TCONS_00065021 (transcript) - C. hemisphaerica

Overview
NameTCONS_00065021
Unique NameTCONS_00065021
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length815

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00065021 ID=TCONS_00065021|Name=TCONS_00065021|organism=Clytia hemisphaerica|type=transcript|length=815bp
ATTGAAATGAGGAAAGTTCTACAGTATGCTTCTCCTTAGAAACTGCTTGG
CACTGGTGGATTTCGGTGGATTTCATCTATGAACCGTTTATTGTTCAACA
AAGCTGGTAAAATGGATTTCAGAAGCCGGTGTTCCTGCGAAAAGTTGTGG
GACGTTATCATGACCACTTGCTGACCTTATAATTGATGCTTGTGATCCTA
ATTCGTCATCGCTCACGTCAGGCGAAAGAATTGTACGGGGAGCTGTAAAC
TCAGGTATATGAAATATCTGCCAGGGATGATGGAAGCAATGTTGTTGGAA
TCAAGTTCTATCTGTCCAAGAACGATACCAGAGTTTACAAAGACTTTGAA
GATCATTGTCGGCCATGATTCGATAGCACTACTATCCACAAAACGTCTTT
TATCCCATGTTGGACAATGACTTTGCACATTCGAATATAAAAGATCCATT
GGAAAGCAACTTGGTGTTACAGCTACATCAAAGGTAATGTTTTTAGTTGT
ACAGTTATTTCTTGCTTCAACTGttaatgaatatttttcaatcgtgTCTG
CTTTGATCGGAATAATATTGCTTAAAATGACTCCTTTGGATTTGTCGATG
CAGAAATGGGTAGAAATTTCTTTCGGCTCACATGGTATACCTTTTGGTCC
ATTTCTCGATAATAACatctttttcaaagcttcttGGACCAGGTTTTGGC
TTGTGTTATTATATTTCCAATTTCCGATTCTGTCAACCTTGCGAGATatg
aaatttgaataaaattatcGTATTTATAGCCAGTTTAAACTGGCTCGGTT
TCGACTAAAACGCGG
Run BLAST on NCBI

transcript from alignment at scaffold_428:422877..440610+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00065021 ID=TCONS_00065021|Name=TCONS_00065021|organism=Clytia hemisphaerica|type=transcript|length=17734bp|location=Sequence derived from alignment at scaffold_428:422877..440610+ (Clytia hemisphaerica)
ATTGAAATGAGGAAAGTTCTACAGTATGCTTCTCCTTAGAAACTGCTTGG CACTGGTGGATTTCGGTGGATTTCATCTATGGTAAGTCATTGatgctttg tttttttcattttctaattgaACCTATTACTTCCGGTATAATCTATAAAA ACTTTTGATATTAAGGCCAACCCAGTGAGTATTCTAAACAATACCATCAA CAGTCTTTGCATAAACCTTATtctcatcaaaaaaatcttttatcgTAGTA TATGGCCAACCCTTAAGATCTGTACTATATTTCGTGGGATGCAACTGCAT GATGTCACCTGACGTAATTAGCATTGCCTGTGACGTCAGTTTTTCACAAT ATAAACTTTTGCTATGCCCAATTCGCGGGGtccctctcaaaaaagttaac accctatctactttcgaaccaatcacatgcaGTTGCGTCCCACGAAAGAT TCTACATATCCTAAGGGTTGGCCCTATAATGCTAACCCCTAATATAGGCT AAAAATTAACGATTTTTTAAACCTATAAAAAAACGGGCCGGTACAATCGA TTCCCCGAATAAATTCAACGAAAATGAGTGATACATAGGATAGAGTATTG AATTCTGAGCAAATAAGGTGTACGACTATACTTCAATATTCTGCCAAATT TAGTGCGATTAACGTTTTTGTCTAAAACGAAGCATATTTAATAGTGTTTG GAGCTTTAAATGGTCTACAAATTCTACATAGTCTCTAGCCTTCGGTAATA CCACTCATGTACCTTTGATTATTTAAGATGTCTAAAAATACTATTCCGAC CTTTATTAGCCTTTCAAAAGCCCTAAAAGTGTGACAGTCCAAAGTACAAA ATATTGACACTtacacagatttctgtaaagcccgaagggctagatgtcat gctttaagctcttccaagcaaaaaaaaagtgaatattggaacaaatattg