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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00064754 ID=TCONS_00064754|Name=TCONS_00064754|organism=Clytia hemisphaerica|type=transcript|length=1430bp
CAGCAGATATTCAAAAAAGGTCGTCGCCGGATGCTTCTGAAAAAGGCGTT
TTTGATTGTACAatcatgtaaatttttttttagtaaataaagaataaaaa
tgtTGGTTATAATACCTATTGGGTTGATCCGCAGTCTCTGCTGTCCAGAA
AGAAGCCCTTCTTATTCCTATCACGGACCACCAACTGTGATAGGACCAAA
TGGCATGACTACTGTACCGGCTCAAAGAACATTCAGTATGAATGTGAAAT
TTATCTGTGGGCTAGgGATTACGCAAATTGTGATCGGACTATTAACTGCT
GTCTTGGCGATTGTTGCAAAAGCAGTTTTCCATCATAATTATTCGGTGAA
TGAAAATTGTTCTGGCATCTGGTTTGGTATCTGGATTTTAATCACCGGTA
TTGTTGGTGTGATGTCGGCCAAGAAGCCTAAACAAACATCTATTAATGGT
GTCAATATGGGATTCAATATCGTGTGTTGTGTCGTCTCGTTTTTTGTTGG
AAGATTTTTCTTAAGTGGCTTTGTTCATTACAAGGATTGCAATTTGTTAG
ATGTATATGACAACTTAAATGACACGTACGATTATCAGCTCTTCCGAGAT
TGTTACGACGATAAGAAAGTTGGTGCACCAATTTTTGCCACAATCATGGG
TCTGATGATCCTTGAGTTTATCATTTCCATGACCATCTCAATCACTTGCT
GCCGAAACTCAGGTTGTTGTTGTCGATCAAATACCTCAGGAGCATTGGTT
ATGAACGAGCACCCAACTCCTACTGATCTCGTCTCACCTAATGGTGTTGT
CGTTTCTGGTCAATGTCAATACCCTGGTCAACAAGCTTTTTACCCACCTG
CTGCAGGCTACCCACCACAATCACAAGTCATCTACCCTGCTGGCGTCTAT
CCAAATCACCAACAATGTGTTACAACCACAGCGCATATGGGAGGTGTTCA
GAATCTTGCTTATTCTAACCAGATGACACATGCCCAACTACCTCCATATG
CAAAGTAGATTGTTTGAAAGTTTTGTTCAATGGAAACGTCTACCACTTCA
AGTACCTGACAACATATTCCAATATTTCTGGTGACCGACCTCgaacaaaa
aaaacttaaaaatgtaGAAACAGAAACCAGTAAAATAAGCAACTGCTAGT
AAAATAACCCAATAAACAAACGCAGTTTGGTAATGTATCCCAAcgaaagt
tttatataattgtTATCATATCATTTGTATTTAAATACCCTTTTCTCACT
TTGtagttaaatttttttaatgggGTAGCTTTCTATCCGTATGTATGATT
AAATAAATGACCAATGTAACCTAGTTTGGTTTGTATCAAACCATATATCG
TTTATAGACTCTAGTCTAAGTCGCTGAGCTCTAGGTAGTGGTCTGTAAGG
AGCATTCACAAATCTGTTAGAGGTTGCCAG Run BLAST on NCBI protein sequence of CD20 like domain containing protein >TCONS_00064754-protein ID=TCONS_00064754-protein|Name=CD20 like domain containing protein|organism=Clytia hemisphaerica|type=polypeptide|length=302bp
MLVIIPIGLIRSLCCPERSPSYSYHGPPTVIGPNGMTTVPAQRTFSMNVK
FICGLGITQIVIGLLTAVLAIVAKAVFHHNYSVNENCSGIWFGIWILITG
IVGVMSAKKPKQTSINGVNMGFNIVCCVVSFFVGRFFLSGFVHYKDCNLL
DVYDNLNDTYDYQLFRDCYDDKKVGAPIFATIMGLMILEFIISMTISITC
CRNSGCCCRSNTSGALVMNEHPTPTDLVSPNGVVVSGQCQYPGQQAFYPP
AAGYPPQSQVIYPAGVYPNHQQCVTTTAHMGGVQNLAYSNQMTHAQLPPY
AK Run BLAST on NCBI transcript from alignment at scaffold_423:348525..361086+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00064754 ID=TCONS_00064754|Name=TCONS_00064754|organism=Clytia hemisphaerica|type=transcript|length=12562bp|location=Sequence derived from alignment at scaffold_423:348525..361086+ (Clytia hemisphaerica)
