scaffold_420-1491911889:299876..300024TCONS_00064648-exon-scaffold_420-1491911889:299876..300024Clytia hemisphaericaexon
TCONS_00064648-exon-scaffold_420-1510915933:299876..300024TCONS_00064648-exon-scaffold_420-1510915933:299876..300024Clytia hemisphaericaexon
TCONS_00064648-exon-scaffold_420-1575043694:299876..300024TCONS_00064648-exon-scaffold_420-1575043694:299876..300024Clytia hemisphaericaexon
TCONS_00064648-exon-scaffold_420-1491911889:302057..303245TCONS_00064648-exon-scaffold_420-1491911889:302057..303245Clytia hemisphaericaexon
TCONS_00064648-exon-scaffold_420-1510915933:302057..303245TCONS_00064648-exon-scaffold_420-1510915933:302057..303245Clytia hemisphaericaexon
TCONS_00064648-exon-scaffold_420-1575043694:302057..303245TCONS_00064648-exon-scaffold_420-1575043694:302057..303245Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_420supercontigscaffold_420:287641..303245 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.32643	4.39588	1.94066	1.87495	11.0769	8.38081	7.85237	7.43501	7.94726	4.04135	8.85313	9.07868	3.58227	6.39758	4.6704	3.13806	6.29746	5.71549	1.67203	3.49932	4.72133	3.46164	3.66766	3.43189	4.691	5.98418	1.88969	1.76534	1.55182	1.7787
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00064648 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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