ctgctattatTTTCGaaacctgcgaagcttcttattggtcaagcgctgaa attctattgtaatgccACGTGAtataggtaggatttcctacctaacctcg acACACTTTCCACTAAAGCACAACATCTagccttcgggctttataaatct atggacaCCTACCCGTCATTCATCAAACTTAGTACTCCTAACTCACCAGA AAAGGAAAgtcagaaaaataattttataagaaatacGGTAAATACATTTC CAAAGGGACTTTTAGTATAGCCTGTTAAACGAAAATGGCTTTTTTATCgc gaaacaaagaaaaaatttggtatGTGGGAAGGCACTGGCTACTTTAGTCT TCCGCCGTAAAAATTCTCGAAGCTATTTGATTGTTGAAGTTTGGTAATAG ACTTTAACCTCGTGAAATATTTCTACACTATACTCAATTTAATGTACATT AATTATAATATCCTTCCTAATATACTcaactaaagtctatttcaaattag ctggcagtgttttttcaaatcttaagaacttttgatagaattagatgaat atttttcacattttagtTGAGGTAAGATTGAAGTTTCCCGTgtaagaagt tgatttttttctttttcgtttttcttcttcattttcaatatttcatcaaa ttttttatcaaaccatCATATCCCATTCCCGATAATCTTtccaacgagca caaaatcgctacttaatccaaattctttcaaaagctattgaggtttgaaa aaacactgctagctaatttgaaatagacttcaATACGTATCAGTATACTA TACTCTTCTTACAGAACCGTTTATTGTTCAACAAAGCTGGTAAAATGGAT TTCAGAAGCCGGTGTTCCTGCGAAAAGTTGTGGGACGTTATCATGACCAC TTGCTGACCTTATAATTGATGCTTGTGATCCTAATTCGTCATCGCTCACG TCAGGCGAAAGAATTGTACGGGGAGCTGTAAACTCAGGTAAGGGTGGTGG TTCGTATTTTTCGGCTAATTTTGGAGATCTGAATTCAGGTAATGATGATG GTCCGATTTGATCTGAGTATCGGTTCGAGTTGTTAGATGGAAACGTGAAT TCGGGTAGCGGTACTGAATCTCTTTCACTTGAAAGTCGAAAGTTTTTCGA ATTTGTTGATCTGGATTTGGTGTTGTGTGATGAGTGTGATCCACTGGAAG TTAAATTATAAGCACGTCCTTTACCTGCTAAAAATCCTCTCCACGCTTCA ACTGTGCGCGTCTGTCTCAGAATGTTAAAATAGAAGATAAAAGCACCTTG TAACGAATTGAATATACAAAATAAGTATTGAAAAACAAGTCGAGTTTCTC CGACGGCGAGTAACCCGAAAATCCAAGTTAATCCGAGTAAGGTGCAACAG GAGACGGCAATTCGGAGTTGCGATGCGAGTTGTGCTTTGTCGTCCACTTT GTGTTTACTgagtttgtttttgaaaagGCGGTAGACGACAAATAAAAAGA TGATGGAGTTCAGGAAGAGGATGATGCCAACGGGAAGAAGAAGACCATAT TTAAGCGAGTTTCCATGTACCATGCAGctaagaaaaaatattatacaCAA CTTTTcataaatacaccttttcgaccgtagccgccaattgccacacgggt attttttgtccgttttaccaccctaaaaccgtcccagtctttttttcgca cctatagacaatagaaaaaagtgtaaaaaaaggattggatagAGTTTAGG CTGGTAAAACGGACAAGAAAATGCCTGAGCGGCAATTGACGCCTACgatt gaaaaggtgtatttatgaaaagttgtgttttctttttattattttaagta TAACGAcaacctcgttttgaaaccattactaTGGTGATTATATCTCTTGA GTATTTAAGTGTTACCTGTATAGATAGAGCAAACTCCCATGGGAATCAAT TGATTACCATAAtagcaattttttgaaaacgaggtaagtgtTGCTCGTGA CATAATATTATGAAACGGTCTATTTACTTAGCATATAATTTTGGTTCGTG CTCATCCCTAATTCAAATGGCATACTGGATAAGTGGGACGTTTAATTGGG ACACTAAATGGGATGTTCAGGGGGACACTAGTGGGACTTTCAGGGGGAAA CTAGTGGGATGCTAAGTAGGACGCTCAAGTGCGTGGGACGGGCGTTAGTG GGACGTTCAGGGGGCGCTAGTGGAACAATAGTGAGTGGGGCGCTCAGGAA AGCGTTTCAGggtggtgggatggagcatgttgcattgcaccaacgcaaaa aaaGTTCTCGTTTCCCCAAGCCTTTACAGTTAACACTTTCTCACTAAGAT CATGCTCTAATTCGATGCCCCTTGAAAATCGGATTAGAGGTATCGGCTTT