CAGCAGATATTCAAAAAAGGTCGTCGCCGGATGCTTCTGAAAAAGGCGTT
TTTGATTGTACAatcatgtaaatttttttttagtaaataaagaataaaaa
tgtTGGTTATAATACCTATTGGGTTGATCCGCAGTCTCTGCTGTCCAGAA
AGAAGCCCTTCTTATTCCTATCACGGACCACCAACTGTGATAGGACCAAA
TGGCATGACTACTGTACCGGCTCAAAGAACATTCAGTATGAATGTGAAAT
TTATCTGTGGGCTAGGTAAGATCTTTATTCANTGCATACTAAAAAGTAAC
TTCAAATTAATCTCGATCAATTGTTATCCCCGGAACAGTAATGTCAACCC
TCGGCTGACATTtggaggttctaccgagatccTAATGGGTCTCGGACCAT
TGTGCTGTTCTGGGGAATGTAATAGAAATGAGAAAATCTGAAGATTCTTT
AACAAAGAGATCAATATTGAATGAATTCTTATCCCCGGAACAGTAATGTC
AACCCTCGGCTGACACTAGGTCAAATGGCATCGACTCATTGGCGGATTTG
GGACAATGGTgcactcgggtaagttatggcatgtcttaaaattactagtc
gatcatttgaaaaaaaaaatttttcgaaattatgattacgtcagcagaaa
ttagtgGTGGATTTGAGACAAAAATGCAAGTACATCGGAAACATGCGAGG
AGtccaacgctcgttaaaagacaatgaaatcaCAATTATAAGCCTCTCCA
TGTGATCAGTTCTACACGGTCTAAAACCACCTATGCAACTGTCTGGTGTC
TTATAAGTAGTAACTTTTTCTTTAATCTCAAACGCAAAAGCATTTAGTCT
GAATCGTAGACCTATACAAAACCCACAAAAGTAGcaggaattttttttct
cgatacgGATAAGCTCTTACCTTttgaaatcaatcaaagtttgCTTGCAA
CATTTTTAAAACGAAAAGATGGCGCAGAATTGACGTTGCGTTTTGTGTCA
TGCGTTGAAATCCGggggtttgacgtcacttttttacGTCAAAAAGAGAA
GCTTTTTAAAATGTTAATGTTTTTAGCACTTTTGTATCATCACTATCTAC
AGTCTTTGAATTTATTTCAAAGGGCTAAGTTTGGTATTTTTGAAACCCta
aatttttcctcttttgatTGATATTAAAATTACATTACGAATGAGTTATG
ACAGAAAATTCCAAGTTATTTTACAACCAAAACCTTTTTCAGCTATATCC
TAAGAAAAGGCAATTTTCTAAGTGCATTTAATGTAAGAAATATTTGTCTT
GTAATTTGGCACCCCTCTCAGAAGAAACTTCAGTTCTTTTtctttccaac
gatgtataaaTATCTATGGGttgtaatgatttttctttacgCTAGCTTGG
CTAAAAGATTTGTCACTCCTCAGACCCCCAAAAAAATCCAGCTGGTAAAA
ATTGACGTTACTCACAAAAAAGCTTGTATTGAAAGGGTCACCTGGACCCA
AATTTGGCACCTATCCCTGGAGAAAGTAGATAAGAAATGCCAAAAAATGA
TGTGTAAAAGCTTATATCTTGTAAGGGAATTTTAGTACGCACTGGTCCTC
TGAAGTTTCATGAaatgcaaaatgcaaagttttatgttgttttttctcga
aagcattttgttttgagtgcattttcaagcaatctagagctcaaattttc
aaaatttctcgcctcgggccaaaccatcgTTGGCCCTTGCGGTGTCACTT
ACCTTCAGcccctaccctgagtatcagaggttaagttttcaaggaatata
ttaacctctgaagaccaataatagaaattttatcgcgcatgtgttaatct
aatcactgtagaaagaatcaaagatgaagagcaaatattaccttattaat
gtctagcagactgtatcagtgtgcagtttactatttacgaattccccaaa
aacctccaagtgtaatcgaattgagtttctttcgaaagaaatcttttaca
tgatccccaaatgtataacagtaattactaaactattaatagtggaatgt
cacttttaattgaatcgaaataatagacagactttatgttatgattctct
atctNNttttttgttgtgttttcaacgacgggaataaaaatatcaacttt
gaacttcatccaagatcttggatggtcgtcatggttacttttgtcttcgt
tgattgcgcgatgcATAGAATCTctattcgtcggcacagcgtcaatatat
gatttttacctgtgcttttcacggtattcAGCCCCCTCAATataaaaatg
cttcctacggcactgtataTATTCATAATTAATTCAACTAGAactttgta
cgagttccaatcctaTCATTCATTTCGAAATGATTGGAAAACCGTGAAAG
