TCONS_00064652 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064652
Unique NameTCONS_00064652
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1161

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064652 ID=TCONS_00064652|Name=TCONS_00064652|organism=Clytia hemisphaerica|type=transcript|length=1161bp
CAGATATAATCGTTGTTGAAGAAGAACCAGAACAACAGCATTCGGTAACA
GATGttgtagaagaagaagaagcagaaGAAGAAGAACATCAGCCTTTGGC
AACAGAAGTGACAAATGATGATGGTGGTAATGCTAACATAGCAAATAATG
CAGATATAATcgtaatcaaagatgaagacgaagaagaagaatTACAGCAG
CCTTCGGCAACATATGATGATCACGAATACGATACATATTCAACTTTTGC
AACAGCAGCCGCGAATGTACTGGATGAGCCAATCGTAGAACAAGAGAATG
AAATTCAAGGTTACGGTCAGGTGGAAAGTCGGTATGACCCATGGAATAAC
CACCACGCAAGACGATTCTTGGTGGTTAAACTttctgaaaaacgaaaaat
gtaCGTGGTGAATCATGTTAAAATGGAAAGCATAGAAGTATATCATAATC
CTGCTGGCATTGACtttgacgTTTCTTTGGATTCTTTCTTTGGACCGAAC
AACGCAATTAATAAGAGGGTATCCCTTTACACCGGGGACATACGGTGTCT
TGAAATCGACGCGATAGTCAATGCAGCGAATGAAAGTCTTTTGGGAGGTG
GAGGAGTTGATGACGCCATACATAAAGCTGCTGGGGAAAGTCTGAAAAAG
GAGTGCGAGTTGTTGGGTGGTTGTAGACCAGGATACGCAAAGATTTCGGG
CGGTAGGTCACCGTTTACCTGCTAAATATGTAATTCACACAGTTGGCCCT
AGAAACAAGGACGGCGAAATTTTGAAATCGTGTTATACTAATGTCTTTTC
TCTTGttagagaaaaaaatataaaaactattGCCTTTCCGTGTATTGTGA
CAGGCGACTTTGGATTTTCTATCGAAGAAGCATGTAACATTGCTTTAAAA
ACAACTCGGGATTGGCTGGAAGGTCACCACGAGGAAGTGGAGAGGATAAT
TTTTTGCGTTTTCGATGAagacacaaaaaaaatttacgcAAAATTAATGA
AACTTTATTTTCCGGCCCCAACGAATCTTACTTTGGATGGATACTTGCCT
GAATGTTGGAATCAACGAAAAAGGACGAGAGTAATGAGTGGAGATTGGGa
ctgatatttttttattttatttatttaattcgTTTACACAAACATTGTTA
GAAATTTTTCC
Run BLAST on NCBI

transcript from alignment at scaffold_420:11861..24146-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064652 ID=TCONS_00064652|Name=TCONS_00064652|organism=Clytia hemisphaerica|type=transcript|length=12286bp|location=Sequence derived from alignment at scaffold_420:11861..24146- (Clytia hemisphaerica)
CAGATATAATCGTTGTTGAAGAAGAACCAGAACAACAGCATTCGGTAACA
GGTAAAATCAGAAAGTCCTTCATATAGAAACCTCTTCGCTTTATTACACG
AACACATATCTCAAGGGTTTTTACCTAAACAAATCAATAGAATGAAAATT
TTGATTTCATTACATTAGCATTCCGTAAGGACAGTTTTGTGGAAAATATT
CGAAATCTTCTTTAGATCCCTAGAAAAAGTATTTAAGGGGATGATTCTTT
TTAAGGATTTTAGAATAAGAATTTGATCTTCTGCTTTTTTTCTCGTTCAT
TTGTTCAGCAGATGTTGTAGAAGAAGAAGAAGCAGAAGAAGAAGAACATC
AGCCTTTGGCAACAGGTACATAAAAAACTCTTTTTTTTGAAAAATTTCAT
TGAAAAGTTCGGCACCATTAAGATGCGTCTTTGGTCCAAATTTGACAAAG
ATTTGACATGTACTTATAGAGTTAGAGCTAATTTACGATTTATGACGTCA
TAATTTGACGACGTCACAATTGACACTTTCTTTAAATGATTAATTTTTAG
GTTAATATTTAATTACGTAACACCGGGTCCTGAAACTTTAAGGTATAGGT
CATCTTTTTGAAGCCGGAACTCTTTGAAAATCGCCGTAACAACCTATTTT
CGCCGGAAAGACAGTATTTCTTGAATTTCTCGAGCTGTACTTAATATTTT
TTATGAAATATTGCATACTGATGCAAAATGACAATACCTAAAATGTCACG
GAGCCCGATCTAAAAAAAAAAAAAATTTTCCGGCCGAAAATGCCGGAAAT
ATGCTGGAAAACTGGTTTTTTGACATTTTCTCGAATTTTCATCCTGTCTG
ATTTTTTTTCAGAAAGATGCGTATTCGCAATGCTCAAAACATGACAGAAT
TCGATTTTTGAGAAAAAAATTTTTCCGGCCAAAAATGCCGGAAATTTCCG
TTTTTGCAGATTTTCATTGGATTTTTTCGTTTTATGTCCTTTTTTTCAAA