ATGAGCCCAACATAGAATGCCTCAGATGAAAGTTTAAATGTGCTCATCTA AACCCAGCTGGAACACAACTTTATTTCGGCGTTCATCTAAAGCTCACAAC GTCtacatataacgttagatgaacgttatgtGCAAGCTGGGTATACTCAC ATTTCTAGATCTTGGTAATCATTCTTGTCAGCCAATAAACAAACGGTAAC AACAAATAGTGGCACCCctagaagaaaaatattttcgttagaaataaata aactttaAGGctgaatgataaaaaaatccCTTGTTAGTATAGGCTACTTG TATCCCAGGTTTTATTTACGTAACTGGTATGGAAGTCAGAAAATTATTAA TTTAAGTGGATCGATTTACACGAGGATTTTATTTCGCGAGTTTCGTgagc tttttcaaaaaattgcgaaatttaatGCTTGCGAAAATCTAAAAAACCAG GAATTTCGCCAAAACCAACTACAGGTTCTTTTGCCAAAACCTTGTGAAAG AAATTAGTTGAGAAAGGGACCTATTCGTAAAAATAAATCCTGCGAGCCGA AAGGAAATATAATATGCAGGTTTTGAATATGTATGAAATCGCGAGATCAA CAAAAAGGCTTACCGAAAGTGCCAAAGAGAGATTTCAGCATGAACTTGGA TGTATATTCACCCATTACTTTGACTACTTTTAAATATAATGTCAACGCTT CAACCAACATCCAGCAAAAACAGTTCAAAATCAAGAAATGAAGAACTGTT GAGGTTGCAGTACAAAGCCATGAGGGTTTGGTTTGATCGATTAACGTAAT GAACACGATAATGAGACAGCCAATAGAGGTACATAAACCGATCAATACTT TGGATGGGATGTGTCGTCTCATTGGTCTAGAAATAATGTATAAAACAAAT TATGAAAGAGAGCTTTTCTGGATGGATAGAAGTACAcgaggctcggaaaa cacgagttaaataacacgagttaaaaaacacgagttacaaaaaacacgag ttacgttaaatgtgacgtcatcaatgggaaattatgacgtcacaagtaga taatttaactcgtcaatttataaggtgcgagttaattaactcgtaagatt aaggtgcaccataaattgacgagttaattaactcgtcagtttaaggtgca ccataaattgacgagttaattaactcgtaagattaaggtgcaccataaat tgaggagttaattaactcgtcagtctaaggtgcaccataaattgacgagt taaattatctacttaTGACttaatttcccattgatgacgtcacatttaac gtaactcgtgttttttgtaactcgtgttttttaactcgtgttatttaact cgtgttttccgagcctcgAAGTACACTTAACAAATGTTGAAATGTGAGGA GGCAGGAGCAGTTTAGGCTTCAGAAAAACACACACTTAAACTCGTTATTA TCTCAAAGAGGACAGCAGTGAAAAGTTTCCACAGAGAGCTGACCTGACCT GGcgaacattttcaaaagcttactTGAAAAGAGCTAACGTCAATAAGGTC ATCATGATACAGGCTAGTGAGATACCACAACCAATGTACGAAATCAGCGT TAAGGCTAATTCATGACCACTATCCACTTTCTCAGCGGTGGTCACTCCAT CAATTGTAAAAAGAACAGCGAAATTTGTTAAATGATTGCATTGGCAGTTG ACCACGGATGTTACGTCATCTATTTCATTTGGTTGGATCGTTATGCACCC TTTTGTTGACCATCCACCTAATTCATCTAGAGATAAAATCAGAATTTCct cgtttttttaattttgtagtACACACTTTTTCggccgtagccgccaattg ccgcgcgggcatttttttgcactaaactcgattcaatcctttttagacac ctttttctattgtcttaggtgcgaaaaaaagactgggacggttttagggt ggtaaaatggacgaaaaaatgcccgcgtggcaattggcggctacggtcga aaaggtgtattggacTATCAGTTTTATGGGTACTTTACCAAAAACTGCTT TAGGGGGAGGCGTACGGGGTTGTGAACATCGAAATAGTCGACGCTTCATG tcaacaccgacagcaaaaGTTGCTGAAATCCTGATACCAATGGCAAAAAG GGCTACTGTCGTTACACCGTACACCTTTAGCCTCAAAGCTACAATCCCCC AATTTATATCTGACACACTTCACATGGTCCCCATTTCCGGACTCGACACT GATAGTGGGGTCCGGGGGACGAATTTTTATCTTGCAAAAATGTTTAGAAT TCTTCTGTCTCAAGATATTGTTGGGGATTGTAgaacaattttcaaacaaa attgatATTAAGTAAGTAGTATCATTAAGTAATACTGGCTCATAATATTT