TCONS_00065016 (transcript) - C. hemisphaerica

Overview
NameTCONS_00065016
Unique NameTCONS_00065016
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length952

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00065016 ID=TCONS_00065016|Name=TCONS_00065016|organism=Clytia hemisphaerica|type=transcript|length=952bp
gaCGAATTTTCGAGGATAGCTAGAGACATTGTGAATGCTATACCAAGCtt
gaaaatcttcaaagaaaaaaaTTTACTTGACAACCTTCGGAAAGAGCTTC
AGGAAATACACCAAACAAAATACGAACTGAAGATTATTCCGAAATTCGAC
ACAGAATTCTCTCAAAATACAAATGAAGACTTAGTTCCAGCATCAAAGAA
ACATTGTAGTTTTGAAGAAATGGAAGAAGTCGACCCTAATATTCCACCGG
AGACGGAAAAGGTAATGATAATAACAGCCAATCAATATGAAGAAAAGCCA
CCTTCGATCAAACGTATCACGGAACAAGAAACCCATTTCACCGCCCACCA
CGCCCATATTCATCAACAACAGCTTGATTTCAACCAACAGATATTACCAA
GCGTTTTCCCTGAGCCAATGGAGGTAACAAGTCAAGAAACAAACAGCCGA
CCACAATTCTTCTTTACTAACGAACAATTGAACAGCCACGAACCAATCAA
CACCAATTTCTTCGCCCAACGTCAGACCACATCTTCTTTAGAAGAAGAAC
GACGAAATTACACCGACAAATGGACGGCGTCCACGTTGCTACAGCAACCG
ATAAGTTCATTACGATGTAATCGACGTCGATCGAGTCGACAGACTTTCGA
AGAAACCGATTCAAATCGATCCCAAACCGATTTACTCGATTTTATCGATA
ACATACCGATCGATGATTTAGAAAGAAAGCTATTAAATCGCGGTAGTGTC
CATGAACAGAGAGCGGTCGCCTTGTCGCCACCTGGTAGGCTACCTGCTAC
CGTCAGTAGACATCATATAGCTTCCTTGGAAAGACCAAAAGTCGGTAGCC
CATCTCCTCCAAAAATGTACCGTATGAATATGTTTTAAGTAGTTGGATCG
ACGCATGCGCGCTTTGGTTATTTGTCAGCTCTTTGGTAAAAGAAACAGGC
GC
Run BLAST on NCBI

protein sequence of TCONS_00065016-protein

>TCONS_00065016-protein ID=TCONS_00065016-protein|Name=TCONS_00065016-protein|organism=Clytia hemisphaerica|type=polypeptide|length=295bp
DEFSRIARDIVNAIPSLKIFKEKNLLDNLRKELQEIHQTKYELKIIPKFD
TEFSQNTNEDLVPASKKHCSFEEMEEVDPNIPPETEKVMIITANQYEEKP
PSIKRITEQETHFTAHHAHIHQQQLDFNQQILPSVFPEPMEVTSQETNSR
PQFFFTNEQLNSHEPINTNFFAQRQTTSSLEEERRNYTDKWTASTLLQQP
ISSLRCNRRRSSRQTFEETDSNRSQTDLLDFIDNIPIDDLERKLLNRGSV
HEQRAVALSPPGRLPATVSRHHIASLERPKVGSPSPPKMYRMNMF
Run BLAST on NCBI

transcript from alignment at scaffold_428:384045..394345+

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00065016 ID=TCONS_00065016|Name=TCONS_00065016|organism=Clytia hemisphaerica|type=transcript|length=10301bp|location=Sequence derived from alignment at scaffold_428:384045..394345+ (Clytia hemisphaerica)
gaCGAATTTTCGAGGATAGCTAGAGACATTGTGAATGCTATACCAAGCtt
gaaaatcttcaaagaaaaaagtaagcTTTTATGTATTTGTATGAAACCAG
CCATATTACGCACACTGATACGTACCAGTAGCAGAAACGTGCAAATTATT
CTCGTTTCCAGATCAGAATTTTATATcacaaaatttgaaacaaaaattcc
TACCACAAAATTGAAAAGAAGGACTTGGTGCTATTGaaactttctgaact
ttgaagGGAAATTCCCTCTTCGAGGGTTTCTTCACACCCCCTTCTTACAG
ACcgccttctcacagacccactgggaccccttttcacagaaaattggcca
aaatatcgttcccgTAGGAagattatactctaatttttgtccctactgaa
