TCONS_00064662 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064662
Unique NameTCONS_00064662
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1826

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064662 ID=TCONS_00064662|Name=TCONS_00064662|organism=Clytia hemisphaerica|type=transcript|length=1826bp
tagGAGCGGTATATGATCAATTTTGGGAGAATATATTCAGTAATGCTACC
ATGACAAATAACGATATAATCGTTGTTGAAGAAGAACCAGAACAACAGCA
TTCGGTAACAGATGttgtagaagaagaagaagcagaaGAAGAAGAACATC
AGCCTTTGGCAACAGAAGTGACAAATGATGATGGTGGTAATGCTAACATA
GCAAATAATGATATAATcgtaatcaaagatgaagacgaagaagaagaatT
ACAGCAGCCTTCGGCAACATATGATGATCACGAATACGATACATATTCAA
CTTTTGCAACAGCAGCCGCGAATGTACTGGATGAGCCAATCGTAGAACAA
GAGAATGAAATTCAAGGTTACGGTCAGGTGGAAAGTCGGTATGACCCATG
GAATAACCACCACGCAAGACGATTCTTGGTGGTTAAACTttctgaaaaac
gaaaaatgtaCGTGGTGAATCATGTTAAAATGGAAAGCATAGAAGTATAT
CATAATCCTGCTGGCATTGACtttgacgTTTCTTTGGATTCTTTCTTTGG
ACCGAACAACGCAATTAATAAGAGGGTATCCCTTTACACCGGGGACATAC
GGTGTCTTGAAATCGACGCGATAGTCAATGCAGCGAATGAAAGTCTTTTG
GGAGGTGGAGGAGTTGATGACGCCATACATAAAGCTGCTGGGGAAAGTCT
GAAAAAGGAGTGCGAGTTGTTGGGTGGTTGTAGACCAGGATACGCAAAGA
TTTCGGGCGGTAGGTCACCGTTTACCTGCTAAATATGTAATTCACACAGT
TGGCCCTAGAAACAAGGACGGCGAAATTTTGAAATCGTGTTATACTAATG
TCTTTTCTCTTGttagagaaaaaaatataaaaactattGCCTTTCCGTGT
ATTGTGACAGGCGACTTTGGATTTTCTATCGAAGAAGCATGTAACATTGC
TTTAAAAACAACTCGGGATTGGCTGGAAGGTCACCACGAGGAAGTGGAGA
GGATAATTTTTTGCGTTTTCGATGAagacacaaaaaaaatttacgcAAAA
TTAATGAAACTTTATTTTCCGGCCCCAACGAATCTTACTTTGGATGGATA
CTTGCCTGGTCAGTATATTTTGTATTGTTTGTGTTTTTGTTTGATGTATC
TAAAGATACAGAATATACCAGCTTTTCAAAAACGGGTGAAGGCTTGACAC
TCAAATGATTTGCTCTTAAGGGGTGCGGCAAGTATGAATGAGGATCTGAA
AACTTTGTTCAGTCAAACATTCAAAACCACATTGTCTTTTGCTTGAAAGC
GAAAGCGATTGGGTTTTATTGTAATGTTCTGATGCAATTATTTTACTCAA
AATCACAAAACCACATTTTGATATTGATCCAAACTTTGGATGAAACCACT
AACCTGGGACTATCCTATTTACTAATAAGCCATTGTATCGTGAGTAAATT
ATCAAACAGGCGTGATATCACCTCGATAAAAACTGTGAGAGTCACAGTAT
ACGAACAACAAATATTCTATTCAGCACAcattaaatgaatataaaagtAA
CCATGGCAATCGTCCAGGATCTTGATAAACTTAGGAAACCCAGTGGTCTC
TGAACACAACACGAAGATCATTCTATAATAAGGAATCATTTAAATTAATG
ttaaagaattgaaaatttattaatGAATGGGTAACTAATTTTAGGGAACT
AATTTTACCGATATTTGTTTAAGCTGAACATGAAAACAAGTACTCTCCAT
CTTCGAATAGTCCGTCGCCACAGGTTAACTTTTAAAACTGTGGTGCTCAC
GGTAGTATCATGGCCTTCAGAGGAGA
Run BLAST on NCBI

transcript from alignment at scaffold_420:12153..24515-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064662 ID=TCONS_00064662|Name=TCONS_00064662|organism=Clytia hemisphaerica|type=transcript|length=12363bp|location=Sequence derived from alignment at scaffold_420:12153..24515- (Clytia hemisphaerica)
TAGGAGCGGTATATGATCAATTTTGGGAGAATATATTCAGTAATGCTACC
ATGACAAATAACGGTATGGTTTATACTACTAAACAAAAGGAAAAGTCAAA
ATGATCTCTTTAAAAAGGAGCTCTTAATTTCAAAACTTCTTCAAAGGGTA
CGACCGCACGAACAAAGAACCCTGAGATTGATCATATTAATTTTGGCATA
AAAATTCCGTGCTCTTCTTCTTGATATACCTAAGCAAAAATTACGTTTTT
CCTCCTATCGAAGCATCCGAAATTCTCATTAAAATAGAAAAAAATATAAT
GGTCCAAATTCAGGGTTTTTAAGAATTTTAACAAGGATTTATCTCCCGTT
TTCCCATTTGTTTGTTCAGCAGATATAATCGTTGTTGAAGAAGAACCAGA
ACAACAGCATTCGGTAACAGGTAAAATCAGAAAGTCCTTCATATAGAAAC