TTATAACCATCGATGTTATaacctttcttttgatattgtaattaattaac
gcaaagggggaTGGGATTGCAAGTCGTACAAACGAATAAATTTGGGCAGA
TTTAttgctatttttagattcagtgCATTGTGCTATAGGGGTGATATCAT
ACAGTGTACGATTTGGAATCTCTGATCGAGTCAAAGCTCCTCATATActa
ttcaaactttttcaaaatctttaattatatttttctaggGATTACGCAAA
TTGTGATCGGACTATTAACTGCTGTCTTGGCGATTGTTGCAAAAGCAGTT
TTCCATCATAATTATTCGGTGAATGAAAATTGTTCTGGCATCTGGTTTGG
TATCTGGATTTTAATCACCGGTATTGTTGGTGTGATGTCGGCCAAGAAGC
CTAAACAAACATCTATTAATGGTGTCAATATGGGATTCAATATCGTGTGT
TGTGTCGTCTCGTTTTTTGTTGGAAGATTTTTCTTAAGTGGCTTTGTGTA
AGTATCCTAATTCATAAGATTCGTGTATCtgttacagtatatggccccca
aaacggagacggcccccaaaacggaggctttcattaaaatgaagattctg
acttgtagatttatcagaatttaacgatttttgtttattttgaaagaatg
atggttatactaaaaAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNtaaaatttcaaacctccgttttg
ggggccattagaaaaaagctacctatctttaagcgattgaaaaatattgt
tgaaattgaaaattttgaaaaagaacatcaaggaaataaagtagagatgt
taaaggttttcatgcagcaaaaatttttgtgaaatctcttttcctctaga
tttgagagacatttcaaatttgatcgccgttttgggggccacatactgta
catgctattttttattcaatttaaagAGAAAGAATGCACAAATCTGTGCA
TATTTCACTTCGAGAAGGAtgctcaaaaaagtttttgtaatCATTCAAGA
ACTCAATAAGAACTCGTCATTTTTATAGAGAAAGATTATAAATAATCTCA
CTTCTCAAAAGAGTTTtcaatgataaaaaagttgattacTACGGGGTATA
GGTAAAAAACTTTGCCATCAGTATCATAGGTTTTTTCTTAGTCACCGTAG
GAAGTTATAAAATACTCGAAAAAATACTCATGAGTGAAGAACAATGGTAT
TGATAAAGGAGCCcccagtcacctttcaaatcGCGCAATCCCgcgaaaaa
aattccaaatcacgttatcacgaattaaatttcctttctatcacgatcac
gtttgttcctccgatcacgcaatcacgcactttaaaatcttaaattacGA
AATCACGAACCTGAAAATGATGCCAATCACACCAGCCATGAtgaaaataa
tcattttctcataaaaaaagaccGTCTCTTCTGTAACCCATACTGGCAAC
CTGACAACTCAGTAAAATCATCCCTAAGTTGTGCATTTCCCATCCCCAAG
TGTCCCCTATTGAATATTTAGTCAAAGTTAGCCcgttgaaaatatcaaaa
aatttcttactTCTTCTTTGTAGTCATTACAAGGATTGCAATTTGTTAGA
TGTATATGACAACTTAAATGACACGTACGATTATCAGCTCTTCCGAGATT
GTTACGACGATAAGAAAGTTGGTGCACCAATTTTTGCCACAATCATGGGT
CTGATGATCCTTGAGTTTATCATTTCCATGACCATCTCAATCACTTGCTG
CCGAAACTCAGGTTGTTGTTGTCGATCAAATACCTCAGGAGGTGAGTAAA
TGGGCATTCACTTGCAACATAACCACATTACTGTCTGGAGTACCTGGGTG
AGCACTCAAATCGAGAAACAGTATATGCAGGCAACAATCAGGGTCTCGAA
ATTGAACCctttgaaagtgaaaatttagCAAATATTGGGTTAATTTGGGT
GAAAAATCGACTCTGTCAGTTTCTTGGAATTTTCTGTTCATTTTACGACA
AAAGATGGTCAGGGGGTCAGATTTCCCAAAATCTCCGTTGttctcacttt
ttacacccCCTTAGACTGCTCGTTTCGGTCCTTACAGTGCATTCTAGAAA
GCCTGAAAACGTACCCTTGGGCTCATAAAGCACTGTAAAGTTCAATTATG
AAACATTTTAATGTTGTCATTTAAGCATTGGTTATGAACGAGCACCCAAC
TCCTACTGATCTCGTCTCACCTAATGGTGTTGTCGTTTCTGGTCAATGTC
AATACCCTGGTCAACAAGCTTTTTACCCACCTGCTGCAGGCTACCCACCA
CAATCACAAGTCATCTACCCTGCTGGCGTCTATCCAAATCACCAACAATG
TGTTACAACCACAGCGCATATGGGAGGTGTTCAGAATCTTGCTTATTCTA