CATTATTTATAAGAATGTCCACGATTAAGCATGTTTCAATTTTCAATGAA
ACTGATTTTGGTAAAGGAACTTTCTAAAAATCGCCAGAACAGCCGAGAAG
CCGGATTTCTTGAATTTCTCTATTGTTGTCATTTTTCAATTGTCTTATTA
CATCAATCTTCAGGTAGGTCCATTCAGCATGTAGCTTGTTACATTAGTAT
TCTAAGATACTTTTGAAGATTGCTTTTAAATTGTTTATCACGCATAAAAT
GGCAATGAAACTCATCCAATATAACGCTAATTGAAGTTTTTCTTAAAGAA
AGATTATTTTTGTTGAATCATTTTAGAAGTGACAAATGATGATGGTGGTA
ATGCTAACATAGCAAATAATGGTAAAATTTTCATGTTTGTACTTTTTATT
CTTCCTTAGAATAAGACAATTTTCTCCTCAGATTTATATTCAATTTAGGG
AAATCTTGATCCTGGTGGGAATAATCCAAAAAACGCGAAAGTTTCTGCCC
GCGGTTTTTAAGAATTTTAACAAGGATTTATCTCCCGTTTTCTATTCTCA
TTCATTTGTTCAGCAGATATAATCGTAATCAAAGATGAAGACGAAGAAGA
AGAATTACAGCAGCCTTCGGCAACATGTAAAATCCTTGAGTTCTTTATAT
GAAAACCTCTTCGCTTTATTATTATACAAGCGCTTATCTTTCTTATTAGT
ATTAGCATACTTATCTAAACGAATCAAGATTGAAAATTCTAACCTTTCTT
CTGGATAATTATAAACAGAAGAATATTTTTCTGACATTGTTGATGATACG
CGTACGAACATCTTCCAATGTCTATAGCAATATCTTTCTTCTTTCTCTTG
TAGATGATGATCACGAATACGATACATATTCAACTTTTGCAACAGGTACA
GATCAATATTCAAAAAATGATTTTGATTTGAAGGTGCCATACTTGGCTTA
ATGATTAGCTCGTAGATCTATTGCTTGCTTCTATCTCCCAGCTTTATGTC
ATGTCAGTAACGTGACTTAAGTCAAGTATCTAAAGAGTTTTATAGACAAT
GAGTAAAATGTTTCAAACAATTAAAAACTAATGACAGACTAAATTTTGTG
GAATTCATTATGTATCTGACATGGGAAAGTGTCTATTTAGAACGCTTATG
ACGAGGTATCCAGCGCAGCTAACAAAAGACAAATAGAATTTCTAATATAC
AATTCCCGTCGTCGCAAATGTCGGTTTGGATTATGCATCGGTAGTCGATA
TCCGAAATTCTATCTTTACTTAACTGAAATTCGAATTAGCTTCTTCGTGA
AGTTTGACGGTGATTTCAATTTAATTGAAAACGCGAACTTATTAAGCAGT
AAAACGCCAATAAGTTAGAGAACGTAAACTGTATTATCAGTGTAAATTTT
AATGGAAGAGAACAGTAAAAAATAATGCTCATTTAAGTGTTAATTTTCTC
GCTCAAGCATGAATGAAAAATAAAATCTTAAACTTACAAATAAAACCAGG
ACGTACATACACAGCTTTCTCGAAAGAAAATATTTGTCCACATCTCCATT
AAACACTTGGTGATCGATGTCAATCCTCCAGCGACTTTCAATGAAGTTTG
CATGATTGAAGTACAACTATCAGGAAAAGATTTACTCGCTGTTACATGCA
TTTATCGAAGCCCAACCAGATCTACGTCCTCTAACGAAAATAACAACAAC
CTAAACTTATTAAACAAGTCCATTGCATTAAACAAGAAATATTCGCACAA
ATGTTTGTTAGGTGATTTCAACTTTCCAACAATCAATTGGGAAAACTGGA
CCACCCTACATCTGGAGGATAGCAAAGAAGAGAGATTCTTAAATGCTTTG
AGAGACGCATATCTACATCAACATGTTAATGAACCAACTCGATGTAGAGG
AACTGATGACCCATCCCTCATCGACTTGATCTTAACAGGCGAAGAAAACC
AAATTAGGAATCTCGACTACCTAAGACCACTAGGAAAAAGTGACCATAGT
TCGTTGGCTTTCAATTTCGTTTGCTACGTTTACTCCAAACCTACGCAAAC
AAGGTTTGCAACATCTATGGCCAATTTCAAATTAATGAAGAATTACCCGA
CGTTGAGGGAATGGAAAGAAGGTTTAAAAAATGCATCCGTGAATAAATCA
GTGGAAGATCTTTGGGAATCGTTCAAGAAAGTTGTCATTGATCTCTTTGA
AAGAAGTTGGAAATGATTTTTGGAGGAAAAAAGGTAAAGTTCCAATTAAG
AAGAATCTTCAAGATGAAATCAAGTTAAATAAAACGCTCTATAGAAGGTG
GTTAAGATCTGCACCTCTCGACAGAGATCGTCATCGTGTCAATTACACTA
TTGTAAGAAACAGAGTTAATCGTTTGATGTCAAAGGCCCACAGGAAAAAA
GCATTTGTGATAAATCCAAGGAAAAGCCAAAGATATTTTGGTCTCAGGTA
AGATCTAAACTTAAGTCATAAGCGCAGTCTCACCACTACTTGAAAACCCT
GATGACAAATCATCGATTAAACACGACGATCTCGACAAGGCTAACATCCT
ACAAAAACAGTTTTGCAGCGTCTTTACCAATGAGCCTCCAGGAACGATCC
CCGACCTTCCTACACGAACTNAGCATCTTTACCAATGAGCCTCCAGGAAC
GATTCCCGACCTTCCTACACGAACTGAGAATCAAGTTGAGAACATCATCA
TAACAGAAGATATGATGAGAAAACAGATAAAATTGCTGGACGTGAGTAAA
TCCTTCGGTCCGGATGATATACGTGCCATTTATCGCCCAAAACCTTGCGA