CTCTTCGCTTTATTACACGAACACATATCTCAAGGGTTTTTACCTAAACA
AATCAATAGAATGAAAATTTTGATTTCATTACATTAGCATTCCGTAAGGA
CAGTTTTGTGGAAAATATTCGAAATCTTCTTTAGATCCCTAGAAAAAGTA
TTTAAGGGGATGATTCTTTTTAAGGATTTTAGAATAAGAATTTGATCTTC
TGCTTTTTTTCTCGTTCATTTGTTCAGCAGATGTTGTAGAAGAAGAAGAA
GCAGAAGAAGAAGAACATCAGCCTTTGGCAACAGGTACATAAAAAACTCT
TTTTTTTGAAAAATTTCATTGAAAAGTTCGGCACCATTAAGATGCGTCTT
TGGTCCAAATTTGACAAAGATTTGACATGTACTTATAGAGTTAGAGCTAA
TTTACGATTTATGACGTCATAATTTGACGACGTCACAATTGACACTTTCT
TTAAATGATTAATTTTTAGGTTAATATTTAATTACGTAACACCGGGTCCT
GAAACTTTAAGGTATAGGTCATCTTTTTGAAGCCGGAACTCTTTGAAAAT
CGCCGTAACAACCTATTTTCGCCGGAAAGACAGTATTTCTTGAATTTCTC
GAGCTGTACTTAATATTTTTTATGAAATATTGCATACTGATGCAAAATGA
CAATACCTAAAATGTCACGGAGCCCGATCTAAAAAAAAAAAAAATTTTCC
GGCCGAAAATGCCGGAAATATGCTGGAAAACTGGTTTTTTGACATTTTCT
CGAATTTTCATCCTGTCTGATTTTTTTTCAGAAAGATGCGTATTCGCAAT
GCTCAAAACATGACAGAATTCGATTTTTGAGAAAAAAATTTTTCCGGCCA
AAAATGCCGGAAATTTCCGTTTTTGCAGATTTTCATTGGATTTTTTCGTT
TTATGTCCTTTTTTTCAAACATTATTTATAAGAATGTCCACGATTAAGCA
TGTTTCAATTTTCAATGAAACTGATTTTGGTAAAGGAACTTTCTAAAAAT
CGCCAGAACAGCCGAGAAGCCGGATTTCTTGAATTTCTCTATTGTTGTCA
TTTTTCAATTGTCTTATTACATCAATCTTCAGGTAGGTCCATTCAGCATG
TAGCTTGTTACATTAGTATTCTAAGATACTTTTGAAGATTGCTTTTAAAT
TGTTTATCACGCATAAAATGGCAATGAAACTCATCCAATATAACGCTAAT
TGAAGTTTTTCTTAAAGAAAGATTATTTTTGTTGAATCATTTTAGAAGTG
ACAAATGATGATGGTGGTAATGCTAACATAGCAAATAATGGTAAAATTTT
CATGTTTGTACTTTTTATTCTTCCTTAGAATAAGACAATTTTCTCCTCAG
ATTTATATTCAATTTAGGGAAATCTTGATCCTGGTGGGAATAATCCAAAA
AACGCGAAAGTTTCTGCCCGCGGTTTTTAAGAATTTTAACAAGGATTTAT
CTCCCGTTTTCTATTCTCATTCATTTGTTCAGCAGATATAATCGTAATCA
AAGATGAAGACGAAGAAGAAGAATTACAGCAGCCTTCGGCAACATGTAAA
ATCCTTGAGTTCTTTATATGAAAACCTCTTCGCTTTATTATTATACAAGC
GCTTATCTTTCTTATTAGTATTAGCATACTTATCTAAACGAATCAAGATT
GAAAATTCTAACCTTTCTTCTGGATAATTATAAACAGAAGAATATTTTTC
TGACATTGTTGATGATACGCGTACGAACATCTTCCAATGTCTATAGCAAT
ATCTTTCTTCTTTCTCTTGTAGATGATGATCACGAATACGATACATATTC
AACTTTTGCAACAGGTACAGATCAATATTCAAAAAATGATTTTGATTTGA
AGGTGCCATACTTGGCTTAATGATTAGCTCGTAGATCTATTGCTTGCTTC
TATCTCCCAGCTTTATGTCATGTCAGTAACGTGACTTAAGTCAAGTATCT
AAAGAGTTTTATAGACAATGAGTAAAATGTTTCAAACAATTAAAAACTAA
TGACAGACTAAATTTTGTGGAATTCATTATGTATCTGACATGGGAAAGTG
TCTATTTAGAACGCTTATGACGAGGTATCCAGCGCAGCTAACAAAAGACA
AATAGAATTTCTAATATACAATTCCCGTCGTCGCAAATGTCGGTTTGGAT
TATGCATCGGTAGTCGATATCCGAAATTCTATCTTTACTTAACTGAAATT
CGAATTAGCTTCTTCGTGAAGTTTGACGGTGATTTCAATTTAATTGAAAA
CGCGAACTTATTAAGCAGTAAAACGCCAATAAGTTAGAGAACGTAAACTG
TATTATCAGTGTAAATTTTAATGGAAGAGAACAGTAAAAAATAATGCTCA
TTTAAGTGTTAATTTTCTCGCTCAAGCATGAATGAAAAATAAAATCTTAA
ACTTACAAATAAAACCAGGACGTACATACACAGCTTTCTCGAAAGAAAAT
ATTTGTCCACATCTCCATTAAACACTTGGTGATCGATGTCAATCCTCCAG
CGACTTTCAATGAAGTTTGCATGATTGAAGTACAACTATCAGGAAAAGAT
TTACTCGCTGTTACATGCATTTATCGAAGCCCAACCAGATCTACGTCCTC
TAACGAAAATAACAACAACCTAAACTTATTAAACAAGTCCATTGCATTAA
ACAAGAAATATTCGCACAAATGTTTGTTAGGTGATTTCAACTTTCCAACA
ATCAATTGGGAAAACTGGACCACCCTACATCTGGAGGATAGCAAAGAAGA
GAGATTCTTAAATGCTTTGAGAGACGCATATCTACATCAACATGTTAATG
AACCAACTCGATGTAGAGGAACTGATGACCCATCCCTCATCGACTTGATC
TTAACAGGCGAAGAAAACCAAATTAGGAATCTCGACTACCTAAGACCACT