ACCAGATGACACATGCCCAACTACCTCCATATGCAAAGTAGATTGTTTGA
AAGTTTTGTTCAATGGAAACGTCTACCACCACAAGTACCTGACAACATAT
TCCAATATTTCTGATGACCGACCTCgaacaaaaaaacttgaaaatgtaGA
AGCAGAAAATTACCAGTAAAAAAAGCAACTGTCAGTAAAATAACCCAATA
AACAAATGAAGTTTGGTAATGTATTCCAACGAAAATATTATGTAATTGTT
ATCATATCATTGTATTTAAATACTCTTTTCCTCacttagactagtaaact
agtcggttattacttataaccttataataaaactgtcaatcaaataatgt
aaacactaattaaatattcagcgtgcatgagagaaaaggaaaataaccga
ctagaagctacttccaacgcctttttttcttcacctaaaatcgtaaggag
agacatacaaaTTTCTGtgtgtctgacccgtgcgggattgcatttatttt
cctttctgtttattgcgtttttagaaatgcttaTATTTATTAATATGTTC
CCAtgttcaatgttactatgaaatatcatttagtcaaaaaagttggatgg
attctcaaaaacctaaaaaaagttgtaaaattaaacaacgttttttgagg
gaaatagcttctagtcgttgaaattcagaaaagagaagcaacttcacccc
ttcgattctttttatttggagcttgattttttgtatatgagtctgttttc
aacgactagtttactagtctattcCTCACTATGTAGTTAAATATGTATTT
TATAGGGTTGCTTTCTATCCGTGAATCCTTTCTGTATGTATGATTAAATA
AATGACCAATTTAACCTATTTTGCTTTGTATTAAACCATATATCGTTTAT
AGAGTCGTTTATACTTATCGTTTATGTGATATGATAAtatacgagttgcg
agttacgagttaccagttacgagttgcatttagaaccacgagttgcgagt
tactttttacaagttacgagttacgagttgcattttaacaaaataaaatc
gcgagttacgagttacgaatTGCATTTTAACTcacaaaattcgcgagttg
caaattgaaagtgcgagttgcaaattaaaagtgcgagttgcaaattaaaa
gtgcgagttgcaaattaaaagtgcgtgTTACAAATTNNNNNNTCTATTGA
TAAaaggaaagatattttttaaatgattaaatGATTATTGCTGCTCACTA
TTATACATAAGAAGAGCAAATATTTGgtggagaaagaaaaagaatgtaCA
AAAAGTATTTACGAGTGTAAAGAACTGTAGAGAAAAGTGTCCCGGGCGGG
GATAATAGGTTTGgatgcgttgttactaaaaaggGTAACATGGGGTAACA
CGGGGTAATAGGGGGTAACAAGGTAACAGGCTGAGAACGATGGCTCTAAG
GGGTTGTTTCACCTACAGTAATTATAAGATCACATGCAAAGCGTGTACAA
TCATGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNAAATAAGGAActgataaggaactttgaggctgaaattttctgtaaa
aataaggaactccaggctcagagcaaagttaaggttccttataaaaaaaa
aacgtgtatcagcaTCAAATTTATAGGTGACAAAACCCCAAATAAGTCCT
TCGTAGAGTgcctttttcgaaagttttggggtaaaagcagaaaattttag
aaaattttggattttcagtTCCAATCAAGGTCActcttttcgcaaatttc
ggcaaaatttttgaaaaaccagTCCCATGTAGAGTCATATTTtggaacct
cagcggagcatccccgtcagtcggcaagggtagtaccccccacCCCCGGG
GACAAAACCTTTGATGGGATTGCttaaagaagctttatatttgaccatca
gatcattatttcataaaaataagtgattttatcaacataaggacaataga
ataattgattagaatCTCTAAAACTGCCCTTCCCAAAGTTTGTCTCTTGA
CAATATTTATCCATTTAtatcaaaggcatctcattctgtacaattaaaat
atttggtttaataAAGCTTGCAGGTATCACACTTAAGTAGCCTGtcaata
attttgtcaaaaagtgtcactttgtcttgAAAATGACAGGTAACGTCCAC
TTTATTAAAAGCAACATTAAAGATGTTTCTCGATAGGAAGAAACACGCGC
ATTtcctttcaaaacttaaagttaTGTAAAgctctgttttgtttttatac
aaaaatgagcGAAAAAAAGTGTGATTTGAGTGGTTTCACAACTTTAGTCA
CAAAACGTAAACAGTTTGGCTGAATTTTCCATGCTTTGCTTTgggtttag
ctttttttgtgctgttattatttaagataacaatctcagacttgatttta