TAAATTATAGACCTGTTAGATTGACTTCAGTAGTCTGTAATGTACAAGAA
AGTACATTATGAAGCATCTAACTGACGAAAAGCTTCGAACCAACCATCAA
TACGGTTTCATTAGTCGCCGCTACAACGTCACACAACTCCTAAATTATTT
GGACAAGTGCTGTGAAAGTATAGCTAACGGAACTGTTGTGGACACTGTAT
ATTTCGGTTTTGCGAAAGCCTTTGATACTGTTCCCTATCGCCGTCTACTT
AAAAAGCTTAAAGGATATGGAGTATCTGGAAACATCTTGAGATGGGTAGA
GTCTTTTCTGACTGACAGAAAACAATTGGTTAAGGTTAACCAAACTCGAT
CTAAGACGGATGATGTTATCAGTGGTATTCCCCAACAAAGTGTTTTGGGA
CCACTTCTCTTTGTTATCTACATGAACGACCTCCCTGACAATGTGCTGTC
TTCGATTCTCCTACTTTAAGGCCAGAAACTTTCGCAGGCAGAAACTTTCG
CGTTTTTCGCGTTTTTGGCCTTCTTTCGCGAAAGTTTCTGCCAGGTAAGA
AATTAAAGTTAATTTCGCGAAAAATGAAATTTTTCTAAAAATCGCGAAAG
TTTTTTCCAAGTTTTAAAAGCCAAGGATTATCGACTAGGATTCGGAATGG
GAGGNATCGCGAAAGTTTTTTCCAAGTTTTAAAAGCCAAGGAGAGTCGAT
ATTATCGACTAGGATTCGGAATGGGAGAAAGAAGTGCAAATAATATATTT
TTCATTTATTAGCATATCATTCTTTCGATTGAAGAAAGAAATGAGATTTG
AAATAGTTTTTTATTCACTTTCCCTAGCTATTCGCGAAAGTTATTGCAAC
TAAAATTAAACATTCACAAAAAACCGCGAAAGTTTCTTCCGTAAATTTTC
TTCAAAAAGTAAAAATCGCGAAACTTAAATCCGCGAAATTTCGCGACTTT
TCGGTCTCGCGAAACTTTCTGCCCGCGAAAGTTTCTGCCCTTTGCTGACG
ACACGAAGATTTTCAAAGAAGTCAACTCGATTGAGGACTCATTGGCTATC
CAAAAAGACATACACAAACTTGAAAAGTGGTCAAATTATTGGCTATTAAG
ATTTCACCCAGATAAGTGCCACGTTCTCACTCTCGGTAAATATTGGAATA
TTGTCCACGCGCACCCTTATTCACTTAGAAGTGAACAACTTGAGCATGTT
TTTGTTGAAAAAGATCTCGGTGTTCTGATAGACTCTGACTTATCCTTTGA
AGAACATATATCAAAACAAGTGAAAAAATCAAATTCCATTCTAGGAGTCA
TCAGAAGAGGTTTCGAAGACCTAAAAACTTAAAACTTTCTTCGCTCTGTA
CACAACCGGCCTCATCTCGAGTATGCCCAATCTGTATGGTCACCAAAACT
ACGTAAGGACATCAACTTAATTGAGGGCGTTCAACGACGTGCCACTAGGA
TGGTCAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNAAAAAAGTCAGTCACGAAAAACGTCGAA
TAAAGTTCTGAATACCACGCGCATAAGCATATATTTTTCAAAATGTCCAG
AGTACAAGGTTTTCTTTACATATCTCAGCCAATTAGAGCTTTACCCGACG
TTTTTTATATAAATCTGCTATTAGGAAATTTGTTTATTAACCGCTCTTAT
TAATTGAGAACGAAAACATTTGATTAGGAACTGATATTTTTTTTTACATC
CTACATCTTATGTTTCAATAGATGAATAACGCATTTCTTATCCTCCTTTC
CTTAATCTCTGTTTTAACAACTGACTTTTTGCTTTTTTATATACAGCAGC
CGCGAATGTACTGGATGAGCCAATCGTAGAACAAGAGAATGAAATTCAAG
GTATTGCCTTTTTCTAAAGGAGTTATTTATTTGAATTCTTATAACTTTCT
TATAACACTTTAAAGGGCCTCTTTATAGGCTGTGCGCTTACATTTCGGAA
GAAGATGGTGGAGTCTTGCAAAAATCTAAAAAAAAGTTTTCTACTATTTA
ATTCTTTAATGTTATTNGCGTAGAGAGCGGGGGGGGGGGGGGGGCTGTGC
GCTTACATTTCGGAAGAAGATGGTGGAGTCTTGCAAAAATCTAAAAAAAA
GTTTTCTACTATTTAATTCTTTAATGTTACTTTAATCGATTCCTGGTTAT
TGAAAAATCTATATTCTATGTTTTGAGATGTCTCTCTTTCATTGAACCTT
TTCTACGTTTTTCTTTTTTCGTTGAATCATTTCTACGTTTTATTGTCCCT
GATTTGATGGGTAAAGCCTTTCATCCAAGATCCTGGATGATTGCAATAGA
TTACTCAGTGCGCGTTGAATAGAATCGGGATTTGCCCTCACTCACATCGT
AATGTTTGTACGCTGTGATACTCGCGGTATAAGTGTGTATATTCTTATTA
TGTGCTACACAACCGATTCTCCTTTACAAGACAAAAAAGTGCATCTTGAA
ATCCGAATCATTTTAACACTGTAATATCCTAATATGGTGCTTCATGTTCT
TCGACATTTTCAGGTTACGGTCAGGTGGAAAGTCGGTGTAAGTGTACCTT
TATATTGTTCACTACCATCCTACCATGATTACAATGAAAGGAATTTCGTT
TATCTCTTTCATCTGAAATCCCAAAACAATGCCGATTCTAAGGACCGACT
TAAGACTTCAAAATTTACACTAAATAAAATTCTCAATTATCATCATTCAT
TTTGGGAAANCCGATTCTAAGGGCCGACTTAAGACACTAAATAAAATTCT