aataatcagttaAGAAAATCCTCACTTCAAAGTATTGTACtcttttttcc
atccccactgagttttctgacttgaaaacaaaagaatatgaATCCCCAGT
CATAAACATTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTCCAAG
ATTTTTCGGTGTAGCTCTTGAtcgatggaacagcaatttatGCATTGGTA
TTTTCGATAGCCTTTATTCAGGAACATTTGTATTTGGTAAGATGGAAGTC
CTGTGCATGCATAATGCAGGGTTCGTTGACATTTATGACATTCTAATCTC
ATTTTGTCGTCATCTTTTATGCAATTTTGTTCTGTACATCgatttgcaac
attttcgatttCATCTCTTGTTGAAATTCTGCTAGGCGATaccgtttttt
gttgaaatttggtcgtttttttcatgtttttgtattttattatgGGAATa
taaatccccatcgagttttagtccgttattttcatccccactggctgaaa
aaatcctaccgggtctgtgagaaggatgTGTTTCTTTAGCTATGAAACTA
TTGACGAAAAAGGGAATTTTTAGAGTGGACATTGTTGAGTTTTCTAGCTC
TAGATTGGCTGGGGCTGTAACAGTACTTCAGGACATCATATCTTGCCGCC
GTTCGTGCAAAATAGGTAGATTAGGTAGATTAACACGAAGCCAAAGGTTT
TCTTGAACGCATCATGACTAAAAATGAATAAGAAGAAATTGACACTTACT
AAAAACACTGTGGCTGAACACACAAGTACACGTCAACAGATACTCTCAAC
TAAACACTCACAGCTACATCATATAAATTTGTAACACATAAGACAAACCT
CAAGGGACGAACACGTAACAATACAcacaatacaatacaatacgATACAA
TAAACAGCTCCCTAGACACATAATATACGCAATACACGTGAGACTATAAT
ACAAAATAATAATTAGGCAATTATGGATTTATAATTAAGGAGGCCTTCCA
GTGTAAATGCGTCCATAAAGTCCCATCAAATGATAAACTAAATACAATAA
AGATAATGAAAACAAACGTAAAAACAAAACGACAAATTATCTGCACTTCG
GTAGTTACATCATACGCAACCAAATAAGTAGTTTGTAATTTCTGACAGAA
ATCATAGAAATGGAATAGAAAAAGTGCTTCTCTGATTACCCGAAATGTTC
TGATCGTGTCTATTGAAAACtcctttgttttagctttaatttggtcgtta
caaaaagttcagaaaaaaagGACTTGCCATGCAAAGAGGGCTGGTTTCTA
TATGCTGTGTTTATAAAAGTGGttttatgtttttcgtttttgatacatta
ctttttaaactttcagtatCCAGTAACAAATTTTATACTTActtgtagtc
tgaaaaattctcatcacaatgataccaaattatttctaaaaaatttgata
gagattcatcaaagacagatttgatttcttattttcgtgCACTTTAGCTT
TTAATCTAATTATGCGGTCATGATGCCGTTATATCATTAGAATCGCTAGA
AAATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
TTTAGCTTTTAATCTAATTATGCGGTCATGATGCCGTTATATCATTAGAA
TCGCtagaaaattctgagcaagaaaatataggtatcttttggtataaaag
aggtttccccaaaatataagcccctaaagtttacgcataatttgaactga
aacaaaagaatttcgccATACCACGCTAATGAtacaacttttttaaagca
acaacaaaagaaatccattagCTCGAAACAAACCCTCTCAAGGGCAaagg
acctggtatatgacgagccgtttgtcTATTGTTctgaagaagctgttttt
ccatctctttacattcctctgctgAATTATCAGTCaccattttatgactt
tttagaTTTACTTGACAACCTTCGGAAAGAGCTTCAGGAAATACACCAAA
CAAAATAGTAAGCAATTTCATTAGATATTTATCTGTCAGCCATGATAtat
ttagtttttttgttttcacaagACTTTGGCCGAGGCTCAGTTCTCGTTTT
TCATGATTTCCAGGGGCTTAAATTTTCTGAGAATATTTTGATATGCTTAC
ACTTATTGACTTacggccggtctccactttcgcgcgaaatgggcgacagt
ttttttcttaaccttatTTGCCTggagaaaacattacgtcataaaaatgt
ttcgcgcgaacaaaaaaaaagttgaaggaaattctacttttttcaaccgt
tacgtcagatttgACCAATGgacttgcttcatttttcaaccgaccaatga
tcTTACAAAAAGGTTTTCGCTCATTTCgcacgaaagtggagaccggtaTT
TAAAATGGGCTTGCAATCagtatttttttaatcatttatgAAATCTTAGA
