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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00065053 ID=TCONS_00065053|Name=TCONS_00065053|organism=Clytia hemisphaerica|type=transcript|length=5339bp
gtttgccGTGGCGCTTAGTTGAGGAAATACGGTACCTAACTCAGGAGTTT
ACTAGGCTGCTGGCACCCATTACAGTAACGGATTCGATTTGATTTTGAAC
GATTTGATAACGATTAGAATCTagatcaaaacatttgaaagagAATTCGT
CATTCTTTTTGTCAAATAGGCTGTTGGAAAATAAAATGTCGGTCATTGAA
GTTGCAAGAGATCTGTCGCATGGTTTGCGCATTAAGTTTAACTGAGCGCC
ATGTGATTTTCTGCTATTGAAAAATCTCTCACTTCATTTTTAAATGCAGT
TAACTTTTTTAAAAGCTCTAGGATTATAAATATTCAGAATAGATTTAAAC
TCTGTCATATTGCTAGATATCTGTTTGTATGGTTTGCACCTGAGGTTCAA
CTGAGTGCCATGCATGTGATAGCCTCAGTTGAAATCATGTTTTGCTTTTG
AGAATTATCACAACTATCCTCAAATACCTTCTGTAGTTTTCTCTGTTGAC
AGTCTTGGTTATtacatgaaggtaataaagatatatggatggagagaaaa
cgtctcggtaatgacctaaatggtcgttgaaatctttttaataaatctat
tcaaagcggcttttctttgatgtaccatcattggaagcgaaaaaatccaa
aatgtaaatttataagaacagaaagaggctggtccgttgattttgaaaaa
Ncacttgagaaagtcagaaaatcaatatagaagataggaaagtaccgtag
attagtcaattagactattgtattatcgacatgcgtcctttaagcttgac
aaagttttagaaacatgtaagaaacatttaaggctcaaaaggccgatttc
ttaagaaacattgaggctgcttgggaaaactagtttcttaaaagaaaaaa
aacgtgtagatgtCTCCTTACAAGTTTGTAGATAGGATTAGGCTAAAATA
GGAAAGACATTGAGCAACATATTTTTCCTAAcaattattgtattttttgc
GGGGATTATACCTGAAAACCTATCCAAGATTCTGTATGATGAACAAAAAG
TGATTTCCGTTCTACTGACATCTTCAGTGATGGTTTTTCTACATGATCTG
acagaaattttttaattaagtCAACCAAGTTGAACTTCCCCTTTCTGGAA
ATCTGAAATTTTGTCAATAATGAATAAAATGATGATTTCCGTTCTACTGA
CTTATTCAGTGATGCGTTTTCTACATGAGCTGAGACACGAATTGTTACAA
ATACAAGGTTTTGAGATGTCCTTGTTTTACTATTTttggtaatttaaaaa
aaaaatcttaactactgctttttattgtattttatcatttgtttACTAAC
TTCACTTGAGAATTGGCTGTGTGgtcttttgatgtttttgatatTTACAG
CTTGGTCTACCTTAATGCTTGTTAACCCAGTGTAGACAGATTTTAGGCTT
TACATGCGCTGCCTTTAGATATTGGAATGTAAATTACTTTAGCACGACCA
GGCGGTAAACCAAAAACATCATCTGGATAACCAGGGTTTATGCCTGAAAG
CGTATTTGATATTCTGAATGATGAACAAAAAGTGATTTCCGTTCTACTGA
CATCTTCAGTGATGGTTTTTCTACATGATCTGAcagaaattttttaataa
agtcAACCAAGTTGAACTTCCCCTTTCTGGGAATCTGAAATTTGTCAATG
ATGAATAAAATGATGATTTCCGTTCTACTGACTTATTCAGTGATGCATTT
TCTACATGAGCTGAGACAAGAATTGTTACAAATGCAGGGTTTTGAGATGT
CCTAGTTTTACTATTTttggtaatttaaaaaaaaatcttaactgcttttt
attgtattttatcatttgtttACTAACTTCACTTGAGAATTGGCTGTGTG
gtcttttgatgtttttgatatTTACAGCTTGGTCTACCTTAATGCTTGTT
AACCCAGTGTAGACAGATTTTAGGCTTTACATGCGCTGCCTTTAGATATT
GGAATGTAAATTACTTTAGCACGACCAGGCGGTAAACCAAAAACATCATC
TGGATAACCAGGGTTTATGCCTGAAAGCGTATTTGATATTCTGAATGATG
AACAAAAAGTGATTTCCGTTCTACTGACATCTTCAGTGATGGTTTTTCTA
CATGATCTGAcagaaattttttaataaagtcAACCAAGTTGAACTTCCCC
TTTCTGGGAATCTGAAATTTGTCAATGATGAATAAAATGATGATTTCCGT
TCTACTGACTTATTCAGTGATGCATTTTCTACATGAGCTGAGACAAGAAT
