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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00064788 ID=TCONS_00064788|Name=TCONS_00064788|organism=Clytia hemisphaerica|type=transcript|length=1205bp
gcatgatggctgtatcattgtttttatgctggagtacataattattcaac
atggctgcctctttaaaaaaaggtctattcaatgTTATAATCATCATGTT
TCAGTGAAAACATTTAAGAAAGAGTTCATTTTGACGTCATCTCGTATGCG
ATGGTTTCCCTACCAAATCACTTTTTTGAGTGATGAGTGTAACTCCCCTA
CAACTAACTGGCTTAGTGCTGCTGCGTACAGAATTTTGAGAGATTTAGAA
ATGGTGGACCATTGAGTGGAGCGTAATTTTATAGAAACCGAACTTTTGTT
TAGTTGATATTGCTACGTATTTTTATTAATGGATTGTCTGGGTATTAGAG
GTTATCGGTACTGGATATGTTTGTTATCTACTCAGAACTTATAGCTACAA
ACTTAACTTGTGAATAACCTCAAATGATGACAATGTATTCACCAATCAGA
GTAAATTAGTTGTAAAATAGTCATTTGGGAGAACGCATTCGACCTATTGA
CTCAGTTCAATACATATTCAATTATACTCCAGCCATTTGGGAAGGAAAAT
TAATTATTTGCTCCGTATAATGGAAATAAAACCCTAATACTTTATAGGAT
GTCATGCTGGAAGATTTGCAGCGTTATCGCGTGCTCATTTGGGAGAATGT
TAGTGTACACAACACAACGGTTACGTAGGTGCTAAGGATAAGGTAATGTA
TCCTGTTTTTGTACTGTACTGACAATTGTAATATGCTAGAGTAATTTTTT
AGACCATCACATTCTCCATCCTAAACAATTATTATTAgcattaccgtcaa
ctgctctaaattgggacgattggtcgaaacatgggattgtttaatatctg
gcctgtattttcacttactgttaaatctctttgacaacaaaattgttttg
ataacttcaccaagtttatcaatcatatactttctgtcataacatgtcac
aataactttcactgatagcgcgccctttttaacttttttgttttcattca
aaatgactggacgcCGCTTGGAGAATTGcagaacgcccgccgcctaacaG
CCTATCGCCCAATGGGATTAATAAATAACGAGTGACGTGACGTCAAACAA
CGCTCATCGTTTTGCCACTTACTTGTTCTTCTTTGTCCAGACACTCATGT
GTGCTCCATTACGGAACAactttcatatttcgatttaaaagcctagtATT
TTTTA Run BLAST on NCBI transcript from alignment at scaffold_423:115544..116748 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00064788 ID=TCONS_00064788|Name=TCONS_00064788|organism=Clytia hemisphaerica|type=transcript|length=1205bp|location=Sequence derived from alignment at scaffold_423:115544..116748 (Clytia hemisphaerica)
TAAAAAATactaggcttttaaatcgaaatatgaaagtTGTTCCGTAATGG
AGCACACATGAGTGTCTGGACAAAGAAGAACAAGTAAGTGGCAAAACGAT
GAGCGTTGTTTGACGTCACGTCACTCGTTATTTATTAATCCCATTGGGCG
ATAGGCtgttaggcggcgggcgttctgCAATTCTCCAAGCGgcgtccagt
cattttgaatgaaaacaaaaaagttaaaaagggcgcgctatcagtgaaag
ttattgtgacatgttatgacagaaagtatatgattgataaacttggtgaa
gttatcaaaacaattttgttgtcaaagagatttaacagtaagtgaaaata
caggccagatattaaacaatcccatgtttcgaccaatcgtcccaatttag
agcagttgacggtaatgcTAATAATAATTGTTTAGGATGGAGAATGTGAT
GGTCTAAAAAATTACTCTAGCATATTACAATTGTCAGTACAGTACAAAAA
CAGGATACATTACCTTATCCTTAGCACCTACGTAACCGTTGTGTTGTGTA
CACTAACATTCTCCCAAATGAGCACGCGATAACGCTGCAAATCTTCCAGC
ATGACATCCTATAAAGTATTAGGGTTTTATTTCCATTATACGGAGCAAAT
AATTAATTTTCCTTCCCAAATGGCTGGAGTATAATTGAATATGTATTGAA
CTGAGTCAATAGGTCGAATGCGTTCTCCCAAATGACTATTTTACAACTAA
TTTACTCTGATTGGTGAATACATTGTCATCATTTGAGGTTATTCACAAGT
TAAGTTTGTAGCTATAAGTTCTGAGTAGATAACAAACATATCCAGTACCG
ATAACCTCTAATACCCAGACAATCCATTAATAAAAATACGTAGCAATATC
AACTAAACAAAAGTTCGGTTTCTATAAAATTACGCTCCACTCAATGGTCC
ACCATTTCTAAATCTCTCAAAATTCTGTACGCAGCAGCACTAAGCCAGTT
AGTTGTAGGGGAGTTACACTCATCACTCAAAAAAGTGATTTGGTAGGGAA
ACCATCGCATACGAGATGACGTCAAAATGAACTCTTTCTTAAATGTTTTC
ACTGAAACATGATGATTATAAcattgaatagacctttttttaaagaggca
gccatgttgaataattatgtactccagcataaaaacaatgatacagccat
catgc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00064788-exon-scaffold_423-1491911889:115544..116748 | TCONS_00064788-exon-scaffold_423-1491911889:115544..116748 | Clytia hemisphaerica | exon |
| TCONS_00064788-exon-scaffold_423-1510915933:115544..116748 | TCONS_00064788-exon-scaffold_423-1510915933:115544..116748 | Clytia hemisphaerica | exon |
| TCONS_00064788-exon-scaffold_423-1575043694:115544..116748 | TCONS_00064788-exon-scaffold_423-1575043694:115544..116748 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_423 | supercontig | scaffold_423:115544..116748 . |
Blast
The following BLAST results are available for this feature:
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