CATGGGccattcttaatttgttctcagGTTTTGGCCAAAACAAAATGagc
ttcttataaaattgttcttataaaaaaatactattcgCTCTTTCTGATCT
GTTTTAacggctctgaccatagtgaatttttcataattgccatgtagaaa
atgtatttttctgaCAGATCTACGCAGCAAAACcatgacatgttatacat
tttctgttaggccaactattcctgaatctaaaaaagtaaaaatcacgatt
aaaaaatttgatgaaaaatgcaaagacaagtatttcaactttgaggacct
tattttcggcgaagaaaaacattttgaaaaagtttttgcgtaacttaaaa
tagattttcggaaaatttttgtagaaGCTTCTTCGTCTCAATATCTTAAA
AATagttgtttttgaccattttttcaaCCGAATTTTTCGTACAAaaagag
tcataacttttgatacatcaatttggaaaactttccgAATTTTTTTAGAT
AGTTCAATCTTTTGCagacgatttaaaaaaaattcgaagCAAAAAGGTTG
ATTAcccattttttgtaaaagagggtaacataacattttaaaataaattc
acAAACAAGTTATAAAGACAGTTTTTTTGTTAAAGGTGTCAAGGAACGCA
AAACAAAAGTCCTATCTTCAAATCTCATAACAAtttttttgactatggtc
agagcccttaagtatgACATTATGGGCAGAATAAAGTTTTTTAAGTTGac
gaaatatttattttataactttctatcaaaatataacattttctcgTTAC
AGCGAACTGAAGATTATTCCGAAATTCGACACAGAATTCTCTCAAAATAC
AAGTAAAGCTTCAAAGTTTTGTATTTAGATAAGAGAgtatattgtttgct
tactcatcaattttgatttaaaagcttaTGATATAGAATTGTCACGGAtt
tggagcaagattggtcagaaagaggaaaagaaaaacatttttttgcttat
atcagcacagtatatcaataggcagacactgtcctgatatgaaacgggaa
cactaagtaaaaataaaacctttgatATCATTATTTGTTTCAAAAAACTA
TTTTGATGCTGAATAAATACAAATTCTTCTCGAAAAAACAAGTGTAGGAG
CTCTCCTGGGAATGGCATGGAGTTCGGTATGAGTCAGCCTAAAAATACCT
TACGCCGAAAAGCAATTTCCCCTGCATATTCATTACCAGCCCCCTAAAAA
GATAAGCTAAGGGTTGATATGTTTTTTAGTCACCTTATACGTGCATGTAT
TTGTCCTCTTTCAAAGAATAAAGGANAAAGTTTTTGCGTAacttaaaata
gattttcggaaaatttttgtagaaGCTTCTTCGTCTCAATATCTTAAAAA
TagttgtttttgaccattttttcaaCCGAATTTTTCGTACAAaaagagtc
ataacttttgatacatcaatttggaaaactttccgAATTTTTTTAGATAG
TTCAATCTTTTGCagacgatttaaaaaaaattcgaagCAAAAAGGTTGAT
TAcccattttttgtaaaagagggtaacataacattttaaaataaattcac
AAACAAGTTATAAAGACAGTTTTTTTGTTAAAGGTGTCAAGGAACGCAAA
ACAAAAGTCCTATCTTCAAATCTCATAACAAtttttttgactatggtcag
agcccttaagtatgACATTATGGGCAGAATAAAGTTTTTTAAGTTGacga
aatatttattttataactttctatcaaaatataacattttctcgTTACAG
CGAACTGAAGATTATTCCGAAATTCGACACAGAATTCTCTCAAAATACAA
GTAAAGCTTCAAAGTTTTGTATTTAGATAAGAGAgtatattgtttgctta
ctcatcaattttgatttaaaagcttaTGATATAGAATTGTCACGGAtttg
gagcaagattggtcagaaagaggaaaagaaaaacatttttttgcttatat
cagcacagtatatcaataggcagacactgtcctgatatgaaacgggaaca
ctaagtaaaaataaaacctttgatATCATTATTTGTTTCAAAAAACTATT
TTGATGCTGAATAAATACAAATTCTTCTCGAAAAAACAAGTGTAGGAGCT
CTCCTGGGAATGGCATGGAGTTCGGTATGAGTCAGCCTAAAAATACCTTA
CGCCGAAAAGCAATTTCCCCTGCATATTCATTACCAGCCCCCTAAAAAGA
TAAGCTAAGGGTTGATATGTTTTTTAGTCACCTTATACGTGCATGTATTT
GTCCTCTTTCAAAGAATAAAGGAACTTTCGAATAATAGTTCGATCAAGAA
ATTTATCCTTTTACTCATATACATTATTATGACGATGGATGTTTAGTTTA
CTTTTACATTTTCAGATGAAGACTTAGTTCCAGCATCAAAGAAACATTGT