AGGAAAAAGTGACCATAGTTCGTTGGCTTTCAATTTCGTTTGCTACGTTT
ACTCCAAACCTACGCAAACAAGGTTTGCAACATCTATGGCCAATTTCAAA
TTAATGAAGAATTACCCGACGTTGAGGGAATGGAAAGAAGGTTTAAAAAA
TGCATCCGTGAATAAATCAGTGGAAGATCTTTGGGAATCGTTCAAGAAAG
TTGTCATTGATCTCTTTGAAAGAAGTTGGAAATGATTTTTGGAGGAAAAA
AGGTAAAGTTCCAATTAAGAAGAATCTTCAAGATGAAATCAAGTTAAATA
AAACGCTCTATAGAAGGTGGTTAAGATCTGCACCTCTCGACAGAGATCGT
CATCGTGTCAATTACACTATTGTAAGAAACAGAGTTAATCGTTTGATGTC
AAAGGCCCACAGGAAAAAAGCATTTGTGATAAATCCAAGGAAAAGCCAAA
GATATTTTGGTCTCAGGTAAGATCTAAACTTAAGTCATAAGCGCAGTCTC
ACCACTACTTGAAAACCCTGATGACAAATCATCGATTAAACACGACGATC
TCGACAAGGCTAACATCCTACAAAAACAGTTTTGCAGCGTCTTTACCAAT
GAGCCTCCAGGAACGATCCCCGACCTTCCTACACGAACTNAGCATCTTTA
CCAATGAGCCTCCAGGAACGATTCCCGACCTTCCTACACGAACTGAGAAT
CAAGTTGAGAACATCATCATAACAGAAGATATGATGAGAAAACAGATAAA
ATTGCTGGACGTGAGTAAATCCTTCGGTCCGGATGATATACGTGCCATTT
ATCGCCCAAAACCTTGCGATAAATTATAGACCTGTTAGATTGACTTCAGT
AGTCTGTAATGTACAAGAAAGTACATTATGAAGCATCTAACTGACGAAAA
GCTTCGAACCAACCATCAATACGGTTTCATTAGTCGCCGCTACAACGTCA
CACAACTCCTAAATTATTTGGACAAGTGCTGTGAAAGTATAGCTAACGGA
ACTGTTGTGGACACTGTATATTTCGGTTTTGCGAAAGCCTTTGATACTGT
TCCCTATCGCCGTCTACTTAAAAAGCTTAAAGGATATGGAGTATCTGGAA
ACATCTTGAGATGGGTAGAGTCTTTTCTGACTGACAGAAAACAATTGGTT
AAGGTTAACCAAACTCGATCTAAGACGGATGATGTTATCAGTGGTATTCC
CCAACAAAGTGTTTTGGGACCACTTCTCTTTGTTATCTACATGAACGACC
TCCCTGACAATGTGCTGTCTTCGATTCTCCTACTTTAAGGCCAGAAACTT
TCGCAGGCAGAAACTTTCGCGTTTTTCGCGTTTTTGGCCTTCTTTCGCGA
AAGTTTCTGCCAGGTAAGAAATTAAAGTTAATTTCGCGAAAAATGAAATT
TTTCTAAAAATCGCGAAAGTTTTTTCCAAGTTTTAAAAGCCAAGGATTAT
CGACTAGGATTCGGAATGGGAGGNATCGCGAAAGTTTTTTCCAAGTTTTA
AAAGCCAAGGAGAGTCGATATTATCGACTAGGATTCGGAATGGGAGAAAG
AAGTGCAAATAATATATTTTTCATTTATTAGCATATCATTCTTTCGATTG
AAGAAAGAAATGAGATTTGAAATAGTTTTTTATTCACTTTCCCTAGCTAT
TCGCGAAAGTTATTGCAACTAAAATTAAACATTCACAAAAAACCGCGAAA
GTTTCTTCCGTAAATTTTCTTCAAAAAGTAAAAATCGCGAAACTTAAATC
CGCGAAATTTCGCGACTTTTCGGTCTCGCGAAACTTTCTGCCCGCGAAAG
TTTCTGCCCTTTGCTGACGACACGAAGATTTTCAAAGAAGTCAACTCGAT
TGAGGACTCATTGGCTATCCAAAAAGACATACACAAACTTGAAAAGTGGT
CAAATTATTGGCTATTAAGATTTCACCCAGATAAGTGCCACGTTCTCACT
CTCGGTAAATATTGGAATATTGTCCACGCGCACCCTTATTCACTTAGAAG
TGAACAACTTGAGCATGTTTTTGTTGAAAAAGATCTCGGTGTTCTGATAG
ACTCTGACTTATCCTTTGAAGAACATATATCAAAACAAGTGAAAAAATCA
AATTCCATTCTAGGAGTCATCAGAAGAGGTTTCGAAGACCTAAAAACTTA
AAACTTTCTTCGCTCTGTACACAACCGGCCTCATCTCGAGTATGCCCAAT
CTGTATGGTCACCAAAACTACGTAAGGACATCAACTTAATTGAGGGCGTT
CAACGACGTGCCACTAGGATGGTCAGANNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAGTC
AGTCACGAAAAACGTCGAATAAAGTTCTGAATACCACGCGCATAAGCATA
TATTTTTCAAAATGTCCAGAGTACAAGGTTTTCTTTACATATCTCAGCCA
ATTAGAGCTTTACCCGACGTTTTTTATATAAATCTGCTATTAGGAAATTT
GTTTATTAACCGCTCTTATTAATTGAGAACGAAAACATTTGATTAGGAAC
TGATATTTTTTTTTACATCCTACATCTTATGTTTCAATAGATGAATAACG
CATTTCTTATCCTCCTTTCCTTAATCTCTGTTTTAACAACTGACTTTTTG
CTTTTTTATATACAGCAGCCGCGAATGTACTGGATGAGCCAATCGTAGAA
CAAGAGAATGAAATTCAAGGTATTGCCTTTTTCTAAAGGAGTTATTTATT
TGAATTCTTATAACTTTCTTATAACACTTTAAAGGGCCTCTTTATAGGCT
GTGCGCTTACATTTCGGAAGAAGATGGTGGAGTCTTGCAAAAATCTAAAA
AAAAGTTTTCTACTATTTAATTCTTTAATGTTATTNGCGTAGAGAGCGGG