TGTTACAAATGCAGGGTTTTGAGATGTCCTAGTTTTACTATTTttggtaa
tttaaaaaaaaatcttaactgctttttattgtattttatcatttgtttAC
TAACTTCACTTGAGAATTGGCTGTGTGgtcttttgatgtttttgatatTT
ACAGCTTGGTCTACCTTAATGCTTGTTAACCCAGTGTAGACAGATTTTAG
GCTTTACATGCGCTGCCTTTAGATATTGGAATGTAAATTACTTTAGCACG
ACCAGGCGGTAAACCAAAAACATCATCTGGATAACCAGGGTTTATGCCTG
AAAGCGTATTTGATATTCTGAATGATGAACAAAAAGTGATTTCCGTTCTA
CTGACATCTTCAGTGATGGTTTTTCTACATGATCTGAcagaaatttttta
ataaagtcAACCAAGTTGAACTTCCCCTTTCTGGGAATCTGAAATTTGTC
AATGATGAATAAAATGATGATTTCCGTTCTACTGACTTATTCAGTGATGC
ATTTTCTACATGAGCTGAGACAAGAATTGTTACAAATGCAGGGTTTTGAG
ATGTCCTAGTTTTACTATTTttggtaatttaaaaaaaaatcttaactgct
ttttattgtattttatcatttgtttACTAACTTCACTTGAGAATTGGCTG
TGTGgtcttttgatgtttttgatatTTACAGCTTGGTCTACCTTAATGCT
TGTTAACCCAGTGTAGACAGATTTTAGGCTTTACATGCGCTGCCTTTAGA
TATTGGAATGTAAATTACTTTAGCACGACCAGGCGGTAAACCAAAAACAT
CATCTGGATAACCAGGGTTTATGCCTGAAAGCGTATTTGATATTCTGAAT
GATGAACAAAAAGTGATTTCCGTTCTACTGACATCTTCAGTGATGGTTTT
TCTACATGATCTGAcagaaattttttaataaagtcAACCAAGTTGAACTT
CCCCTTTCTGGGAATCTGAAATTTGTCAATGATGAATAAAATGATGATTT
CCGTTCTACTGACTTATTCAGTGATGCATTTTCTACATGAGCTGAGACAA
GAATTGTTACAAATGCAGGGTTTTGAGATGTCCTAGTTTTACTATTTttg
gtaatttaaaaaaaaatcttaactgctttttattgtattttatcatttgt
ttACTAACTTCACTTGAGAATTGGCTGTGTGgtcttttgatgtttttgat
atTTACAGCTTGGTCTACCTTAATGCTTGTTAACCCAGTGTAGACAGATT
TTAGGCTTTACATGCGCTGCCTTTAGATATTGGAATGTAAATTACTTTAG
CACGACCAGGCGGTAAACCAAAAACATCATCTGGATAACCAGGGTTTATG
CCTGAAAGCGTATTTGATATTCTGAATGATGAACAAAAAGTGATTTCCGT
TCTACTGACATCTTCAGTGATGGTTTTTCTACATGATCTGAcagaaattt
tttaataaagtcAACCAAGTTGAACTTCCCCTTTCTGGGAATCTGAAATT
TGTCAATGATGAATAAAATGATGATTTCCGTTCTACTGACTTATTCAGTG
ATGCATTTTCTACATGAGCTGAGACAAGAATTGTTACAAATGCAGGGTTT
TGAGATGTCCTAGTTTTACTATTTttggtaatttaaaaaaaaatcttaac
tgctttttattgtattttatcatttgtttACTAACTTCACTTGAGAATTG
GCTGTGTGGTCTTTTGATGTTTCTGATATTTACAGCTTGGTCTACCTTAA
TGCTCATTAACCCAGGGTAGACAGATTTTAGGCTTTACATGCGCTGCCTT
CAGATATTGGAATGTAAATTACTTTAGCACGACCAGGCGGTAAACCAAAA
ACATCATCTGGATAACCAGGGTTTATGCCTGAAAGCGTATTTGATATTCT
GAATGATGAACAAAAAGTGATTTCCGTTCTACTGACATCTTCAGTGATGG
TTTTTCTACATGATCTGACAGAAATCTTTATATAAAATCAACAAGTTTGA
CCTCCCTTCCTGTCCCTTCTGAAAATCTTTCTGAACATTTTGTCAATGAT
GAATAAAATTATGATTTCCGTTCTACTGACTTATCCAGTGATGCGTTTTC
TACATGATCTGAGACACGAACAGAACTTTGAAGGTCTGACCTGATATATC
TGATTGATTAGAACAGGTTAGAATTCTTTCTTatgaatttttgttgtttt
acatGTCAGGAACGTGCTGGACGATACTGCGGAAGTCTCCGTGTCTTGAA
CTCATACTGGATTGCTCAAGATTCCACCTTCAAATATTTCGAAGTAATCA
TGGTCGACCCACAACATAAAGCTATCCGAAGAGATCCACGCATCAACTGG
ATCGTCAAAAGCGTACATAAGCATCGTGAATTACGAGGACTTACTTCTGC
TGGACGCAAAAACCGTGGAATTGCCAAAGGACATGGTTATAATAAGGTCA
AGTCATCTTCAAGACGTGCCACATGGAAGAAACACAATTTGGTCAGCTTA