atttgcagctcgcacttttaatttgcagctCACACTTTTAATATGCAACT
CGCACCTTCAATTTGCAACTCGCACTTTTAAtttgcaactcgcgaatttt
gtgtgttaagatgcaactcgtaactcgcaactcgcgattttattttgtta
aaatgcaactcgtaactcgcaactcgcgattttattttgttaaaatgcaa
ctcgtaactcgtaactcgtaaaaagtaactcgcaactcgtggttctaaat
gcaactcgtaactcgtaactcgtaaaaagtaactcgcaactcgtggttct
aaatgcaactcgtaactcgtaacttgtAACTCGTATCTCGCATATGAAAA
ATCCTCTCGTTTATAGTCTAAATCGCTGAGCTTTAGGTAGTGGTCTGTAA
GGAGCACTCGCAAATCTGTTAGAGGTTGCGAAATATGAGAAACGTTTCTG
NNatacccgaagttttcctcttcgtcggtcaaatcgctataaaatcgctt
aaatttcctcattcgccgtaccagatataaaaagcttccgtcgtgcctgc
gTAACGATGTCGGTAGATGCCGATTGTTATACCTTTTCATACCTATAATC
ATGTAAATTCTTTTTagtaaataaagaataaaaatgtTGGTTATAATACC
TATTGGGTTGATCCGCAGGCTCTTCTGTCCAGAAAGAAGCTCTTCTTATT
CCTATCACGGACCTCCAACTGTGATAAGACCAAATTGCATGGCTACTGTA
CCGGCTCAAGGAACATTTAGTATGAATGTGAAATTTATCAGTGGGCTAGG
TAAGATCTTTATTTATGTTCTAtggactacacgcttttttttttNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttg
ggccaaaccatggttggccctcgcggtgtcactaaacttcagccccctca
atataaaaatgcttcctacggcactgtataTATTCATAATTAATTCAACT
AGAactttgtacgagttccaaccCCATCATTCATTTCGAAATGATTGGAA
AACCGTGAAAGTTATaacctttcttttgatattgtaaTTAATTAACGAAA
AGGGGGATGGGATTGCAAGATAAAGCAAGATAAATTTGTGCAgatttgtt
aatatttttagaTTAGGTGCGTTAGGGGTGATATCATACAGTGTAAGATT
TGGAATCTCTGATCGAGTCAAAGCTCCTCATATActattcaaactttttc
aaaatctttaattatatttttctaggGATTACGCAAATTGTGATCGGAGT
ATTAACTGCTGTCTTGGGGATTGTTGCAAAAGCAGTTTTCCATCATAATT
ATTGGGTGAATGAAAATTATTCTGGCATCTGGTTTGGTATCTGGATTTTA
ATCACCGGTATTGTTGGTGTGATGTCGGCCAAGAAGCCTAAACAAACATC
TTTCAATGGTGTCAATATGGGATTCAATATCGTGTGTTGTGTCGTCTCGT
TTTTTGTTGGAAGATTTTTCTTAAGTGGCTTTGTGTAAGTATCCTAATTC
ATAAGATTCGTGTTTTGTTCctccgatcacgcaatcacgcactttaaaat
cttaaatcacgaaatcacgaaTTTGAAAATGATGCCAATCACGCCAGCca
tgatgaaaataattattttacaTATAAAAAAAGACCGTCTCTTCTGTAAC
CCATACTGACAACCTGACAACTCAGTTGAATCATCCCTAAATTGTGCATT
TCCCATCACCACGTGGTCCCCCATTGGAACATTTAGTCAAAGTTAGCCCa
ttgaaaatagcaaaaaattcTTGCTTCTTCTTTGCAGTTATTACAAGCAT
TGCAATTTGTTAGATGTAAACGATACGGCATACGAATATCTGCTCTATCG
CGATTGTGACGACGATAAGGAAGCTGGTGTGTCAATTTTTGCCACAATCA
TGGGTCTGATGATCCTTGAGTTTATCATTTCCATGACCATCTCAATCACT
TGCTGCCGAAACTCAGGTTGTTGTTGTCGATCAAATACCTCAGGAGGTGA
GTAAATGGGCATTCATTTGCAACATAACCACATTACTGTCTGTAGTACCT
GGGCGAGCACTCAAATCAAGAAACAGTATATGCAGGCAAAAATCAGGGTC
TCGAAATTGAACCctttgaaagtgaaaatttagccaaatttgggtaaatt
tgggtgaaaaatcGACTCTTCCAGTTTCTtggaattttttgttcatttta
cgACAAAAGATGGTGAGGGGGTCAGATTTCCCAAAATCTCCGTTGttctc
actttttacacccttagacTGCTCGTTTCGGTCCTTACAGTGCATTCTAG
AAAGCCTGAAAAACGCGCGTACGTNCTCCGTTGttctcactttttacacc
cCCTTAGACTGCTCGTTTCGGTCCTTACAGTGCATTCTAGAAAGCCTGAA