TtctcaacgttcatctaacgttactgGTGTTTGTTGGTGTTTGTTGGTGT TATAGCCATTTTTTGCCTACCGTTCCATGATATTTAACAAtcatttgaaa ttatttatttatcaaGTTAAAATATGAAGATCCGATACCTAACTGACATA AAACGCCAGAAGTAATGTCCAGATAACGTAAAAACTTTCATGTAACGTTA GATGGCTTAGGCCCTTAGATGAACGTCTATATAACATTAGGTGAATgttg ttaaaaacattttgtgTCAGGTTGTTGTAAACGACATATCTTATGACAAC CCCTTCTCAGAGACCCAGTAAGTTTTTTCAGCatgtggggataaaaataa tggactgaaacttgatggggattgatattcccatggttttatggctgggg attttaattcttttgttttcaagtcaaaaaattcagtggggatgggaaaa acaGTAGTAataggattggtttattttcagtggggacaaaaattggggga taattttccaccgggggcgATATTTTGGACTTTGAGAAGTGGGTGTCTTA TGATTAAACACTGGAACTTAAACTACTCTGTCTTTTTCAAGCCACGGCTG TTGAAGTGAAATCTTTGCACCATCTTTGTTAAACAGAACAAAGTAGTACT AGACCACCGTTatcggtaccggcaatttggGCAATATGAACAAAATCCTG ACATGGCGACAAACGAGGAGGTGACagaataggccatttcacagttgaaa tggatcatgggtaatcaggactgattgcgcctcgaTAACGGTTTcctatt ggttagacgcaaaaatcttcaaaaatttccaaaatttggaccaatagtaa gtcgtcattagcgcacAGTTgccctgattacccattacgctctGCCACTG TAAAATAGCCTATGCTCTTATAATTGATCAAATCTATTAAAATGGTGCAT TATTTACCTTCAACCAGGGACAGAGTAGCTAGTAGCTAGTAGCTAGTGTT TTgaataagatatctgtggtctaAACACCGGGCAAAACAAGAAATTTCCA ATTGAAACAATGAAtttcagatttggaaatatcatgaaatatgatatttg aAACCTGaatttggaaatatagaaaagtcatattttcatatttactAATG TTTATGGAAATATcacattttcaagatattttcaggattggaaatctttt atttcgcccagtgaaaCGAATAGCAACCATACCATTTGCATTGAAGTCCC AGAAAACACATTCGTATCTTCCTTTGTTCTTTGCTTCGTTTCCATCAATT GTGTTCTTCTTCAAAGAAACTGAATATTCCAAATCTTCACTTAATTCCAC ACGTTCCGAGTCACCAACGTTAAGAGAAAAGACACCAGAAATAACAGTGG AGTTGGATGTTTTCTTCCCATTTGTGGAGACTGTAGTGAATAGTGAGGAA TCTTTAAAGTAAACCAATTGAATGGTCTTTCCAGAGATTCTGGATTTGTT AACCAGCTTATTTTCAGAGTCTTTCAGTAAACTTCTGGGTAAAATTATGT CAACTCCATCGTTAGCGTCTATTAGACTATCAGCGCTGTCAATGTCTTTC ATGAACTTGATTTTGCCATTCTTATTACtgctttgagtttttttaaccga tatcttttgctttttaaatGAATCTCCATTTTGAGGGAACAGAACTGCCA GTCCGATATTTTGGTTTGCAATCTGTGGTatagtttcttgatttttgtta ttttcatcaGACGATGTgttgaattgaatttttctgGCAACAGCTTCGAT AGATTGAATAACCCTAGGAATAGAGATAAATGAAAACAGTTGTATAATCA CTATAATAGCAACAAGAACCTAGGCTATGTCatatcatagaggtataaag aaaacaggagttgaatgtgtcggtaattggtcgttaaagtcttttgattt cttttataaaatgtatcaaaagaaattctaagctcgcccgNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNtatgagattatgagcatgcatacat cgtaacttttttaatcgtagggcgagcttggttacaatagcatacttctc ctgtctttctttatacctccatggtcaTATCTTcctgataaattttaaaa actccTACTCTACAACAtctaaaaaataagatctaaaaGCCTAGATATGT CTAGTGTGGACTACAAGATCCTTGAAAAACTCTACAAAACATCATTCGAT AATAAACCTTTAACAACGTGGATACTTTGTCCAAAGGCTTCGAGTTTATT TGGATCATAAGATATCAAATATCTGAAGCCTTGCATTGACGTTATAACAT