AGTTTTGAAGAAATGGAAGAAGTCGACCCTAATATTCCACCGGAGGTTTG
TaaagggctcttccagaaagttTCTGTACATGGGGAGTGGATGATAAAGT
ctccgggggtagtgaaaaatctacaaaatttgtctTGTCTGCTgggcaaa
cttgctctgtttggcggtaattttgctctgtttgaggataattttgaatg
ttccgggggtcaactgatgcttgtccgggggtcaaaactcggaggtaaat
ttccaaaaattgttATATTCTCCACCCcctatattcaaattttttctgga
aaagtccaaAGAGCTGAAATAGCCACGAATAAAAAACGGCTGGTGACTTA
CAAGGCCTACGATATTATCTGGCAATCGGATGACGGAAGGGAGAAAACAT
TGACCTCTAATATGCCTTGAAATATGCCTTATAATACCCCGCCTCGttat
tttaaaatactttcaatAGCTTTATTCCTGAGCAAAATCAGTCTAAAATT
GGGCCATTTAGGCCCATTTAGGTCCAATTTTAGACTAATTTTGCTCAGGA
ATAAAGCTATTGAAAGTGTGAATCGTGATATTTTAAACTAACGAGGCGGA
GGGGGAGACGCCCCAGTTAGCGCGAGTCCTAACTTAACTTGTAAAGCTTA
TTTAGTCCCCCCTGAAATGTTTGAATTGTTTGCATGCTATAAATCCTCGA
ATGAAAACGGTTTCTAGTATTCGAACAGTTATTGATTCAAACAGTTATTG
AAAAAAGTCGAATCCAATAAGCTTTAAAACTAGAAATTCATGACAGTAAA
TAAGTCAATCAAATGTCTTATTTAGGCGATtcggaaaaatataaaataat
tttttggcaaGAGTAGAAATCGTCTATAAGGAATAAATAACGATTTTAGT
CCAAAGTTTCTTTCTAGTAAATTAGTTAAAAGGGTTACAATAGGGTANTT
AGTCCAAAGTTTCTTTCTAGTAAATTAGTTAAAAAGGTTACAATATAGGA
TGTCAGGGGTGAAGGAACATTTGCataggagagcagatttaaaCGACATA
GTAATTATGTTTTTATACCACGAATAGGCAAGTgctttgtcataaaaatc
tgctctcctgtGCAGGTCGTtcttcacccctgtctacgctactgggtttg
aaaattgaattaaaggatttcgttttcaaaataatacACCTTTGACATTG
TAGACGGAAAAGGTAATGATAATAACAGCCAATCAATATGAAGAAAAGCC
ACCTTCGATCAAACGTATCACGGAACAAGAAACCCATTTCACCGCCCACC
ACGCCCATATTCATCAACAACAGCTTGATTTCAACCAACAGATATTACCA
AGCGTTTTCCCTGAGGTTTGTATGCGATATGCAGGCTATTAATGGATAGC
TAGATGCTTTCTAGTGTTGTATGCACTGATTTCtaactaccgggtgcgcc
acaaaaaagtttccctctttaaaactaatttttctcaaaatctaaaaatt
ttaaaagaaccttCCTAATTCatgagaaagaagaaagatcaacttaaatt
ttgatgggttatatattaaatttgattcattagatcaaaagttatgctca
attaaataaaaaagttactttctgaaagtgctcaaaaaggttaaaaatca
ACCTAACAAATTAAACGGAAGCATAATTActtgatacatcagtattttcg
ctttagtcattaaaaatgataattagctgtctaaatgatcttttgttgta
taaaggaaggtttaatttcaacaaaaggcagaaaattcgtcgaaaaaggc
caaaaatccagtaaaattcataaaaatacataaaatatgGGTTTTGCGGT
AGATCCAGTCTTACTATACTTTATCCAATCTAAAACCAAAAATGTGagga
aaatttgggtaaaagtaaataaagtgattttgattaagattttaaaccct
tttgacccttcagtttcgaaatttatgtttttaattacttaaaaatgttt
ttaattatgTAAAGGCTATCGTGATTGCCaattttgaaatggaaatttgt
taggtcgattttcaacgtttttgagcactttctgaaagtaacttttttat
tcaattgagcataaatttgatctaatgaatcaaatttaataaatgaccca
tcaaaatttaagtttacctttcttctttctaatgaAATTGGAAtggttct
ttcaaaatttttagatttctagaaaattagttttaaagagagaaacattt
tgtggcgcacccggtatttgaCTGGATCTCGCTTCCCATATAAAAGGAAA
CGTGTCCAAATTTAGAGCTGACTAGTCAgtcatcttgttttcaattctgg
tcgTGAACAGCGCGATTTGATATTTGGATATttgaacgttcgaaaatcta
gaAAACTACATTGGGCCTATACAACTGCAAAACTAGACACACTTCCACGG
GAAATCTGTGAGCAGTTAACCTATTTAGGGATATAATATCGGTGGTTttt