AACGTACCCTTGGGCTCATAAAGCACTGTAAAGTTCAATTATGAAACATT
TTAATGTTGTCATTTAAGCATTGGTTATGAACGAGCACCCAACTCCTACT
GATCTCGTCTCACCTAATGGTGTTGTCGTTTCTGGTCAATGTCAATACCC
TGGTCAACAAACCGTTTACCCACCACAATCTGCTGCAGGCTACCCACCCC
AATCACAAGTCATCTACCCTGCTGGCGTCTATCCAAATCACAAACAATGT
TTTACAACCACAGCGCATATGGGAGGTGTTCAGAATCTTGCTTATTCTAA
CCAGATGACACATGCCCAACTACCTCTATATGCAAAGTAGGTTGTTTCGA
AGTTTTGTTCAATGGAAAGGTCTACCACTTCAAGTACCTGACAACATATT
CCAATATTTCTGGTGACCGACCTCgaacaaaaaaaacttaaaaatgtaGA
AACAGAAACCAGTAAAATAAGCAACTGCTAGTAAAATAACCCAATAAACA
AACGCAGTTTGGTAATGTATCCCAAcgaaagttttatataattgtTATCA
TATCATTTGTATTTAAATACCCTTTTCTCACTTTGtagttaaattttttt
aatgggGTAGCTTTCTATCCGTATGTATGATTAAATAAATGACCAATGTA
ACCTAGTTTGGTTTGTATCAAACCATATATCGTTTATAGACTCTAGTCTA
AGTCGCTGAGCTCTAGGTAGTGGTCTGTAAGGAGCATTCACAAATCTGTT
AGAGGTTGCCAG Coding sequence (CDS) from alignment at scaffold_423:348525..361086+ >TCONS_00064754 ID=TCONS_00064754|Name=TCONS_00064754|organism=Clytia hemisphaerica|type=CDS|length=3636bp|location=Sequence derived from alignment at scaffold_423:348525..361086+ (Clytia hemisphaerica)
atgtTGGTTATAATACCTATTGGGTTGATCCGCAGTCTCTGCTGTCCAGA
AAGAAGCCCTTCTTATTCCTATCACGGACCACCAACTGTGATAGGACCAA
ATGGCATGACTACTGTACCGGCTCAAAGAACATTCAGTATGAATGTGAAA
TTTATCTGTGGGCTAGgGATTACGCAAATTGTGATCGGACTATTAACTGC
TGTCTTGGCGATTGTTGCAAAAGCAGTTTTCCATCATAATTATTCGGTGA
ATGAAAATTGTTCTGGCATCTGGTTTGGTATCTGGATTTTAATCACCGGT
ATTGTTGGTGTGATGTCGGCCAAGAAGCCTAAACAAACATCTATTAATGG
TGTCAATATGGGATTCAATATCGTGTGTTGTGTCGTCTCGTTTTTTGTTG
GAAGATTTTTCTTAAGTGGCTTTGTTCATTACAAGGATTGCAATTTGTTA
GATGTATATGACAACTTAAATGACACGTACGATTATCAGCTCTTCCGAGA
TTGTTACGACGATAAGAAAGTTGGTGCACCAATTTTTGCCACAATCATGG
GTCTGATGATCCTTGAGTTTATCATTTCCATGACCATCTCAATCACTTGC
TGCCGAAACTCAGGTTGTTGTTGTCGATCAAATACCTCAGGAGCATTGGT
TATGAACGAGCACCCAACTCCTACTGATCTCGTCTCACCTAATGGTGTTG
TCGTTTCTGGTCAATGTCAATACCCTGGTCAACAAGCTTTTTACCCACCT
GCTGCAGGCTACCCACCACAATCACAAGTCATCTACCCTGCTGGCGTCTA
TCCAAATCACCAACAATGTGTTACAACCACAGCGCATATGGGAGGTGTTC
AGAATCTTGCTTATTCTAACCAGATGACACATGCCCAACTACCTCCATAT
GCAAAGTAGatgtTGGTTATAATACCTATTGGGTTGATCCGCAGTCTCTG
CTGTCCAGAAAGAAGCCCTTCTTATTCCTATCACGGACCACCAACTGTGA
TAGGACCAAATGGCATGACTACTGTACCGGCTCAAAGAACATTCAGTATG
AATGTGAAATTTATCTGTGGGCTAGgGATTACGCAAATTGTGATCGGACT
ATTAACTGCTGTCTTGGCGATTGTTGCAAAAGCAGTTTTCCATCATAATT
ATTCGGTGAATGAAAATTGTTCTGGCATCTGGTTTGGTATCTGGATTTTA
ATCACCGGTATTGTTGGTGTGATGTCGGCCAAGAAGCCTAAACAAACATC
TATTAATGGTGTCAATATGGGATTCAATATCGTGTGTTGTGTCGTCTCGT
TTTTTGTTGGAAGATTTTTCTTAAGTGGCTTTGTTCATTACAAGGATTGC
AATTTGTTAGATGTATATGACAACTTAAATGACACGTACGATTATCAGCT
