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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00064862 ID=TCONS_00064862|Name=TCONS_00064862|organism=Clytia hemisphaerica|type=transcript|length=1642bp
gttcATTCTATTTAGTTTGCCCTGGAGAGCTTTGTTGGAGAGATTACAGA
AACTACGATGGAGCTATGTGGTATAATTAGGTTATAAGTTGCgaatttta
tttacttttccgTCATTTATCGTGTGATCAAAGGCTTTAATTTGTTTTCT
TAATCTGGGACTTTTTGACACAAGACCTTACTTGCAGTACTAGAGTGGTA
TTGGTGCGTCTGATTAACTAAAGTCAGAAAAAGTGATCCCAGCTAACTTC
GAGAGCAGAAAATTTGTGAAGAAGGACTACATAAATAAGAAGAAATGGGG
AGAAGTTTacaacaacagaaattcaaCCATTTCGTTTCTCGTTTTCTTTC
AGCATGCGAACCGAAGGACGCTTTATCGTGGAACGGGAAAACGAAAGACG
GAACGCGAAATTTCTCGACGGATGACGGATACGTTGACGTCGATATTCCA
TCAGATGACGAATATGAGAGCGAAAATGAACTGAATTTCTCGTTAATCGA
CCCGAATATATTACGAGCGAGAATTATTCGTCATTTACCGAGTGAAGTAA
CGACAAAGTACGGTTCACCGATCGTTTTAACTTGTTTAACGACTGTTTTA
TTTCCCGTTGATATCGAATGGACTCTAAACGGGACCATTATTGAACCGAC
GATCGATGGTCGGATATATTTTTCCGACGACCGACGACAATtattcattt
tgtatttaaCGACTGATGAACAAGGAACAATAGAAATGGTCGCTAGAAAT
CGTTTCGGAAGCGAGAAGTCAATTTGTCAATTGAAAGTGCAGAACAGGAC
TAGAGCGGTCACTGAACCTCTATTAAGCCTTCCGAACACTCTGGAACTGA
GATgatcattttattatttaacATACAAACCTTTTTGTCTTTTATCGTTA
GGTTTCCAAGGCAAAGTTTCCTAAATTTAGATATGGTAATTCCCTTACTA
AATCAAACACATCCATCATTAAGTATTCTACTGGTGAAAAGGAACTGGGT
TTGAGATTACCAGGGTTTGAGATATCAAAAGTCTGAATATCATTTTCTTG
ATGCGCTAACTGATACAAGGCTTTGGCATTATCACTCAATTTCATGGTGC
TGCATTCAATTCATCTTGAAGCCAGTCTCTCTCGACGAGAGAATGTTTTA
TAGCAAGTGAGTTTGTTTGAATTTCTCCGCTCTCTGTCTGATATAGTTTT
AATTTCTTTACTTTCCAACTCAACCTTAAATCCTAAGGTGTTGAGCAACC
AAACAACCTCTAAACTTATTAGGACTGCAATTTGAAAATAAGGTTCAAAC
CAAGGTTAACATAAGTATACATCAGAGCTGTGTTCGTTTTCTAAAAGTAA
CAACCTCctgaatttttaatttattttttataaatttgtacATAATATCA
CTAatgtatctattttttttttaatttactaAAACTGAAAGTTAAATGAT
CTTTAAAGAACTGGAAAAATTTCTCAATGTGACATGACACCTCTGTCCCA
AAGGCCCAATGGAACCTTTTCcctcaatggggatgaaattttgaaatccc
aatggggataaaaattctactGATTGAAGTCAAAAACTCTGGTGTCAATG
GCTTTGGAGTACACAATTCTTCCTTCCTATTTAAAATGCGTC Run BLAST on NCBI transcript from alignment at scaffold_425:375474..377115+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00064862 ID=TCONS_00064862|Name=TCONS_00064862|organism=Clytia hemisphaerica|type=transcript|length=1642bp|location=Sequence derived from alignment at scaffold_425:375474..377115+ (Clytia hemisphaerica)
gttcATTCTATTTAGTTTGCCCTGGAGAGCTTTGTTGGAGAGATTACAGA
AACTACGATGGAGCTATGTGGTATAATTAGGTTATAAGTTGCgaatttta