atgtttgttttgaaaCCTTGTCTGTTGTTGTCCTTTGTTGCACGAtgact
gttttaaatttctttaaataattCTTTAACTGTAAACAATTACTTAATCA
CCAGCATCATTTGGAGGATAGTTATCTTTATTATACGTCCCTCGAGGCTT
TTGTAATTTtctatgacgtcacatttattGTCCTTCGGGAATCAAACTTT
GATTTATAAACAGCATATTGAAACGTAGCTAATTTGATACTCGTCACTGT
TATTTATGAAGACTTATGAGAGGAACATAGTGTTTTGATGTGGAAAATTT
GATATATGTTTTGAAGATAGTTTTATAAGCCGAAGGCTTTTTTACAGACT
CAAATTCATGTTTGAACACAAATCCTTTACATTAACAATTATCATAATGT
ATAGCACCTAAACTCTCCAGAGTTCTCAATCCATATCTCAAAACTTTCAT
ATAAGAAATCgagatgaaaagattttttggcttctagcctttttgttgtt
ttatccGTTTTAGCCAATGGAGGTAACAAGTCAAGAAACAAACAGCCGAC
CACAATTCTTCTTTACTAACGAACAATTGAACAGCCACGAACCAATCAAC
ACCAATTTCTTCGCCCAACGTCAGACCACATCTTCTTTAGAAGAAGAACG
ACGAAATTACACCGACAAATGGACGGCGTCCACGTTGCTACAGCAACCGA
TAAGTTCATTACGATGTAATCGACGTCGATCGAGTCGACAGACTTTCGAA
GAAACCGATTCAAATCGATCCCAAACCGATTTACTCGATTTTATCGATAA
CATACCGATCGATGATTTAGAAAGAAAGCTATTAAATCGCGGTAGTGTCC
ATGAACAGAGAGCGGTCGCCTTGTCGCCACCTGGTAGGCTACCTGCTACC
GTCAGTAGACATCATATAGCTTCCTTGGAAAGACCAAAAGTCGGTAGCCC
ATCTCCTCCAAAAATGTACCGTATGAATATGTTTTAAGTAGTTGGATCGA
CGCATGCGCGCTTTGGTTATTTGTCAGCTCTTTGGTAAAAGAAACAGGCG
C

Coding sequence (CDS) from alignment at scaffold_428:384045..394345+

>TCONS_00065016 ID=TCONS_00065016|Name=TCONS_00065016|organism=Clytia hemisphaerica|type=CDS|length=5328bp|location=Sequence derived from alignment at scaffold_428:384045..394345+ (Clytia hemisphaerica)
gaCGAATTTTCGAGGATAGCTAGAGACATTGTGAATGCTATACCAAGCtt
gaaaatcttcaaagaaaaaaaTTTACTTGACAACCTTCGGAAAGAGCTTC
AGGAAATACACCAAACAAAATACGAACTGAAGATTATTCCGAAATTCGAC
ACAGAATTCTCTCAAAATACAAATGAAGACTTAGTTCCAGCATCAAAGAA
ACATTGTAGTTTTGAAGAAATGGAAGAAGTCGACCCTAATATTCCACCGG
AGACGGAAAAGGTAATGATAATAACAGCCAATCAATATGAAGAAAAGCCA
CCTTCGATCAAACGTATCACGGAACAAGAAACCCATTTCACCGCCCACCA
CGCCCATATTCATCAACAACAGCTTGATTTCAACCAACAGATATTACCAA
GCGTTTTCCCTGAGCCAATGGAGGTAACAAGTCAAGAAACAAACAGCCGA
CCACAATTCTTCTTTACTAACGAACAATTGAACAGCCACGAACCAATCAA
CACCAATTTCTTCGCCCAACGTCAGACCACATCTTCTTTAGAAGAAGAAC
GACGAAATTACACCGACAAATGGACGGCGTCCACGTTGCTACAGCAACCG
ATAAGTTCATTACGATGTAATCGACGTCGATCGAGTCGACAGACTTTCGA
AGAAACCGATTCAAATCGATCCCAAACCGATTTACTCGATTTTATCGATA
ACATACCGATCGATGATTTAGAAAGAAAGCTATTAAATCGCGGTAGTGTC
CATGAACAGAGAGCGGTCGCCTTGTCGCCACCTGGTAGGCTACCTGCTAC
CGTCAGTAGACATCATATAGCTTCCTTGGAAAGACCAAAAGTCGGTAGCC
CATCTCCTCCAAAAATGTACCGTATGAATATGTTTTAAgaCGAATTTTCG
AGGATAGCTAGAGACATTGTGAATGCTATACCAAGCttgaaaatcttcaa
agaaaaaaaTTTACTTGACAACCTTCGGAAAGAGCTTCAGGAAATACACC
AAACAAAATACGAACTGAAGATTATTCCGAAATTCGACACAGAATTCTCT
CAAAATACAAATGAAGACTTAGTTCCAGCATCAAAGAAACATTGTAGTTT
TGAAGAAATGGAAGAAGTCGACCCTAATATTCCACCGGAGACGGAAAAGG