GGGGGGGGGGGGGCTGTGCGCTTACATTTCGGAAGAAGATGGTGGAGTCT
TGCAAAAATCTAAAAAAAAGTTTTCTACTATTTAATTCTTTAATGTTACT
TTAATCGATTCCTGGTTATTGAAAAATCTATATTCTATGTTTTGAGATGT
CTCTCTTTCATTGAACCTTTTCTACGTTTTTCTTTTTTCGTTGAATCATT
TCTACGTTTTATTGTCCCTGATTTGATGGGTAAAGCCTTTCATCCAAGAT
CCTGGATGATTGCAATAGATTACTCAGTGCGCGTTGAATAGAATCGGGAT
TTGCCCTCACTCACATCGTAATGTTTGTACGCTGTGATACTCGCGGTATA
AGTGTGTATATTCTTATTATGTGCTACACAACCGATTCTCCTTTACAAGA
CAAAAAAGTGCATCTTGAAATCCGAATCATTTTAACACTGTAATATCCTA
ATATGGTGCTTCATGTTCTTCGACATTTTCAGGTTACGGTCAGGTGGAAA
GTCGGTGTAAGTGTACCTTTATATTGTTCACTACCATCCTACCATGATTA
CAATGAAAGGAATTTCGTTTATCTCTTTCATCTGAAATCCCAAAACAATG
CCGATTCTAAGGACCGACTTAAGACTTCAAAATTTACACTAAATAAAATT
CTCAATTATCATCATTCATTTTGGGAAANCCGATTCTAAGGGCCGACTTA
AGACACTAAATAAAATTCTCAACTATCATCATTCATTTTGGGAAAAATCT
TCTTGTTTGATTATTTGACTTCTGCTTAATTTTTAAGATGACCCATGGAA
TAACCACCACGCAAGACGATTCTTGGTGGTTAAACTTTCTGAAAAACGAA
AAATGTACGTGGTGAATCATGTTAAAATGGAAAGCATAGAAGTATATCAT
AATCCTGCTGGCATTGACTTTGGTAAATTTTTATTTTATAGTGAATCTTT
AGATCAGAAAACCTTGTTTAAATTACCACACAGACTATCAAATGACTGTT
ATGTTTTATTTTTCAGACGTTTCTTTGGATTCTTTCTTTGGACCGAACAA
CGCAATTAATAAGAGGGTATCCCTTTACACCGGGGACATACGGTGTCTTG
AAATCGACGCGATAGTCAATGCAGGTACTTGAATTCAACTACTTAGTGCA
CGCCATTCTTGACGAATGAATGCCAATAGGAAAAAGATTACGAAACACTG
AATGGACATTTCTTAACTGACCTACTGTTTATTTTCAGTGGCTAAGAGTT
GTAAGGATATATTCCCAGGGATACTAGGTTATAGGGTGGCGCGTACTCTG
AGTATCACAAATCGAGCTTAAATAATTAAAAGACAAGCTTTGATCGAAAA
CGCAATCAGGATCGCGCTGACTGTCATATAACAACAATAAACAATTCATG
ACGTAGTTTTGATAAAATACATCGAAGCAGATTATTTGAGATGAAGAGCT
GCATTTTCATATCAATAATTTGTGTGGATTATAAAATATAATTTTTGGAA
TAAGATAAATCTTTGCAAGGTTCTTTTGTAAAAGGCAAACGCATATTTGC
CTCTACGCAGACTTGAGTGATCCTTGGAGCTTAAATTGTCTCTACTTCAA
AGAAATTTTATTCCGAACTCTTAAGAGACAAAAACATAATTGTTACAGTT
TCATTTGAAAAAAATAAGTTAACGACAATATTGTTGCGAATGAGATTAAG
GCGATGGGGTTTATCTAGACCTTTATTCGTTCTCGCGCGTCACATTTCCA
AAATTCGGCAGTAAATATTGCTTTCTATCTGGCGTTTGCGTAAAAACACG
CGGGTCACGTCTTATGGATGTTGAAGGACTCGGTATTTTTAGCCTTTTGG
AAAGTAGATGATAATTTTGATAACCCTTAGAAACCCTTGATTTTCGCACA
TATCTAGTACCAAATTTGCCTTACGGTGTCGGTGTTATTGATAATCCTAG
ACTGGAGTCGTTTATAATGCGTGTAATACTAATAATACCAATACTAATAA
CAATAATACGGTATTTAGTTTGTATAAACGACTGGAAGGATCCGGTGTTC
CAGCCTTATAGATACAGGGGCTAGCTACGCAGAAACTTGCGTAGCGAGAA
AACAATTTATCAAGCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTTAGTGCACAAAGGTTTCTA
GACGACTAAAATTGTTCCATTCATTACTTTTTGCTTTATTTCTACTATGT
ATAAATTAGTCGTCTAGCTTGCTAGACTATGATAATCCATACTCTATACT
CTTTTTTTCCAGCGAATGAAAGTCTTTTGGGAGGTGGAGGAGGTAAGATG
TTTGCCGTTTTAAAGGTTTATATTCTTTGATCTTCCTTTTTTAAGGAACT
AATCTGAACATAGGTTTATATTTTCTTTTAATTCTCAACTTCAGTTGAGC
TAGAATCTGACAATGTCTGTATGTATGTCTGTATGTCCGTCCGAAAATTT
GGGCAGCCTGGAGACTAAAAAATATTGTTCGATTTGGCTGAAATTTTGCA
CACTTGCTCCTTGGGTGAATATCTGGGGGTGTTTTTTCACTTTTTAAACA
TTTATATCTGGGGCCTGGGGACTAGTTTTTTGCCAAAACGAGGCTAAAAC
TTGGGGCATCCTGGAAACTTCAAAAATTGTTCGATTTGGCTGAAATTGTT
CCTTAGGTGAATTCTTTTTCGGGTGAGTTTTCTCAGAAGTAAGTTATTTT
GAAAGGCTCTGAGGACGAGGACAATATTCTAAAGACACTATTTTAACGTA
TATAAAAAATGTAAAATGAAGATAAAAACAACCCTAGGTATTCACTCAAG
GAACAGGTGTACCAAATTTCAGCCAAAACGGACAAAATTATAATATTTGC