GTATCAAGATATTTGACCCTAGGTAACAAAACCCCATTCTCTTTTGTGTC GTTAATGGTCAAAGAGGCTTCCCcggcggtaactctgatcaagatatcac gcaattttttgtcttcaatcacgatcacgcaaatcagcaaaaGAAATGGA CAATCACGCGtctttttgaaaaagtccaaatcacgtatcacggctcaaaa aaaattaaatcacgATCATgttttgacctctcatcacgcaatcacgtaga aaattttttcaaatcacgtaatcatgctgcaaaaaagtccctatcacgtg TCATCACGAAAACTACTTGGGTGGGCCTCGTCAAAGATGTATTTTCTACA AAACAATAGTCAATAAACCATTACCAAACTTTTATGCGGATATTTGACAA GAACCCATTCCCTTTGTGATGTTAAGGTTCTAAGTGTATTAAATATCAGT TTTTTATACTGCTCACATGGTCAAAGAACCGCCTTGCTGTTGTGCTTTTT CCAATGTGGATGTGTTGACGTCCATGACATTACTTGCTATCTCTAACATG TTGGATGCTACCTAGAAAAAGGACCATTGCATGCGATCAGACTCAAGGAG AATCGAAGCTGGATTTGGGAGGGGGGGCACATACCATTGAGGTTAAAATC TGAAGTGCTGGAGTAGaaaacctttctcaggcaagaaaagtgAAGCTATG CAATCaggacgacggattgtatctagtggttcttttttaggactgcattt ttttaaactaccgatagattttattttcattctggcgtttgtgtaaaaac cacgcgttttggatgggaaactagGCTTTTTAGGCATTTCCCATTCAGGA gcctcgagtctagcccttcgggcttggaagtcaatggcaCATACCCAACA CCTGTTCACCTCTTATCCCGGAGAGCTAGATTCTGGTTAATTCCCCTACA AAACCTTTTCTAGTATTTCAATCATTGAAGAAACCTTTGGATCAATATTT TGTGACGAATCTGTGATAGATTGTATAATACTGCTCGTTAAAATGGTCTC CGTTGTTGATAAAGTGACTGGATTGGATGTCAGATTCTTTAATTGTTTTG AAGCTTTCTCTGGAGATTCGCCACTCTAAAAGAATTAGAAAATTATGTTT AATCAGCGTTTTATTAAGGTTTAGTAATGTACGTTAGATGGGTATTTGCG TGAGAGCTGAATTAAACTTTGATGTTATTCTTTATAGTGGTCCTGATTCT AAAGACCTGTCTCCCCTTGctcgcgcgctgcgatcgcactttctCGAGCA GAGCTTCCACGcttttggtcaaaagaaaaatgaaacaattccattggcgc gatctgacgtaatggttgaaaaaagttgaaatgtgttcaacttttttttc gagtgcctgctacatttttatgacgtaatcgtTTTTCCAagtaacaagtg atacttttatggacctacctggttatgcatttaacacatatataattgat atctacataagcgtgaccattaaacaatcattcagaacacNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaca tatctcatcaaaaaattcagtaattttaagaacattgatgtatgcttatt aatagtgattcttatagataaacatgcgttttttgagccaataaatcttt tttgcaaaaatctgtttgaaCCATCTgctacctatgatggtaccttactt tcctgcaaaaaatcagaaaaaattaatgatccaatttttcacaaagtcca aaaaacacatttttagccgttttttggcccaaatttgcccaaaaattatt ttccaaaaatcgggctccgtcgcattcgagggtttatagttatgcatctt tgtgcaaaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttagccgtttttt ggcccaaatttgcccaaaaaattttttttttgaaaatcgggctccgtcac attcgagggtttatagttatgcatctttatgcaaaaaatcagaaaaaact aacgagccaatcacNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNccaatcacgaggaaagctaataactaa cgaacgaacggacgaacggacgaacggacaaaggttaatttataggacct ccaccggggtaggtccaaaaaagattgaagccaaaaggtgcgatcACAGC GTGCGCAAGTGGAGATCGGCCTTAACGGTAGCTAATTATTAAACAAGTAC AATTTTAAAAGAGGTTACACTCATAAAGAAATATATAAACCTCTATAGTT GTTGTACTCAAAGTTTTTCTTACTATCGATCTGATAAGAAAAATGCAAAT