tttacttttccgTCATTTATCGTGTGATCAAAGGCTTTAATTTGTTTTCT
TAATCTGGGACTTTTTGACACAAGACCTTACTTGCAGTACTAGAGTGGTA
TTGGTGCGTCTGATTAACTAAAGTCAGAAAAAGTGATCCCAGCTAACTTC
GAGAGCAGAAAATTTGTGAAGAAGGACTACATAAATAAGAAGAAATGGGG
AGAAGTTTacaacaacagaaattcaaCCATTTCGTTTCTCGTTTTCTTTC
AGCATGCGAACCGAAGGACGCTTTATCGTGGAACGGGAAAACGAAAGACG
GAACGCGAAATTTCTCGACGGATGACGGATACGTTGACGTCGATATTCCA
TCAGATGACGAATATGAGAGCGAAAATGAACTGAATTTCTCGTTAATCGA
CCCGAATATATTACGAGCGAGAATTATTCGTCATTTACCGAGTGAAGTAA
CGACAAAGTACGGTTCACCGATCGTTTTAACTTGTTTAACGACTGTTTTA
TTTCCCGTTGATATCGAATGGACTCTAAACGGGACCATTATTGAACCGAC
GATCGATGGTCGGATATATTTTTCCGACGACCGACGACAATtattcattt
tgtatttaaCGACTGATGAACAAGGAACAATAGAAATGGTCGCTAGAAAT
CGTTTCGGAAGCGAGAAGTCAATTTGTCAATTGAAAGTGCAGAACAGGAC
TAGAGCGGTCACTGAACCTCTATTAAGCCTTCCGAACACTCTGGAACTGA
GATgatcattttattatttaacATACAAACCTTTTTGTCTTTTATCGTTA
GGTTTCCAAGGCAAAGTTTCCTAAATTTAGATATGGTAATTCCCTTACTA
AATCAAACACATCCATCATTAAGTATTCTACTGGTGAAAAGGAACTGGGT
TTGAGATTACCAGGGTTTGAGATATCAAAAGTCTGAATATCATTTTCTTG
ATGCGCTAACTGATACAAGGCTTTGGCATTATCACTCAATTTCATGGTGC
TGCATTCAATTCATCTTGAAGCCAGTCTCTCTCGACGAGAGAATGTTTTA
TAGCAAGTGAGTTTGTTTGAATTTCTCCGCTCTCTGTCTGATATAGTTTT
AATTTCTTTACTTTCCAACTCAACCTTAAATCCTAAGGTGTTGAGCAACC
AAACAACCTCTAAACTTATTAGGACTGCAATTTGAAAATAAGGTTCAAAC
CAAGGTTAACATAAGTATACATCAGAGCTGTGTTCGTTTTCTAAAAGTAA
CAACCTCctgaatttttaatttattttttataaatttgtacATAATATCA
CTAatgtatctattttttttttaatttactaAAACTGAAAGTTAAATGAT
CTTTAAAGAACTGGAAAAATTTCTCAATGTGACATGACACCTCTGTCCCA
AAGGCCCAATGGAACCTTTTCcctcaatggggatgaaattttgaaatccc
aatggggataaaaattctactGATTGAAGTCAAAAACTCTGGTGTCAATG
GCTTTGGAGTACACAATTCTTCCTTCCTATTTAAAATGCGTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00064862-exon-scaffold_425-1491911889:375474..377115 | TCONS_00064862-exon-scaffold_425-1491911889:375474..377115 | Clytia hemisphaerica | exon |
| TCONS_00064862-exon-scaffold_425-1510915933:375474..377115 | TCONS_00064862-exon-scaffold_425-1510915933:375474..377115 | Clytia hemisphaerica | exon |
| TCONS_00064862-exon-scaffold_425-1575043694:375474..377115 | TCONS_00064862-exon-scaffold_425-1575043694:375474..377115 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_425 | supercontig | scaffold_425:375474..377115 + |
Blast
The following BLAST results are available for this feature:
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