CAACTATCATCATTCATTTTGGGAAAAATCTTCTTGTTTGATTATTTGAC
TTCTGCTTAATTTTTAAGATGACCCATGGAATAACCACCACGCAAGACGA
TTCTTGGTGGTTAAACTTTCTGAAAAACGAAAAATGTACGTGGTGAATCA
TGTTAAAATGGAAAGCATAGAAGTATATCATAATCCTGCTGGCATTGACT
TTGGTAAATTTTTATTTTATAGTGAATCTTTAGATCAGAAAACCTTGTTT
AAATTACCACACAGACTATCAAATGACTGTTATGTTTTATTTTTCAGACG
TTTCTTTGGATTCTTTCTTTGGACCGAACAACGCAATTAATAAGAGGGTA
TCCCTTTACACCGGGGACATACGGTGTCTTGAAATCGACGCGATAGTCAA
TGCAGGTACTTGAATTCAACTACTTAGTGCACGCCATTCTTGACGAATGA
ATGCCAATAGGAAAAAGATTACGAAACACTGAATGGACATTTCTTAACTG
ACCTACTGTTTATTTTCAGTGGCTAAGAGTTGTAAGGATATATTCCCAGG
GATACTAGGTTATAGGGTGGCGCGTACTCTGAGTATCACAAATCGAGCTT
AAATAATTAAAAGACAAGCTTTGATCGAAAACGCAATCAGGATCGCGCTG
ACTGTCATATAACAACAATAAACAATTCATGACGTAGTTTTGATAAAATA
CATCGAAGCAGATTATTTGAGATGAAGAGCTGCATTTTCATATCAATAAT
TTGTGTGGATTATAAAATATAATTTTTGGAATAAGATAAATCTTTGCAAG
GTTCTTTTGTAAAAGGCAAACGCATATTTGCCTCTACGCAGACTTGAGTG
ATCCTTGGAGCTTAAATTGTCTCTACTTCAAAGAAATTTTATTCCGAACT
CTTAAGAGACAAAAACATAATTGTTACAGTTTCATTTGAAAAAAATAAGT
TAACGACAATATTGTTGCGAATGAGATTAAGGCGATGGGGTTTATCTAGA
CCTTTATTCGTTCTCGCGCGTCACATTTCCAAAATTCGGCAGTAAATATT
GCTTTCTATCTGGCGTTTGCGTAAAAACACGCGGGTCACGTCTTATGGAT
GTTGAAGGACTCGGTATTTTTAGCCTTTTGGAAAGTAGATGATAATTTTG
ATAACCCTTAGAAACCCTTGATTTTCGCACATATCTAGTACCAAATTTGC
CTTACGGTGTCGGTGTTATTGATAATCCTAGACTGGAGTCGTTTATAATG
CGTGTAATACTAATAATACCAATACTAATAACAATAATACGGTATTTAGT
TTGTATAAACGACTGGAAGGATCCGGTGTTCCAGCCTTATAGATACAGGG
GCTAGCTACGCAGAAACTTGCGTAGCGAGAAAACAATTTATCAAGCAGNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNAGTTAGTGCACAAAGGTTTCTAGACGACTAAAATTGTTCCA
TTCATTACTTTTTGCTTTATTTCTACTATGTATAAATTAGTCGTCTAGCT
TGCTAGACTATGATAATCCATACTCTATACTCTTTTTTTCCAGCGAATGA
AAGTCTTTTGGGAGGTGGAGGAGGTAAGATGTTTGCCGTTTTAAAGGTTT
ATATTCTTTGATCTTCCTTTTTTAAGGAACTAATCTGAACATAGGTTTAT
ATTTTCTTTTAATTCTCAACTTCAGTTGAGCTAGAATCTGACAATGTCTG
TATGTATGTCTGTATGTCCGTCCGAAAATTTGGGCAGCCTGGAGACTAAA
AAATATTGTTCGATTTGGCTGAAATTTTGCACACTTGCTCCTTGGGTGAA
TATCTGGGGGTGTTTTTTCACTTTTTAAACATTTATATCTGGGGCCTGGG
GACTAGTTTTTTGCCAAAACGAGGCTAAAACTTGGGGCATCCTGGAAACT
TCAAAAATTGTTCGATTTGGCTGAAATTGTTCCTTAGGTGAATTCTTTTT
CGGGTGAGTTTTCTCAGAAGTAAGTTATTTTGAAAGGCTCTGAGGACGAG
GACAATATTCTAAAGACACTATTTTAACGTATATAAAAAATGTAAAATGA
AGATAAAAACAACCCTAGGTATTCACTCAAGGAACAGGTGTACCAAATTT
CAGCCAAAACGGACAAAATTATAATATTTGCTACCTAATACTAAATATTT
GAAATGTTACAATTGGGCTTTCGAATAACAAAATATCTGAAGTTGAGCCT
CGACTATTTCTATTAACCTAAAAGACTTACCAAGCAAAATGTTTTTTTAA
AATGTTTTTTTCTTTTAAGTCATTGATGTATTACTTTTATTTGTGATAAT
TTTGATCTATAATCTTTTGTCTCTTTAGTTGATGACGCCATACATAAAGC
TGCTGGGGAAAGTCTGAAAAAGGAGTGCGAGTTGTTGGGTGGTTGTAGAC
CAGGATACGCAAAGATTTCGGGCGGTATCGATTTTTATTTTAGTTTTTGA
ATCATTGTTCTAAAAAAGAAGTATTTTTTAAATCCTGAAAATGATCCTTT
GATAGATTTATTTATTTACTCACAAACACAACTGTGATCTTCAGATGTAA
TAGTATATTAGTGAAGACATTAGCCTGATATTTTATTACCACTTTTCTTC
TTTTCATAGGTAGGTCACCGTTTACCTGCTAAATGTAAGATAATTTTTCA
TTTGAATTTAGCCATTTTATAAAGATTTTGACAAAGCAAACATAAAACGC
CTATTTTTATCGACTAGACGACAATTCTTACACAGTAATGGTATTTTCTT