ATCGTATTTTACCACGAGCCATTTATTTACCTTTAAAATGTCTGTCAATT CTCGGCTTCTTTCACTTTCATGCGAGCATCCTTTTACGTTCGGTTCTCTC CAAAATGCACCACTATTGAGATTCCGTCGACATTCCCTCCATGTTGTGGC GTTACCATAGTTACATTGTTGAACTTGGGTGCCACCGACGCGAGTGAAAT TCCACCTGTATTGACCGTAACTTGATGACTGTCCGGTTGTTGATGGGAGA CAATATTCTAAAGATGTAAAAAAGTTCAGTACTGAATTTTGCTCATGTCT TCCCTGGttaatttttgtacttttttagcCCTCTCAGAACGAGAGACCTT GTGTTAGAATACGATTTGGTAAGCGCTATGATTTCCCTTTCCTTGTACCT TATTTCCTCCTTTCCTTCCTTTAAATATCCGAACAAAATTGTTTAATCAA GACTCTTCAGGTGTTAAGAATCTTCTAATTATTGCAGTAGATTATCGTTA CAGAATGACTTTCAAAGCTCGGAGAACCttagaaaagaaaatgaaggtTC AGATTTCAAGAAAGTTAACTATAAAACATTTCTTCTAGGGGGCAGTCATA AGtacttttgaatgaaaaatggcTATAGTACAAGGACAATGCCATTGTTC GGTCCTCCCTGTCGTTGGTGCGGACCCCGTGAAAATCTTGAATATAAACC CAAAATTTATCTTAAGCTTAAtctctttaaaattcaaaatcgagatttcg ACAATATTCTCGCACCTCCCCATTTAAGGGTGTCATAAATTTAGCGCAAA TCCCCCCTAAAATCCTCCACCCCATTTTGTAGAAACTGTCTTACCTGGGT CAAACGCTTTGAATGATTCCATGCGGTAATCGAAAGGATGAAGATTTTGA TCATTGAATACAATTTTCTGATAAAATCCAATTACTGAACTGTTCTGGTG AAGATGACCTCTTGTCTCCACTTCAAATGTCAGCCAGTATGAATTCCTTA AAGTAGAAAGaattgttttctaaaatttcttaaatctttgtttataaGAT TTTTATCAATACACTATTGCTTATCTTGTTGGGTTGCCTTTTGTAAGTGG AAGGTTgcgaatagaaattttattatcttcagaaactttttttcaagcCT TAGACGCGTGCGAGTTGATCTCGGCTCTGTTAGCCGGGCAAAGCAACCAT ATTGGACTAGAGGTAAAAAATAATTAGCATGAACTGTTTTTATATctgct taaaaagctttttttgcgCAGTAAACTCGTGGCGTATATATACCTTTTGT AGGACGCGATGCGATGTTAAATAATAAAACTCTAGCATTCCAAAAATGAC ACACGAGAGCATAAACGTGTGTACTAAATATTTGCTTATCGTTGTTTTGG TAAGCTAGAGTCAGTGGAGTTTTAAATCATTTTCGACATGGCGTCGCGTC CTGCAAAAGGTTTTATGCTCACCTTTGTTTGAGTTTGACGACTTTTGGGC GAAACACCATGAAATGATCGTAAGTGTTCGTTCTACCGATGATAAGTTGA ATCTAAAAAGATCCATACTTTTCacagcgagcacctcactaaaaaccgga atttttcatctcgtttcttagtgagttccactttgacgatttttgaaaaa tagaagcctttcaagtgttttgacgcaatNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttt cgattattttgctactgcaggagcttcgaaagttaaaagtgacgtaaaaa aatcgaatgtttagagcccgaaaacccgggctcaaaacattcggaaaagt cgcaaagtggaatagacgttaattgcgtaaaaaaaacgagggtgacgtct agtataggctatacTTTTCACAGTGTTTacagttcttccgtctcagacag ATTTTCGTCTCTGTGAAATATTTagcaaatttcagcaaaatattcaaaat ctgggCTAATTTGTCGTGTTGAGTTCAATTTCCATCTCAGAGGGAAAACT TTGCTTCAACAACTATTTTCATCATCAACTTTTTGCTCTTGGTGATTACC TTTTTCAACACAtcaattttttctcatttcataTCACTTTTTTTGGGCTT CCAATGACATAAAATTACTTGTAACAGCCTTTATAGATCTAAGAGAAAAA GTGGTCACGAAAATGCAAAATTGTAAAGTAGTTAGATCAAACCTTTTCCC GCAACAGTTTGAAAGCATCACGCCTTTCTCCTTTCGTATTTTTCTGATCT TGAAAAGATTGTCTTGAAATTTGGAAATGGAATTTTGTATGCAATGAATC TATGAACAAAAGGAGTCATTATTGGCGCTATACTTCAGTagtctccttaa