TAATGATAATAACAGCCAATCAATATGAAGAAAAGCCACCTTCGATCAAA
CGTATCACGGAACAAGAAACCCATTTCACCGCCCACCACGCCCATATTCA
TCAACAACAGCTTGATTTCAACCAACAGATATTACCAAGCGTTTTCCCTG
AGCCAATGGAGGTAACAAGTCAAGAAACAAACAGCCGACCACAATTCTTC
TTTACTAACGAACAATTGAACAGCCACGAACCAATCAACACCAATTTCTT
CGCCCAACGTCAGACCACATCTTCTTTAGAAGAAGAACGACGAAATTACA
CCGACAAATGGACGGCGTCCACGTTGCTACAGCAACCGATAAGTTCATTA
CGATGTAATCGACGTCGATCGAGTCGACAGACTTTCGAAGAAACCGATTC
AAATCGATCCCAAACCGATTTACTCGATTTTATCGATAACATACCGATCG
ATGATTTAGAAAGAAAGCTATTAAATCGCGGTAGTGTCCATGAACAGAGA
GCGGTCGCCTTGTCGCCACCTGGTAGGCTACCTGCTACCGTCAGTAGACA
TCATATAGCTTCCTTGGAAAGACCAAAAGTCGGTAGCCCATCTCCTCCAA
AAATGTACCGTATGAATATGTTTTAAgaCGAATTTTCGAGGATAGCTAGA
GACATTGTGAATGCTATACCAAGCttgaaaatcttcaaagaaaaaaaTTT
ACTTGACAACCTTCGGAAAGAGCTTCAGGAAATACACCAAACAAAATACG
AACTGAAGATTATTCCGAAATTCGACACAGAATTCTCTCAAAATACAAAT
GAAGACTTAGTTCCAGCATCAAAGAAACATTGTAGTTTTGAAGAAATGGA
AGAAGTCGACCCTAATATTCCACCGGAGACGGAAAAGGTAATGATAATAA
CAGCCAATCAATATGAAGAAAAGCCACCTTCGATCAAACGTATCACGGAA
CAAGAAACCCATTTCACCGCCCACCACGCCCATATTCATCAACAACAGCT
TGATTTCAACCAACAGATATTACCAAGCGTTTTCCCTGAGCCAATGGAGG
TAACAAGTCAAGAAACAAACAGCCGACCACAATTCTTCTTTACTAACGAA
CAATTGAACAGCCACGAACCAATCAACACCAATTTCTTCGCCCAACGTCA
GACCACATCTTCTTTAGAAGAAGAACGACGAAATTACACCGACAAATGGA
CGGCGTCCACGTTGCTACAGCAACCGATAAGTTCATTACGATGTAATCGA
CGTCGATCGAGTCGACAGACTTTCGAAGAAACCGATTCAAATCGATCCCA
AACCGATTTACTCGATTTTATCGATAACATACCGATCGATGATTTAGAAA
GAAAGCTATTAAATCGCGGTAGTGTCCATGAACAGAGAGCGGTCGCCTTG
TCGCCACCTGGTAGGCTACCTGCTACCGTCAGTAGACATCATATAGCTTC
CTTGGAAAGACCAAAAGTCGGTAGCCCATCTCCTCCAAAAATGTACCGTA
TGAATATGTTTTAAgaCGAATTTTCGAGGATAGCTAGAGACATTGTGAAT
GCTATACCAAGCttgaaaatcttcaaagaaaaaaaTTTACTTGACAACCT
TCGGAAAGAGCTTCAGGAAATACACCAAACAAAATACGAACTGAAGATTA
TTCCGAAATTCGACACAGAATTCTCTCAAAATACAAATGAAGACTTAGTT
CCAGCATCAAAGAAACATTGTAGTTTTGAAGAAATGGAAGAAGTCGACCC
TAATATTCCACCGGAGACGGAAAAGGTAATGATAATAACAGCCAATCAAT
ATGAAGAAAAGCCACCTTCGATCAAACGTATCACGGAACAAGAAACCCAT
TTCACCGCCCACCACGCCCATATTCATCAACAACAGCTTGATTTCAACCA
ACAGATATTACCAAGCGTTTTCCCTGAGCCAATGGAGGTAACAAGTCAAG
AAACAAACAGCCGACCACAATTCTTCTTTACTAACGAACAATTGAACAGC
CACGAACCAATCAACACCAATTTCTTCGCCCAACGTCAGACCACATCTTC
TTTAGAAGAAGAACGACGAAATTACACCGACAAATGGACGGCGTCCACGT
TGCTACAGCAACCGATAAGTTCATTACGATGTAATCGACGTCGATCGAGT
CGACAGACTTTCGAAGAAACCGATTCAAATCGATCCCAAACCGATTTACT
CGATTTTATCGATAACATACCGATCGATGATTTAGAAAGAAAGCTATTAA
ATCGCGGTAGTGTCCATGAACAGAGAGCGGTCGCCTTGTCGCCACCTGGT
AGGCTACCTGCTACCGTCAGTAGACATCATATAGCTTCCTTGGAAAGACC
AAAAGTCGGTAGCCCATCTCCTCCAAAAATGTACCGTATGAATATGTTTT
AAgaCGAATTTTCGAGGATAGCTAGAGACATTGTGAATGCTATACCAAGC
ttgaaaatcttcaaagaaaaaaaTTTACTTGACAACCTTCGGAAAGAGCT