GGACAAATCGAAATATCATAAAAAGGCAAGAGAGGTTGTCATAATTTTCG
AATTTAATTTGGTAATTTGGTCTGCAGCCAACTTTTTAAGTTGCTAAATT
TAAGTAAATTCGACGTGATTTATGAAAAGCTTCTTCGATGTTGAATATAA
GGCAATATCAGTATTAAATTGATTTATAACAATTGCGTTCGGTTTGACAT
CGTTGTTCAATTGCATCGTTGTCAATTTTGTGTTCGCGTATGCTTCCATT
AATATGAAAATTACCAATTACCATTGCTCTTTTAGATGTAATTCACACAG
TTGGCCCTAGAAACAAGGACGGCGAAATTTTGAAATCGTGTTATACTAAT
GTCTTTTCTCTTGTTAGAGAAAAAAATATAAAAACTATTGTAAGTCTATA
ATTTTCCCTTTTCGAGAATGATTTGCCTTTGTACAGCTTTTCCGGCCTTT
TCCTCGGATAGGATCTGGAATACTAGGTGCACCAAGCTCTAAATTTACTT
TGTATGATGGTCGAGGCAATTTTGCTTTTCCAAGCTTTTGAGCTAGGCTA
GAAATAGTCTTTGTCTTTTGATCTTCAATTATTTCAAAATCCGTAAGTAG
AAACAGTTGATCAATTTCATGTTTCAGGCCTTTCCGTGTATTGTGACAGG
CGACTTTGGTAAGAAATCTAATTTGTTTCTTTGTACCTTACTTTAAGTGA
CCTTTTTTTGCTCTAAAAACTTTCAAAAAAGATTGGGCTATTCCAGAAAT
AGTTTGTACACTCTATGTTGAAGAGGTGGTCCAGGATGGCCAGGAAAATG
AAAATGGTTCAGGGCAGTCTTGCTTTTCGAGTGTAAAAATCCAGAGTGCT
CAGTAGATTGAGGTGGAAATTCTGGAGTGGTCAAAAAATGAACTCGAAAA
TCTAGAGTATGGTCAATACAATGAGCTCAAAAATCCAGGATGGTCCAAAA
AATGAGAAATAAAAAACCAAGGGGGTTCACGTTTCCAAGACCATCTCAAC
ATTGGGAGTACAAAATCTTTCTGGAATAGCCCAATCTTTACATACTTATG
TACTTTTTCTTTCGAAAATTAAAACAAATGTCTTATTTTTATGTTTCTAG
GATTTTCTATCGAAGAAGCATGTAACATTGCTTTAAAAACAACTCGGGAT
TGGCTGGAAGGTCACCACGAGGAAGTAAGCTATCAAAACTGAAAAATGTT
TCTTGTTTTTCTGAAGAAAAATGAGATATATTTTACTGAGAATCGAATGA
TGAAGAAGTTTTGGCAATATAATTTAATGTTTGTTTTATTTGACGAGAAT
TGCCACGAAAAGCATCTTCTCCTCTTGATTGAAATGTGCTATTTTAATTT
ACTTTTTTCAGGTGGAGAGGATAATTTTTTGCGTTTTCGATGAAGACACA
AAAAAAATTTACGCAAAATTAATGAAACTTTATTTTCCGGCCCCAACGAA
TCTTACTTTGGATGGATACTTGCCTGGTCAGTATATTTTGTATTGTTTGT
GTTTTTGTTTGATGTATCTAAAGATACAGAATATACCAGCTTTTCAAAAA
CGGGTGAAGGCTTGACACTCAAATGATTTGCTCTTAAGGGGTGCGGCAAG
TATGAATGAGGATCTGAAAACTTTGTTCAGTCAAACATTCAAAACCACAT
TGTCTTTTGCTTGAAAGCGAAAGCGATTGGGTTTTATTGTAATGTTCTGA
TGCAATTATTTTACTCAAAATCACAAAACCACATTTTGATATTGATCCAA
ACTTTGGATGAAACCACTAACCTGGGACTATCCTATTTACTAATAAGCCA
TTGTATCGTGAGTAAATTATCAAACAGGCGTGATATCACCTCGATAAAAA
CTGTGAGAGTCACAGTATACGAACAACAAATATTCTATTCAGCACACATT
AAATGAATATAAAAGTAACCATGGCAATCGTCCAGGATCTTGATAAACTT
AGGAAACCCAGTGGTCTCTGAACACAACACGAAGATCATTCTATAATAAG
GAATCATTTAAATTAATGTTAAAGAATTGAAAATTTATTAATGAATGGGT
AACTAATTTTAGGGAACTAATTTTACCGATATTTGTTTAAGCTGAACATG
AAAACAAGTACTCTCCATCTTCGAATAGTCCGTCGCCACAGGTTAACTTT
TAAAACTGTGGTGCTCACGGTAGTATCATGGCCTTCAGAGGAGATACTAT
TCATGGGCGGAGTGCCTTAACTATAGGAAATAATACAATACATTGTTTCA
CTTTAATAAATGAAAATCATTTTTAATCTTAATGTTTTTTTGGTTTTGTC
CTAGATGGTTTTACAGAAAATTCGTACAGTGATATTCTTAGTTTTTGCAA
TGGTTTTCCTTCTTCCACTCTTATAGAATGTTGGAATCAACGAAAAAGGA
CGAGAGTAATGAGTGGAGATTGGGACTGATATTTTTTTATTTTATTTATT
TAATTCGTTTACACAAACATTGTTAGAAATTTTTCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040556XLOC_040556Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064652-exon-scaffold_420-1575043694:24096..24146TCONS_00064652-exon-scaffold_420-1575043694:24096..24146Clytia hemisphaericaexon