ttcgaacctGTTTCATAAATCGAATGTCTACTTGACTTGAACAACTTTTT CGGTCGATTCACCTAAAAAACCGTCTTAAAAAGCTCGTGCTTATTTGAGT TCCAGTAACTCTATTGTATGGCCTCTTTCAACAACAATAAagactccata actcaaacacgtACAGGGAACAcgaatttgttttcaaattatggaaattt tgagATATTCAAGATattgagtaaggtttataaagcattgttgattgaag ggaccagaaaacttgttcgagttaaggagacattgggcttttctagaaaa aaaaacgtataccccctgttgaagaggtccatttccgttccaagggagTA AGGTTTGATTTGTGGcggaatagacgatatcggcttaagtgaaatttttt ccgcacaaagcattgtggggaattctcggaggtcaaatctgagttttcac gttaagccgatatcgtctattccataaggagatacaaaaatctgtcaaaa ataactggaattctaTGGGGGgagtagctttttaaatcctactaaaattc agagttccagaggggtttaagccTGAAATTGCCTTGAATTCCAGGGGcgt tacagcatttccagccacagaaGGATaaacctcctcaacaggggtatacg tttttttttcaggaaaagccgATTTGTGTTATATATGTTCGAGTTCACGA AATCCTCTGTACGAAAGACTGTTATCCCATATAAGATCTGAGATGATTCG AAAATACCTTTGAAAGCAATCGAAACACTTTTCGATGTCTTCATTTCATT GCGTGAGTTCACATACTGACACACGTAGTGACCCTCTTGCCAAAAATTGT CGCCAGATAAAACGAAAATGCCTTTATCAAATTCTGATCGTTTTCGTCTT TTTTGAATCTCTTTATCCTCTTGTAGCCATCTGATGGAGCTTCGATTGGT GTCGATACGTATCCCGTTACATTTTAGCGTAACAGACTTCTTATAGATTG GTTGCTTCGGCTCCACAGTGATATAGGGATCTAGTAATGACAATGCAAAA TATCTTAAGATATCTACAGTAGTGAGTTTATACATTtccacttttgagga cggcagcgtgactgaagcgatttggaataacccgcagttctgacccgcaa aatggAGGACGGTTGACCGTTGATTtgccgtcgtcctcagttggtcagga tctagtcaaataaGAACTTACCGCCTCcgtcgcaaaaaaaaaaacacaaa tacataaactcggcaGTATGTCCAAAGATGACGCAGCGGGTGCTAAAAGT ACTCCTTTCAGAATGGGTAAAAGCTATTCTGGGAACTTACACTGCACAAC ACATGCAATGTTTAACAAACAATTAACATCGAAATTGAAATTTACGCTTA AAGGGATATACAGATGGTTCGAGGTATTTAGCTTGTACATTTCTTCCATA GTCCTGATCTAAAcctctaaatatttttttctaaatattttccaaagtcg agttTGAAATCTCTGAAGATGGGCTCTTTTTACACGCACTTgcagattta agacaatagaacAAGTACGTCAGAAACATGTAAAGGAGTGCAtagctcgt taaaagacaatgaaattacaatcaCAAATCTCTTTGACTGATAAATTCGa cgtggtctaaaaccgcctatgttCTTACGtcaaaattatattgttttttt tttggtaaaagtcaaaaatttataacttcaatatctcgactttggaaaag aGTTAGACAGAAGATTTGGATTTTTTGCTCAGAAGCTTTGAAGTAATCTA CAGTCAAAatatctgattatccctttaactcAAAACTCGATGTTACTTTT CAGTTCTAACCCCCTAACCTTACCTGTATCATCATTGCAGTAACTCAAAT ATGAATAATACATTCTAGGATCATCAATGCATTCGTTGTGGACTCCTTTC TTCGTCAATTCAATATACGCTTTTCTCCAAGTTGAAAAATGCTCTAGACA TTGACCAAAAGGGCATTTCTTAAGTTGGTTCGACCCAAATAATGTTAAAG CATTTTTAGTCTTGAAATAAAGGTGTGGATGCTCGATACCAAATTTATCA ATAGTGATTGATATCGTTTCTGGTTTTGTGATCAAAATTTCTTGGTGAAA AGACACTTTTAGAGTTGTTCCTGTGACTTTAGATTCTAAAAACCCTGAAG ATTTGCCAGTATTAGAATCTAAATTTTGGATGTATTCGAATGTTCTGACG TTTGTTTTTACGCTTGTTTTCAGGTATATGAAATATCTGCCAGGGATGAT GGAAGCAATGTTGTTGGAATCAAGTTCTATCTGTCCAAGAACGATACCAG AGTTTACAAAGACTTTGAAGATCATTGTCGGCCATGATTCGATAGCACTA