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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00064675 ID=TCONS_00064675|Name=TCONS_00064675|organism=Clytia hemisphaerica|type=transcript|length=1010bp
CTTGGAAGTATGTGATGTGATttcggtattttcaaaaaatgtttagttcc
ccTTTCATTTACAGGGAGCACCTGCAACTGCAGCAGGAGCTGCAGAATTG
GCAGGATCAGAGCTATATATAACTTTACTTCTATCAGTTAAttctatttt
atcaaaatttgaaaaaaagaatccCAAATCTTACAGTTTACTTAATTATG
TCTATTTACCAGGAGACCTTGCAACTATAGGAGGAGCTGCAGAATTAGCA
AGATCAATGCTATATAAAACTTCACCTCTCAGGTAATAATcctatttttt
cagatttaaaaaagagtCGAATCTTGTTTCAGAAAAGGTCCATGTATAGA
CTATAGACTATTTCTAAAATctcgaaaatcttaaaatataaTACAATTTG
AAAAAACGATGCCATAGTACACAAAATGTCGAGACTTAAAGACAGTTTGC
TGATTCTTAAAAAAAGAGCGTCACTTTCAGTCCTTGACGTTATCGATTTA
TTACTTAGGTGAATGCATGTCTCAACCTGAAATGATTAGATATTTTGTCg
atattttatcttttatttatcTTTATAATTTCCATTAATTGATTaacttt
ttacattttacattgTTTCCTTACTGCCTTACTTAATATTCCTTACATTG
CTAAAATGGCTGCAAGAAATGTTGATGAAGACCCTCAAGTGAGTTTTCCA
ATATTCCTTATATTGAATCAAAATTGCAAATCTTTCctttttaaggcttt
attaGCAGGCTACTAACTTGTTGCTGCAAGGCAAGTATTATTATTGTTTC
TTGCTAGTTACACATCAATCAAGTTCGTGTTCATTTTACTTTTGCCTTTA
TCTTGTGTTGTTTTAGTTGTTGATCAATCAACTCAGAGGCGAACTTATAC
ACGCTGAGAACCACATACGCCAGCTAACGGCCGAGCAGGATGTGAGTtcc
atcattaaaataaatattgCATAAACTTAAAACAAATTACtttattatgt
tattttttta Run BLAST on NCBI transcript from alignment at scaffold_420:39067..40076 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00064675 ID=TCONS_00064675|Name=TCONS_00064675|organism=Clytia hemisphaerica|type=transcript|length=1010bp|location=Sequence derived from alignment at scaffold_420:39067..40076 (Clytia hemisphaerica)
taaaaaaataacataataaaGTAATTTGTTTTAAGTTTATGcaatattta
ttttaatgatggaACTCACATCCTGCTCGGCCGTTAGCTGGCGTATGTGG
TTCTCAGCGTGTATAAGTTCGCCTCTGAGTTGATTGATCAACAACTAAAA
CAACACAAGATAAAGGCAAAAGTAAAATGAACACGAACTTGATTGATGTG
TAACTAGCAAGAAACAATAATAATACTTGCCTTGCAGCAACAAGTTAGTA
GCCTGCtaataaagccttaaaaagGAAAGATTTGCAATTTTGATTCAATA
TAAGGAATATTGGAAAACTCACTTGAGGGTCTTCATCAACATTTCTTGCA
GCCATTTTAGCAATGTAAGGAATATTAAGTAAGGCAGTAAGGAAAcaatg
taaaatgtaaaaagttAATCAATTAATGGAAATTATAAAgataaataaaa
gataaaatatcGACAAAATATCTAATCATTTCAGGTTGAGACATGCATTC
ACCTAAGTAATAAATCGATAACGTCAAGGACTGAAAGTGACGCTCTTTTT
TTAAGAATCAGCAAACTGTCTTTAAGTCTCGACATTTTGTGTACTATGGC
ATCGTTTTTTCAAATTGTAttatattttaagattttcgagATTTTAGAAA
TAGTCTATAGTCTATACATGGACCTTTTCTGAAACAAGATTCGactcttt
tttaaatctgaaaaaataggATTATTACCTGAGAGGTGAAGTTTTATATA
GCATTGATCTTGCTAATTCTGCAGCTCCTCCTATAGTTGCAAGGTCTCCT
GGTAAATAGACATAATTAAGTAAACTGTAAGATTTGggattctttttttc
aaattttgataaaatagaaTTAACTGATAGAAGTAAAGTTATATATAGCT
CTGATCCTGCCAATTCTGCAGCTCCTGCTGCAGTTGCAGGTGCTCCCTGT
AAATGAAAggggaactaaacattttttgaaaataccgaaATCACATCACA
TACTTCCAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00064675-exon-scaffold_420-1491911889:39067..40076 | TCONS_00064675-exon-scaffold_420-1491911889:39067..40076 | Clytia hemisphaerica | exon |
| TCONS_00064675-exon-scaffold_420-1510915933:39067..40076 | TCONS_00064675-exon-scaffold_420-1510915933:39067..40076 | Clytia hemisphaerica | exon |
| TCONS_00064675-exon-scaffold_420-1575043694:39067..40076 | TCONS_00064675-exon-scaffold_420-1575043694:39067..40076 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_420 | supercontig | scaffold_420:39067..40076 . |
Blast
The following BLAST results are available for this feature:
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