TCONS_00064652-exon-scaffold_420-1575043694:23782..23835TCONS_00064652-exon-scaffold_420-1575043694:23782..23835Clytia hemisphaericaexon
TCONS_00064652-exon-scaffold_420-1575043694:22776..22820TCONS_00064652-exon-scaffold_420-1575043694:22776..22820Clytia hemisphaericaexon
TCONS_00064652-exon-scaffold_420-1575043694:22521..22583TCONS_00064652-exon-scaffold_420-1575043694:22521..22583Clytia hemisphaericaexon
TCONS_00064652-exon-scaffold_420-1575043694:22252..22293TCONS_00064652-exon-scaffold_420-1575043694:22252..22293Clytia hemisphaericaexon
TCONS_00064652-exon-scaffold_420-1575043694:18247..18300TCONS_00064652-exon-scaffold_420-1575043694:18247..18300Clytia hemisphaericaexon
TCONS_00064652-exon-scaffold_420-1575043694:17560..17583TCONS_00064652-exon-scaffold_420-1575043694:17560..17583Clytia hemisphaericaexon
TCONS_00064652-exon-scaffold_420-1575043694:17144..17278TCONS_00064652-exon-scaffold_420-1575043694:17144..17278Clytia hemisphaericaexon
TCONS_00064652-exon-scaffold_420-1575043694:16942..17049TCONS_00064652-exon-scaffold_420-1575043694:16942..17049Clytia hemisphaericaexon
TCONS_00064652-exon-scaffold_420-1575043694:15524..15553TCONS_00064652-exon-scaffold_420-1575043694:15524..15553Clytia hemisphaericaexon
TCONS_00064652-exon-scaffold_420-1575043694:14673..14768TCONS_00064652-exon-scaffold_420-1575043694:14673..14768Clytia hemisphaericaexon
TCONS_00064652-exon-scaffold_420-1575043694:14463..14487TCONS_00064652-exon-scaffold_420-1575043694:14463..14487Clytia hemisphaericaexon
TCONS_00064652-exon-scaffold_420-1575043694:13958..14061TCONS_00064652-exon-scaffold_420-1575043694:13958..14061Clytia hemisphaericaexon
TCONS_00064652-exon-scaffold_420-1575043694:13689..13719TCONS_00064652-exon-scaffold_420-1575043694:13689..13719Clytia hemisphaericaexon
TCONS_00064652-exon-scaffold_420-1575043694:13173..13246TCONS_00064652-exon-scaffold_420-1575043694:13173..13246Clytia hemisphaericaexon
TCONS_00064652-exon-scaffold_420-1575043694:12871..12985TCONS_00064652-exon-scaffold_420-1575043694:12871..12985Clytia hemisphaericaexon
TCONS_00064652-exon-scaffold_420-1575043694:11861..11970TCONS_00064652-exon-scaffold_420-1575043694:11861..11970Clytia hemisphaericaexon
TCONS_00064652-exon-scaffold_420-1510915933:24096..24146TCONS_00064652-exon-scaffold_420-1510915933:24096..24146Clytia hemisphaericaexon
TCONS_00064652-exon-scaffold_420-1510915933:23782..23835TCONS_00064652-exon-scaffold_420-1510915933:23782..23835Clytia hemisphaericaexon
TCONS_00064652-exon-scaffold_420-1510915933:22776..22820TCONS_00064652-exon-scaffold_420-1510915933:22776..22820Clytia hemisphaericaexon
TCONS_00064652-exon-scaffold_420-1510915933:22521..22583TCONS_00064652-exon-scaffold_420-1510915933:22521..22583Clytia hemisphaericaexon
TCONS_00064652-exon-scaffold_420-1510915933:22252..22293TCONS_00064652-exon-scaffold_420-1510915933:22252..22293Clytia hemisphaericaexon