TACCTAATACTAAATATTTGAAATGTTACAATTGGGCTTTCGAATAACAA
AATATCTGAAGTTGAGCCTCGACTATTTCTATTAACCTAAAAGACTTACC
AAGCAAAATGTTTTTTTAAAATGTTTTTTTCTTTTAAGTCATTGATGTAT
TACTTTTATTTGTGATAATTTTGATCTATAATCTTTTGTCTCTTTAGTTG
ATGACGCCATACATAAAGCTGCTGGGGAAAGTCTGAAAAAGGAGTGCGAG
TTGTTGGGTGGTTGTAGACCAGGATACGCAAAGATTTCGGGCGGTATCGA
TTTTTATTTTAGTTTTTGAATCATTGTTCTAAAAAAGAAGTATTTTTTAA
ATCCTGAAAATGATCCTTTGATAGATTTATTTATTTACTCACAAACACAA
CTGTGATCTTCAGATGTAATAGTATATTAGTGAAGACATTAGCCTGATAT
TTTATTACCACTTTTCTTCTTTTCATAGGTAGGTCACCGTTTACCTGCTA
AATGTAAGATAATTTTTCATTTGAATTTAGCCATTTTATAAAGATTTTGA
CAAAGCAAACATAAAACGCCTATTTTTATCGACTAGACGACAATTCTTAC
ACAGTAATGGTATTTTCTTGGACAAATCGAAATATCATAAAAAGGCAAGA
GAGGTTGTCATAATTTTCGAATTTAATTTGGTAATTTGGTCTGCAGCCAA
CTTTTTAAGTTGCTAAATTTAAGTAAATTCGACGTGATTTATGAAAAGCT
TCTTCGATGTTGAATATAAGGCAATATCAGTATTAAATTGATTTATAACA
ATTGCGTTCGGTTTGACATCGTTGTTCAATTGCATCGTTGTCAATTTTGT
GTTCGCGTATGCTTCCATTAATATGAAAATTACCAATTACCATTGCTCTT
TTAGATGTAATTCACACAGTTGGCCCTAGAAACAAGGACGGCGAAATTTT
GAAATCGTGTTATACTAATGTCTTTTCTCTTGTTAGAGAAAAAAATATAA
AAACTATTGTAAGTCTATAATTTTCCCTTTTCGAGAATGATTTGCCTTTG
TACAGCTTTTCCGGCCTTTTCCTCGGATAGGATCTGGAATACTAGGTGCA
CCAAGCTCTAAATTTACTTTGTATGATGGTCGAGGCAATTTTGCTTTTCC
AAGCTTTTGAGCTAGGCTAGAAATAGTCTTTGTCTTTTGATCTTCAATTA
TTTCAAAATCCGTAAGTAGAAACAGTTGATCAATTTCATGTTTCAGGCCT
TTCCGTGTATTGTGACAGGCGACTTTGGTAAGAAATCTAATTTGTTTCTT
TGTACCTTACTTTAAGTGACCTTTTTTTGCTCTAAAAACTTTCAAAAAAG
ATTGGGCTATTCCAGAAATAGTTTGTACACTCTATGTTGAAGAGGTGGTC
CAGGATGGCCAGGAAAATGAAAATGGTTCAGGGCAGTCTTGCTTTTCGAG
TGTAAAAATCCAGAGTGCTCAGTAGATTGAGGTGGAAATTCTGGAGTGGT
CAAAAAATGAACTCGAAAATCTAGAGTATGGTCAATACAATGAGCTCAAA
AATCCAGGATGGTCCAAAAAATGAGAAATAAAAAACCAAGGGGGTTCACG
TTTCCAAGACCATCTCAACATTGGGAGTACAAAATCTTTCTGGAATAGCC
CAATCTTTACATACTTATGTACTTTTTCTTTCGAAAATTAAAACAAATGT
CTTATTTTTATGTTTCTAGGATTTTCTATCGAAGAAGCATGTAACATTGC
TTTAAAAACAACTCGGGATTGGCTGGAAGGTCACCACGAGGAAGTAAGCT
ATCAAAACTGAAAAATGTTTCTTGTTTTTCTGAAGAAAAATGAGATATAT
TTTACTGAGAATCGAATGATGAAGAAGTTTTGGCAATATAATTTAATGTT
TGTTTTATTTGACGAGAATTGCCACGAAAAGCATCTTCTCCTCTTGATTG
AAATGTGCTATTTTAATTTACTTTTTTCAGGTGGAGAGGATAATTTTTTG
CGTTTTCGATGAAGACACAAAAAAAATTTACGCAAAATTAATGAAACTTT
ATTTTCCGGCCCCAACGAATCTTACTTTGGATGGATACTTGCCTGGTCAG
TATATTTTGTATTGTTTGTGTTTTTGTTTGATGTATCTAAAGATACAGAA
TATACCAGCTTTTCAAAAACGGGTGAAGGCTTGACACTCAAATGATTTGC
TCTTAAGGGGTGCGGCAAGTATGAATGAGGATCTGAAAACTTTGTTCAGT
CAAACATTCAAAACCACATTGTCTTTTGCTTGAAAGCGAAAGCGATTGGG
TTTTATTGTAATGTTCTGATGCAATTATTTTACTCAAAATCACAAAACCA
CATTTTGATATTGATCCAAACTTTGGATGAAACCACTAACCTGGGACTAT
CCTATTTACTAATAAGCCATTGTATCGTGAGTAAATTATCAAACAGGCGT
GATATCACCTCGATAAAAACTGTGAGAGTCACAGTATACGAACAACAAAT
ATTCTATTCAGCACACATTAAATGAATATAAAAGTAACCATGGCAATCGT
CCAGGATCTTGATAAACTTAGGAAACCCAGTGGTCTCTGAACACAACACG
AAGATCATTCTATAATAAGGAATCATTTAAATTAATGTTAAAGAATTGAA
AATTTATTAATGAATGGGTAACTAATTTTAGGGAACTAATTTTACCGATA
TTTGTTTAAGCTGAACATGAAAACAAGTACTCTCCATCTTCGAATAGTCC
GTCGCCACAGGTTAACTTTTAAAACTGTGGTGCTCACGGTAGTATCATGG
CCTTCAGAGGAGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040556XLOC_040556Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064662-exon-scaffold_420-1575043694:24453..24515TCONS_00064662-exon-scaffold_420-1575043694:24453..24515Clytia hemisphaericaexon
TCONS_00064662-exon-scaffold_420-1575043694:24096..24143TCONS_00064662-exon-scaffold_420-1575043694:24096..24143Clytia hemisphaericaexon
TCONS_00064662-exon-scaffold_420-1575043694:23782..23835TCONS_00064662-exon-scaffold_420-1575043694:23782..23835Clytia hemisphaericaexon
TCONS_00064662-exon-scaffold_420-1575043694:22776..22820TCONS_00064662-exon-scaffold_420-1575043694:22776..22820Clytia hemisphaericaexon
TCONS_00064662-exon-scaffold_420-1575043694:22521..22580TCONS_00064662-exon-scaffold_420-1575043694:22521..22580Clytia hemisphaericaexon
TCONS_00064662-exon-scaffold_420-1575043694:22252..22293TCONS_00064662-exon-scaffold_420-1575043694:22252..22293Clytia hemisphaericaexon
TCONS_00064662-exon-scaffold_420-1575043694:18247..18300TCONS_00064662-exon-scaffold_420-1575043694:18247..18300Clytia hemisphaericaexon
TCONS_00064662-exon-scaffold_420-1575043694:17560..17583TCONS_00064662-exon-scaffold_420-1575043694:17560..17583Clytia hemisphaericaexon
TCONS_00064662-exon-scaffold_420-1575043694:17144..17278TCONS_00064662-exon-scaffold_420-1575043694:17144..17278Clytia hemisphaericaexon
TCONS_00064662-exon-scaffold_420-1575043694:16942..17049TCONS_00064662-exon-scaffold_420-1575043694:16942..17049Clytia hemisphaericaexon
TCONS_00064662-exon-scaffold_420-1575043694:15524..15553TCONS_00064662-exon-scaffold_420-1575043694:15524..15553Clytia hemisphaericaexon
TCONS_00064662-exon-scaffold_420-1575043694:14673..14768TCONS_00064662-exon-scaffold_420-1575043694:14673..14768Clytia hemisphaericaexon
TCONS_00064662-exon-scaffold_420-1575043694:14463..14487TCONS_00064662-exon-scaffold_420-1575043694:14463..14487Clytia hemisphaericaexon
TCONS_00064662-exon-scaffold_420-1575043694:13958..14061TCONS_00064662-exon-scaffold_420-1575043694:13958..14061Clytia hemisphaericaexon
TCONS_00064662-exon-scaffold_420-1575043694:13689..13719TCONS_00064662-exon-scaffold_420-1575043694:13689..13719Clytia hemisphaericaexon
TCONS_00064662-exon-scaffold_420-1575043694:13173..13246TCONS_00064662-exon-scaffold_420-1575043694:13173..13246Clytia hemisphaericaexon
TCONS_00064662-exon-scaffold_420-1575043694:12153..12985TCONS_00064662-exon-scaffold_420-1575043694:12153..12985Clytia hemisphaericaexon
TCONS_00064662-exon-scaffold_420-1510915933:24453..24515TCONS_00064662-exon-scaffold_420-1510915933:24453..24515Clytia hemisphaericaexon
TCONS_00064662-exon-scaffold_420-1510915933:24096..24143TCONS_00064662-exon-scaffold_420-1510915933:24096..24143Clytia hemisphaericaexon
TCONS_00064662-exon-scaffold_420-1510915933:23782..23835TCONS_00064662-exon-scaffold_420-1510915933:23782..23835Clytia hemisphaericaexon
TCONS_00064662-exon-scaffold_420-1510915933:22776..22820TCONS_00064662-exon-scaffold_420-1510915933:22776..22820Clytia hemisphaericaexon