TCAGGAAATACACCAAACAAAATACGAACTGAAGATTATTCCGAAATTCG
ACACAGAATTCTCTCAAAATACAAATGAAGACTTAGTTCCAGCATCAAAG
AAACATTGTAGTTTTGAAGAAATGGAAGAAGTCGACCCTAATATTCCACC
GGAGACGGAAAAGGTAATGATAATAACAGCCAATCAATATGAAGAAAAGC
CACCTTCGATCAAACGTATCACGGAACAAGAAACCCATTTCACCGCCCAC
CACGCCCATATTCATCAACAACAGCTTGATTTCAACCAACAGATATTACC
AAGCGTTTTCCCTGAGCCAATGGAGGTAACAAGTCAAGAAACAAACAGCC
GACCACAATTCTTCTTTACTAACGAACAATTGAACAGCCACGAACCAATC
AACACCAATTTCTTCGCCCAACGTCAGACCACATCTTCTTTAGAAGAAGA
ACGACGAAATTACACCGACAAATGGACGGCGTCCACGTTGCTACAGCAAC
CGATAAGTTCATTACGATGTAATCGACGTCGATCGAGTCGACAGACTTTC
GAAGAAACCGATTCAAATCGATCCCAAACCGATTTACTCGATTTTATCGA
TAACATACCGATCGATGATTTAGAAAGAAAGCTATTAAATCGCGGTAGTG
TCCATGAACAGAGAGCGGTCGCCTTGTCGCCACCTGGTAGGCTACCTGCT
ACCGTCAGTAGACATCATATAGCTTCCTTGGAAAGACCAAAAGTCGGTAG
CCCATCTCCTCCAAAAATGTACCGTATGAATATGTTTTAAgaCGAATTTT
CGAGGATAGCTAGAGACATTGTGAATGCTATACCAAGCttgaaaatcttc
aaagaaaaaaaTTTACTTGACAACCTTCGGAAAGAGCTTCAGGAAATACA
CCAAACAAAATACGAACTGAAGATTATTCCGAAATTCGACACAGAATTCT
CTCAAAATACAAATGAAGACTTAGTTCCAGCATCAAAGAAACATTGTAGT
TTTGAAGAAATGGAAGAAGTCGACCCTAATATTCCACCGGAGACGGAAAA
GGTAATGATAATAACAGCCAATCAATATGAAGAAAAGCCACCTTCGATCA
AACGTATCACGGAACAAGAAACCCATTTCACCGCCCACCACGCCCATATT
CATCAACAACAGCTTGATTTCAACCAACAGATATTACCAAGCGTTTTCCC
TGAGCCAATGGAGGTAACAAGTCAAGAAACAAACAGCCGACCACAATTCT
TCTTTACTAACGAACAATTGAACAGCCACGAACCAATCAACACCAATTTC
TTCGCCCAACGTCAGACCACATCTTCTTTAGAAGAAGAACGACGAAATTA
CACCGACAAATGGACGGCGTCCACGTTGCTACAGCAACCGATAAGTTCAT
TACGATGTAATCGACGTCGATCGAGTCGACAGACTTTCGAAGAAACCGAT
TCAAATCGATCCCAAACCGATTTACTCGATTTTATCGATAACATACCGAT
CGATGATTTAGAAAGAAAGCTATTAAATCGCGGTAGTGTCCATGAACAGA
GAGCGGTCGCCTTGTCGCCACCTGGTAGGCTACCTGCTACCGTCAGTAGA
CATCATATAGCTTCCTTGGAAAGACCAAAAGTCGGTAGCCCATCTCCTCC
AAAAATGTACCGTATGAATATGTTTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040762XLOC_040762Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065016-proteinTCONS_00065016-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065016-exon-scaffold_428-1491911889:384045..384114TCONS_00065016-exon-scaffold_428-1491911889:384045..384114Clytia hemisphaericaexon
TCONS_00065016-exon-scaffold_428-1510915933:384045..384114TCONS_00065016-exon-scaffold_428-1510915933:384045..384114Clytia hemisphaericaexon
TCONS_00065016-exon-scaffold_428-1575043694:384045..384114TCONS_00065016-exon-scaffold_428-1575043694:384045..384114Clytia hemisphaericaexon
TCONS_00065016-exon-scaffold_428-1491911889:387850..387901TCONS_00065016-exon-scaffold_428-1491911889:387850..387901Clytia hemisphaericaexon