TCONS_00064652-exon-scaffold_420-1510915933:18247..18300TCONS_00064652-exon-scaffold_420-1510915933:18247..18300Clytia hemisphaericaexon
TCONS_00064652-exon-scaffold_420-1510915933:17560..17583TCONS_00064652-exon-scaffold_420-1510915933:17560..17583Clytia hemisphaericaexon
TCONS_00064652-exon-scaffold_420-1510915933:17144..17278TCONS_00064652-exon-scaffold_420-1510915933:17144..17278Clytia hemisphaericaexon
TCONS_00064652-exon-scaffold_420-1510915933:16942..17049TCONS_00064652-exon-scaffold_420-1510915933:16942..17049Clytia hemisphaericaexon
TCONS_00064652-exon-scaffold_420-1510915933:15524..15553TCONS_00064652-exon-scaffold_420-1510915933:15524..15553Clytia hemisphaericaexon
TCONS_00064652-exon-scaffold_420-1510915933:14673..14768TCONS_00064652-exon-scaffold_420-1510915933:14673..14768Clytia hemisphaericaexon
TCONS_00064652-exon-scaffold_420-1510915933:14463..14487TCONS_00064652-exon-scaffold_420-1510915933:14463..14487Clytia hemisphaericaexon
TCONS_00064652-exon-scaffold_420-1510915933:13958..14061TCONS_00064652-exon-scaffold_420-1510915933:13958..14061Clytia hemisphaericaexon
TCONS_00064652-exon-scaffold_420-1510915933:13689..13719TCONS_00064652-exon-scaffold_420-1510915933:13689..13719Clytia hemisphaericaexon
TCONS_00064652-exon-scaffold_420-1510915933:13173..13246TCONS_00064652-exon-scaffold_420-1510915933:13173..13246Clytia hemisphaericaexon
TCONS_00064652-exon-scaffold_420-1510915933:12871..12985TCONS_00064652-exon-scaffold_420-1510915933:12871..12985Clytia hemisphaericaexon
TCONS_00064652-exon-scaffold_420-1510915933:11861..11970TCONS_00064652-exon-scaffold_420-1510915933:11861..11970Clytia hemisphaericaexon
TCONS_00064652-exon-scaffold_420-1491911889:24096..24146TCONS_00064652-exon-scaffold_420-1491911889:24096..24146Clytia hemisphaericaexon
TCONS_00064652-exon-scaffold_420-1491911889:23782..23835TCONS_00064652-exon-scaffold_420-1491911889:23782..23835Clytia hemisphaericaexon
TCONS_00064652-exon-scaffold_420-1491911889:22776..22820TCONS_00064652-exon-scaffold_420-1491911889:22776..22820Clytia hemisphaericaexon
TCONS_00064652-exon-scaffold_420-1491911889:22521..22583TCONS_00064652-exon-scaffold_420-1491911889:22521..22583Clytia hemisphaericaexon
TCONS_00064652-exon-scaffold_420-1491911889:22252..22293TCONS_00064652-exon-scaffold_420-1491911889:22252..22293Clytia hemisphaericaexon
TCONS_00064652-exon-scaffold_420-1491911889:18247..18300TCONS_00064652-exon-scaffold_420-1491911889:18247..18300Clytia hemisphaericaexon
TCONS_00064652-exon-scaffold_420-1491911889:17560..17583TCONS_00064652-exon-scaffold_420-1491911889:17560..17583Clytia hemisphaericaexon
TCONS_00064652-exon-scaffold_420-1491911889:17144..17278TCONS_00064652-exon-scaffold_420-1491911889:17144..17278Clytia hemisphaericaexon
TCONS_00064652-exon-scaffold_420-1491911889:16942..17049TCONS_00064652-exon-scaffold_420-1491911889:16942..17049Clytia hemisphaericaexon