TCONS_00064662-exon-scaffold_420-1510915933:22521..22580TCONS_00064662-exon-scaffold_420-1510915933:22521..22580Clytia hemisphaericaexon
TCONS_00064662-exon-scaffold_420-1510915933:22252..22293TCONS_00064662-exon-scaffold_420-1510915933:22252..22293Clytia hemisphaericaexon
TCONS_00064662-exon-scaffold_420-1510915933:18247..18300TCONS_00064662-exon-scaffold_420-1510915933:18247..18300Clytia hemisphaericaexon
TCONS_00064662-exon-scaffold_420-1510915933:17560..17583TCONS_00064662-exon-scaffold_420-1510915933:17560..17583Clytia hemisphaericaexon
TCONS_00064662-exon-scaffold_420-1510915933:17144..17278TCONS_00064662-exon-scaffold_420-1510915933:17144..17278Clytia hemisphaericaexon
TCONS_00064662-exon-scaffold_420-1510915933:16942..17049TCONS_00064662-exon-scaffold_420-1510915933:16942..17049Clytia hemisphaericaexon
TCONS_00064662-exon-scaffold_420-1510915933:15524..15553TCONS_00064662-exon-scaffold_420-1510915933:15524..15553Clytia hemisphaericaexon
TCONS_00064662-exon-scaffold_420-1510915933:14673..14768TCONS_00064662-exon-scaffold_420-1510915933:14673..14768Clytia hemisphaericaexon
TCONS_00064662-exon-scaffold_420-1510915933:14463..14487TCONS_00064662-exon-scaffold_420-1510915933:14463..14487Clytia hemisphaericaexon
TCONS_00064662-exon-scaffold_420-1510915933:13958..14061TCONS_00064662-exon-scaffold_420-1510915933:13958..14061Clytia hemisphaericaexon
TCONS_00064662-exon-scaffold_420-1510915933:13689..13719TCONS_00064662-exon-scaffold_420-1510915933:13689..13719Clytia hemisphaericaexon
TCONS_00064662-exon-scaffold_420-1510915933:13173..13246TCONS_00064662-exon-scaffold_420-1510915933:13173..13246Clytia hemisphaericaexon
TCONS_00064662-exon-scaffold_420-1510915933:12153..12985TCONS_00064662-exon-scaffold_420-1510915933:12153..12985Clytia hemisphaericaexon
TCONS_00064662-exon-scaffold_420-1491911889:24453..24515TCONS_00064662-exon-scaffold_420-1491911889:24453..24515Clytia hemisphaericaexon
TCONS_00064662-exon-scaffold_420-1491911889:24096..24143TCONS_00064662-exon-scaffold_420-1491911889:24096..24143Clytia hemisphaericaexon
TCONS_00064662-exon-scaffold_420-1491911889:23782..23835TCONS_00064662-exon-scaffold_420-1491911889:23782..23835Clytia hemisphaericaexon
TCONS_00064662-exon-scaffold_420-1491911889:22776..22820TCONS_00064662-exon-scaffold_420-1491911889:22776..22820Clytia hemisphaericaexon
TCONS_00064662-exon-scaffold_420-1491911889:22521..22580TCONS_00064662-exon-scaffold_420-1491911889:22521..22580Clytia hemisphaericaexon
TCONS_00064662-exon-scaffold_420-1491911889:22252..22293TCONS_00064662-exon-scaffold_420-1491911889:22252..22293Clytia hemisphaericaexon
TCONS_00064662-exon-scaffold_420-1491911889:18247..18300TCONS_00064662-exon-scaffold_420-1491911889:18247..18300Clytia hemisphaericaexon
TCONS_00064662-exon-scaffold_420-1491911889:17560..17583TCONS_00064662-exon-scaffold_420-1491911889:17560..17583Clytia hemisphaericaexon
TCONS_00064662-exon-scaffold_420-1491911889:17144..17278TCONS_00064662-exon-scaffold_420-1491911889:17144..17278Clytia hemisphaericaexon