TCONS_00065016-exon-scaffold_428-1510915933:387850..387901TCONS_00065016-exon-scaffold_428-1510915933:387850..387901Clytia hemisphaericaexon
TCONS_00065016-exon-scaffold_428-1575043694:387850..387901TCONS_00065016-exon-scaffold_428-1575043694:387850..387901Clytia hemisphaericaexon
TCONS_00065016-exon-scaffold_428-1491911889:389147..389196TCONS_00065016-exon-scaffold_428-1491911889:389147..389196Clytia hemisphaericaexon
TCONS_00065016-exon-scaffold_428-1510915933:389147..389196TCONS_00065016-exon-scaffold_428-1510915933:389147..389196Clytia hemisphaericaexon
TCONS_00065016-exon-scaffold_428-1575043694:389147..389196TCONS_00065016-exon-scaffold_428-1575043694:389147..389196Clytia hemisphaericaexon
TCONS_00065016-exon-scaffold_428-1491911889:390760..390839TCONS_00065016-exon-scaffold_428-1491911889:390760..390839Clytia hemisphaericaexon
TCONS_00065016-exon-scaffold_428-1510915933:390760..390839TCONS_00065016-exon-scaffold_428-1510915933:390760..390839Clytia hemisphaericaexon
TCONS_00065016-exon-scaffold_428-1575043694:390760..390839TCONS_00065016-exon-scaffold_428-1575043694:390760..390839Clytia hemisphaericaexon
TCONS_00065016-exon-scaffold_428-1491911889:391998..392159TCONS_00065016-exon-scaffold_428-1491911889:391998..392159Clytia hemisphaericaexon
TCONS_00065016-exon-scaffold_428-1510915933:391998..392159TCONS_00065016-exon-scaffold_428-1510915933:391998..392159Clytia hemisphaericaexon
TCONS_00065016-exon-scaffold_428-1575043694:391998..392159TCONS_00065016-exon-scaffold_428-1575043694:391998..392159Clytia hemisphaericaexon
TCONS_00065016-exon-scaffold_428-1491911889:393808..394345TCONS_00065016-exon-scaffold_428-1491911889:393808..394345Clytia hemisphaericaexon
TCONS_00065016-exon-scaffold_428-1510915933:393808..394345TCONS_00065016-exon-scaffold_428-1510915933:393808..394345Clytia hemisphaericaexon
TCONS_00065016-exon-scaffold_428-1575043694:393808..394345TCONS_00065016-exon-scaffold_428-1575043694:393808..394345Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_428supercontigscaffold_428:384045..394345 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.53344	0.0133035	0.00546031	0.0140455	0.0225763	0.0106864	0.0177079	0.0132693	0.804749	0.00933149	0.0104916	0.00251071	0.00352017	0.00254209	2.71119	0.00502049	0.00718234	0.00366736	0.00415656	0.00280529	0.00286982	0.00428314	0.00938057	0.00628756	0.0332528	0.0365479	0.00817149	1.67701	0.00327351	0.0118542
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00065016 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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