CTTCCGAGATTGTTACGACGATAAGAAAGTTGGTGCACCAATTTTTGCCA
CAATCATGGGTCTGATGATCCTTGAGTTTATCATTTCCATGACCATCTCA
ATCACTTGCTGCCGAAACTCAGGTTGTTGTTGTCGATCAAATACCTCAGG
AGCATTGGTTATGAACGAGCACCCAACTCCTACTGATCTCGTCTCACCTA
ATGGTGTTGTCGTTTCTGGTCAATGTCAATACCCTGGTCAACAAGCTTTT
TACCCACCTGCTGCAGGCTACCCACCACAATCACAAGTCATCTACCCTGC
TGGCGTCTATCCAAATCACCAACAATGTGTTACAACCACAGCGCATATGG
GAGGTGTTCAGAATCTTGCTTATTCTAACCAGATGACACATGCCCAACTA
CCTCCATATGCAAAGTAGatgtTGGTTATAATACCTATTGGGTTGATCCG
CAGTCTCTGCTGTCCAGAAAGAAGCCCTTCTTATTCCTATCACGGACCAC
CAACTGTGATAGGACCAAATGGCATGACTACTGTACCGGCTCAAAGAACA
TTCAGTATGAATGTGAAATTTATCTGTGGGCTAGgGATTACGCAAATTGT
GATCGGACTATTAACTGCTGTCTTGGCGATTGTTGCAAAAGCAGTTTTCC
ATCATAATTATTCGGTGAATGAAAATTGTTCTGGCATCTGGTTTGGTATC
TGGATTTTAATCACCGGTATTGTTGGTGTGATGTCGGCCAAGAAGCCTAA
ACAAACATCTATTAATGGTGTCAATATGGGATTCAATATCGTGTGTTGTG
TCGTCTCGTTTTTTGTTGGAAGATTTTTCTTAAGTGGCTTTGTTCATTAC
AAGGATTGCAATTTGTTAGATGTATATGACAACTTAAATGACACGTACGA
TTATCAGCTCTTCCGAGATTGTTACGACGATAAGAAAGTTGGTGCACCAA
TTTTTGCCACAATCATGGGTCTGATGATCCTTGAGTTTATCATTTCCATG
ACCATCTCAATCACTTGCTGCCGAAACTCAGGTTGTTGTTGTCGATCAAA
TACCTCAGGAGCATTGGTTATGAACGAGCACCCAACTCCTACTGATCTCG
TCTCACCTAATGGTGTTGTCGTTTCTGGTCAATGTCAATACCCTGGTCAA
CAAGCTTTTTACCCACCTGCTGCAGGCTACCCACCACAATCACAAGTCAT
CTACCCTGCTGGCGTCTATCCAAATCACCAACAATGTGTTACAACCACAG
CGCATATGGGAGGTGTTCAGAATCTTGCTTATTCTAACCAGATGACACAT
GCCCAACTACCTCCATATGCAAAGTAGatgtTGGTTATAATACCTATTGG
GTTGATCCGCAGTCTCTGCTGTCCAGAAAGAAGCCCTTCTTATTCCTATC
ACGGACCACCAACTGTGATAGGACCAAATGGCATGACTACTGTACCGGCT
CAAAGAACATTCAGTATGAATGTGAAATTTATCTGTGGGCTAGgGATTAC
GCAAATTGTGATCGGACTATTAACTGCTGTCTTGGCGATTGTTGCAAAAG
CAGTTTTCCATCATAATTATTCGGTGAATGAAAATTGTTCTGGCATCTGG
TTTGGTATCTGGATTTTAATCACCGGTATTGTTGGTGTGATGTCGGCCAA
GAAGCCTAAACAAACATCTATTAATGGTGTCAATATGGGATTCAATATCG
TGTGTTGTGTCGTCTCGTTTTTTGTTGGAAGATTTTTCTTAAGTGGCTTT
GTTCATTACAAGGATTGCAATTTGTTAGATGTATATGACAACTTAAATGA
CACGTACGATTATCAGCTCTTCCGAGATTGTTACGACGATAAGAAAGTTG
GTGCACCAATTTTTGCCACAATCATGGGTCTGATGATCCTTGAGTTTATC
ATTTCCATGACCATCTCAATCACTTGCTGCCGAAACTCAGGTTGTTGTTG
TCGATCAAATACCTCAGGAGCATTGGTTATGAACGAGCACCCAACTCCTA
CTGATCTCGTCTCACCTAATGGTGTTGTCGTTTCTGGTCAATGTCAATAC
CCTGGTCAACAAGCTTTTTACCCACCTGCTGCAGGCTACCCACCACAATC
ACAAGTCATCTACCCTGCTGGCGTCTATCCAAATCACCAACAATGTGTTA
CAACCACAGCGCATATGGGAGGTGTTCAGAATCTTGCTTATTCTAACCAG
ATGACACATGCCCAACTACCTCCATATGCAAAGTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00064754-exon-scaffold_423-1491911889:348525..348789 | TCONS_00064754-exon-scaffold_423-1491911889:348525..348789 | Clytia hemisphaerica | exon |