TCONS_00064662-exon-scaffold_420-1491911889:16942..17049TCONS_00064662-exon-scaffold_420-1491911889:16942..17049Clytia hemisphaericaexon
TCONS_00064662-exon-scaffold_420-1491911889:15524..15553TCONS_00064662-exon-scaffold_420-1491911889:15524..15553Clytia hemisphaericaexon
TCONS_00064662-exon-scaffold_420-1491911889:14673..14768TCONS_00064662-exon-scaffold_420-1491911889:14673..14768Clytia hemisphaericaexon
TCONS_00064662-exon-scaffold_420-1491911889:14463..14487TCONS_00064662-exon-scaffold_420-1491911889:14463..14487Clytia hemisphaericaexon
TCONS_00064662-exon-scaffold_420-1491911889:13958..14061TCONS_00064662-exon-scaffold_420-1491911889:13958..14061Clytia hemisphaericaexon
TCONS_00064662-exon-scaffold_420-1491911889:13689..13719TCONS_00064662-exon-scaffold_420-1491911889:13689..13719Clytia hemisphaericaexon
TCONS_00064662-exon-scaffold_420-1491911889:13173..13246TCONS_00064662-exon-scaffold_420-1491911889:13173..13246Clytia hemisphaericaexon
TCONS_00064662-exon-scaffold_420-1491911889:12153..12985TCONS_00064662-exon-scaffold_420-1491911889:12153..12985Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_420supercontigscaffold_420:12153..24515 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.827804	0.697725	1.43513	2.02779	0.0984965	0.247404	0.0125773	0.697757	0.454761	0.462892	0.177016	0.00500459	0	0.549836	0.601707	1.13338	0.479708	0.724398	0.586837	0.492078	0.171441	0.0045789	0.0274079	0.0163052	0	0.0438502	0.359911	0.00127584	0	0.571709
Blast
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BLAST of TCONS_00064662 vs. Swiss-Prot (Human)
Match: MACD2 (O-acetyl-ADP-ribose deacetylase MACROD2 OS=Homo sapiens GN=MACROD2 PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 9.254e-46
Identity = 56/108 (51.85%), Postives = 69/108 (63.89%), Query Frame = 1 
Query:  763 GHRLPAKYVIHTVGP------RNKDGEILKSCYTNVFSLVREKNIKTIAFPCIVTGDFGFSIEEACNIALKTTRDWLEGHHEEVERIIFCVFDEDTKKIYAKLMKLYF 1068
            G+ LPAKYVIHTVGP           E L +CY +   LV+E NI+++AFPCI TG +GF  E A  IAL T ++WL  +H EV+RIIFCVF E   KIY K M  +F
Sbjct:  133 GYDLPAKYVIHTVGPIARGHINGSHKEDLANCYKSSLKLVKENNIRSVAFPCISTGIYGFPNEPAAVIALNTIKEWLAKNHHEVDRIIFCVFLEVDFKIYKKKMNEFF 240

HSP 2 Score: 96.6709 bits (239), Expect = 9.254e-46
Identity = 52/117 (44.44%), Postives = 71/117 (60.68%), Query Frame = 3 
Query:  420 RFLVVKLSEKRKMYVVNHVKMESIEVYHNP---AGIDFDVSLDSFFGPNNAINKRVSLYTGDIRCLEIDAIVNAANESLLGGGGVDDAIHKAAGESLKKECELLGGCRPGYAKISGG 761
            R L + L E+RK Y+ +++ + SI  +       G + + +         ++ ++VSLY GDI  LE+DAIVNAAN SLLGGGGVD  IH+AAG  L  EC  L GC  G+AKI+ G
Sbjct:   17 RLLKMTLEERRKEYLRDYIPLNSILSWKEEMKGKGQNDEENTQETSQVKKSLTEKVSLYRGDITLLEVDAIVNAANASLLGGGGVDGCIHRAAGPCLLAECRNLNGCDTGHAKITCG 133
The following BLAST results are available for this feature:
BLAST of TCONS_00064662 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MACD29.254e-4651.85O-acetyl-ADP-ribose deacetylase MACROD2 OS=Homo sa... [more]
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