TCONS_00064652-exon-scaffold_420-1491911889:15524..15553TCONS_00064652-exon-scaffold_420-1491911889:15524..15553Clytia hemisphaericaexon
TCONS_00064652-exon-scaffold_420-1491911889:14673..14768TCONS_00064652-exon-scaffold_420-1491911889:14673..14768Clytia hemisphaericaexon
TCONS_00064652-exon-scaffold_420-1491911889:14463..14487TCONS_00064652-exon-scaffold_420-1491911889:14463..14487Clytia hemisphaericaexon
TCONS_00064652-exon-scaffold_420-1491911889:13958..14061TCONS_00064652-exon-scaffold_420-1491911889:13958..14061Clytia hemisphaericaexon
TCONS_00064652-exon-scaffold_420-1491911889:13689..13719TCONS_00064652-exon-scaffold_420-1491911889:13689..13719Clytia hemisphaericaexon
TCONS_00064652-exon-scaffold_420-1491911889:13173..13246TCONS_00064652-exon-scaffold_420-1491911889:13173..13246Clytia hemisphaericaexon
TCONS_00064652-exon-scaffold_420-1491911889:12871..12985TCONS_00064652-exon-scaffold_420-1491911889:12871..12985Clytia hemisphaericaexon
TCONS_00064652-exon-scaffold_420-1491911889:11861..11970TCONS_00064652-exon-scaffold_420-1491911889:11861..11970Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_420supercontigscaffold_420:11861..24146 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0752998	0	0.000165933	5.36315e-08	0	0	0.409018	0	0	0	0.144596	0.0688296	0	0.715399	0	0	0	0	0.0066099	0	0	0	0.0676769	0.0216516	0	0	0.000378782	0	3.28282e-05	0
Blast
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BLAST of TCONS_00064652 vs. Swiss-Prot (Human)
Match: MACD2 (O-acetyl-ADP-ribose deacetylase MACROD2 OS=Homo sapiens GN=MACROD2 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.331e-46
Identity = 56/108 (51.85%), Postives = 69/108 (63.89%), Query Frame = 1 
Query:  706 GHRLPAKYVIHTVGP------RNKDGEILKSCYTNVFSLVREKNIKTIAFPCIVTGDFGFSIEEACNIALKTTRDWLEGHHEEVERIIFCVFDEDTKKIYAKLMKLYF 1011
            G+ LPAKYVIHTVGP           E L +CY +   LV+E NI+++AFPCI TG +GF  E A  IAL T ++WL  +H EV+RIIFCVF E   KIY K M  +F
Sbjct:  133 GYDLPAKYVIHTVGPIARGHINGSHKEDLANCYKSSLKLVKENNIRSVAFPCISTGIYGFPNEPAAVIALNTIKEWLAKNHHEVDRIIFCVFLEVDFKIYKKKMNEFF 240

HSP 2 Score: 96.2857 bits (238), Expect = 2.331e-46
Identity = 52/117 (44.44%), Postives = 71/117 (60.68%), Query Frame = 3 
Query:  363 RFLVVKLSEKRKMYVVNHVKMESIEVYHNP---AGIDFDVSLDSFFGPNNAINKRVSLYTGDIRCLEIDAIVNAANESLLGGGGVDDAIHKAAGESLKKECELLGGCRPGYAKISGG 704
            R L + L E+RK Y+ +++ + SI  +       G + + +         ++ ++VSLY GDI  LE+DAIVNAAN SLLGGGGVD  IH+AAG  L  EC  L GC  G+AKI+ G
Sbjct:   17 RLLKMTLEERRKEYLRDYIPLNSILSWKEEMKGKGQNDEENTQETSQVKKSLTEKVSLYRGDITLLEVDAIVNAANASLLGGGGVDGCIHRAAGPCLLAECRNLNGCDTGHAKITCG 133
The following BLAST results are available for this feature:
BLAST of TCONS_00064652 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MACD22.331e-4651.85O-acetyl-ADP-ribose deacetylase MACROD2 OS=Homo sa... [more]
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