| TCONS_00064754-exon-scaffold_423-1510915933:348525..348789 | TCONS_00064754-exon-scaffold_423-1510915933:348525..348789 | Clytia hemisphaerica | exon |
| TCONS_00064754-exon-scaffold_423-1575043694:348525..348789 | TCONS_00064754-exon-scaffold_423-1575043694:348525..348789 | Clytia hemisphaerica | exon |
| TCONS_00064754-exon-scaffold_423-1491911889:351163..351421 | TCONS_00064754-exon-scaffold_423-1491911889:351163..351421 | Clytia hemisphaerica | exon |
| TCONS_00064754-exon-scaffold_423-1510915933:351163..351421 | TCONS_00064754-exon-scaffold_423-1510915933:351163..351421 | Clytia hemisphaerica | exon |
| TCONS_00064754-exon-scaffold_423-1575043694:351163..351421 | TCONS_00064754-exon-scaffold_423-1575043694:351163..351421 | Clytia hemisphaerica | exon |
| TCONS_00064754-exon-scaffold_423-1491911889:353348..353565 | TCONS_00064754-exon-scaffold_423-1491911889:353348..353565 | Clytia hemisphaerica | exon |
| TCONS_00064754-exon-scaffold_423-1510915933:353348..353565 | TCONS_00064754-exon-scaffold_423-1510915933:353348..353565 | Clytia hemisphaerica | exon |
| TCONS_00064754-exon-scaffold_423-1575043694:353348..353565 | TCONS_00064754-exon-scaffold_423-1575043694:353348..353565 | Clytia hemisphaerica | exon |
| TCONS_00064754-exon-scaffold_423-1491911889:353950..354244 | TCONS_00064754-exon-scaffold_423-1491911889:353950..354244 | Clytia hemisphaerica | exon |
| TCONS_00064754-exon-scaffold_423-1510915933:353950..354244 | TCONS_00064754-exon-scaffold_423-1510915933:353950..354244 | Clytia hemisphaerica | exon |
| TCONS_00064754-exon-scaffold_423-1575043694:353950..354244 | TCONS_00064754-exon-scaffold_423-1575043694:353950..354244 | Clytia hemisphaerica | exon |
| TCONS_00064754-exon-scaffold_423-1491911889:360694..361086 | TCONS_00064754-exon-scaffold_423-1491911889:360694..361086 | Clytia hemisphaerica | exon |
| TCONS_00064754-exon-scaffold_423-1510915933:360694..361086 | TCONS_00064754-exon-scaffold_423-1510915933:360694..361086 | Clytia hemisphaerica | exon |
| TCONS_00064754-exon-scaffold_423-1575043694:360694..361086 | TCONS_00064754-exon-scaffold_423-1575043694:360694..361086 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_423 | supercontig | scaffold_423:348525..361086 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR007237 | CD20-like |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| cellular_component |
GO:0016021 |
integral component of membrane |
Blast
The following BLAST results are available for this feature:
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