CTATCCACAAAACGTCTTTTATCCCATGTTGGACAATGACTTTGCACATT CGAATATAAAAGATCCATTGGAAAGCAACTTGGTGTTACAGCTACATCAA AGGTAATGTTTTTAGTTGTACAGTTATTTCTTGCTTCAACTGttaatgaa tatttttcaatcgtgTCTGCTTTGATCGGAATAATATTGCTTAAAATGAC TCCTTTGGATTTGTCGATGCAGAAATGGGTAGAAATTTCTTTCGGCTCAC ATGGTATACCTTTTGGTCCATTTCTCGATAATAACatctttttcaaagct tcttGGACCAGGTTTTGGCTTGTGTTATTATATTTCCAATTTCCGATTCT GTCAACCTTGCGAGATatgaaatttgaataaaattatcGTATTTATAGCC AGTTTAAACTGGCTCGGTTTCGACTAAAACGCGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040764XLOC_040764Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065021-exon-scaffold_428-1491911889:422877..422957TCONS_00065021-exon-scaffold_428-1491911889:422877..422957Clytia hemisphaericaexon
TCONS_00065021-exon-scaffold_428-1510915933:422877..422957TCONS_00065021-exon-scaffold_428-1510915933:422877..422957Clytia hemisphaericaexon
TCONS_00065021-exon-scaffold_428-1575043694:422877..422957TCONS_00065021-exon-scaffold_428-1575043694:422877..422957Clytia hemisphaericaexon
TCONS_00065021-exon-scaffold_428-1491911889:424641..424813TCONS_00065021-exon-scaffold_428-1491911889:424641..424813Clytia hemisphaericaexon
TCONS_00065021-exon-scaffold_428-1510915933:424641..424813TCONS_00065021-exon-scaffold_428-1510915933:424641..424813Clytia hemisphaericaexon
TCONS_00065021-exon-scaffold_428-1575043694:424641..424813TCONS_00065021-exon-scaffold_428-1575043694:424641..424813Clytia hemisphaericaexon
TCONS_00065021-exon-scaffold_428-1491911889:440050..440610TCONS_00065021-exon-scaffold_428-1491911889:440050..440610Clytia hemisphaericaexon
TCONS_00065021-exon-scaffold_428-1510915933:440050..440610TCONS_00065021-exon-scaffold_428-1510915933:440050..440610Clytia hemisphaericaexon
TCONS_00065021-exon-scaffold_428-1575043694:440050..440610TCONS_00065021-exon-scaffold_428-1575043694:440050..440610Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_428supercontigscaffold_428:422877..440610 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

min expression (0 tpm) - - (2.94455 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0.23685 0 0.69535 0.666314 0.190575 0.780912 0 0.232323 0.855107 0.307967 0.557074 0.458455 0.618094 0.43968 2.94455 1.65361 0.143137 0.221119 0.0754339 0 1.55425 0 0 0 0 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00065021 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
ZOOM
x 1
POSITION
0
100200300400500600700800Sequence
Match NameE-valueIdentityDescription
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