CGTCGTTATCGTTAAGTTATTGCCACCTTGTAATATTTCTCCAATTCAAA
ATACAAATATGCACCTGGAAGGGAATATTCTCGTTTCTCGAATTCTTCTT
TGATTAAATTAATCTAATTCCTTGGCTGAATCTGGCTAGAGAGATACCTT
ATTTTGGCGACACTAATTTTGACCAAGAAAGTCTTTCGTTTTGACGAGCG
GCAAAAATCCTGAACAtttctaattttggcgaatgacagcgtaaatctgt
tctattttgtcttatttgaagctttttttgtgaactcaAGATTTTGGCAA
ACTAcctgcaaccgcgaaattaaattcccgtcaaatttagTTTATCCagc
tatccgccaaattaaattcactctgagaaaactttttcggccatttgCGA
AATgaaatttccgccaaaatttcttcctttaaggtattaaattttgatct
atctttagaaatttttgaaaaactggtTTATGAATTTAATCATGAAACTT
GCGTTATCAACCTTTGCTTCAgccgtacaaacttttgcg Run BLAST on NCBI protein sequence of TCONS_00065053-protein >TCONS_00065053-protein ID=TCONS_00065053-protein|Name=TCONS_00065053-protein|organism=Clytia hemisphaerica|type=polypeptide|length=110bp
MNFCCFTCQERAGRYCGSLRVLNSYWIAQDSTFKYFEVIMVDPQHKAIRR
DPRINWIVKSVHKHRELRGLTSAGRKNRGIAKGHGYNKVKSSSRRATWKK
HNLVSLRRYR Run BLAST on NCBI transcript from alignment at scaffold_428:467535..473066- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00065053 ID=TCONS_00065053|Name=TCONS_00065053|organism=Clytia hemisphaerica|type=transcript|length=5532bp|location=Sequence derived from alignment at scaffold_428:467535..473066- (Clytia hemisphaerica)
GTTTGCCGTGGCGCTTAGTTGAGGAAATACGGTACCTAACTCAGGAGTTT
ACTAGGCTGCTGGCACCCATTACAGTAACGGATTCGATTTGATTTTGAAC
GATTTGATAACGATTAGAATCTAGATCAAAACATTTGAAAGAGAATTCGT
CATTCTTTTTGTCAAATAGGCTGTTGGAAAATAAAATGTCGGTCATTGAA
GTTGCAAGAGATCTGTCGCATGGTTTGCGCATTAAGTTTAACTGAGCGCC
ATGTGATTTTCTGCTATTGAAAAATCTCTCACTTCATTTTTAAATGCAGT
TAACTTTTTTAAAAGCTCTAGGATTATAAATATTCAGAATAGATTTAAAC
TCTGTCATATTGCTAGATATCTGTTTGTATGGTTTGCACCTGAGGTTCAA
CTGAGTGCCATGCATGTGATAGCCTCAGTTGAAATCATGTTTTGCTTTTG
AGAATTATCACAACTATCCTCAAATACCTTCTGTAGTTTTCTCTGTTGAC
AGTCTTGGTTATTACATGAAGGTAATAAAGATATATGGATGGAGAGAAAA
CGTCTCGGTAATGACCTAAATGGTCGTTGAAATCTTTTTAATAAATCTAT
TCAAAGCGGCTTTTCTTTGATGTACCATCATTGGAAGCGAAAAAATCCAA
AATGTAAATTTATAAGAACAGAAAGAGGCTGGTCCGTTGATTTTGAAAAA
NCACTTGAGAAAGTCAGAAAATCAATATAGAAGATAGGAAAGTACCGTAG
ATTAGTCAATTAGACTATTGTATTATCGACATGCGTCCTTTAAGCTTGAC
AAAGTTTTAGAAACATGTAAGAAACATTTAAGGCTCAAAAGGCCGATTTC
TTAAGAAACATTGAGGCTGCTTGGGAAAACTAGTTTCTTAAAAGAAAAAA
AACGTGTAGATGTCTCCTTACAAGTTTGTAGATAGGATTAGGCTAAAATA
GGAAAGACATTGAGCAACATACAGTGTTAAAAGTTCTTCCGTCTCAGACG
GATTTCCGTCTCAGACGGATTTCCGTCTCAGAGAAGTATATAGAGAGGCT
TTTCCGTCTCAAAGTTCTGCATAATTCACCAAACATTCAAGAATATGTAC
TGATTTGCTGTGTAAAATCCATTTTCCGTCTCAGACGAAAATCTTGCTTT
GACCACTGAACATATTTTTCCTAACAATTATTGTATTTTTTGCGGGGATT
ATACCTGAAAACCTATCCAAGATTCTGTATGATGAACAAAAAGTGATTTC
CGTTCTACTGACATCTTCAGTGATGGTTTTTCTACATGATCTGACAGAAA
TTTTTTAATTAAGTCAACCAAGTTGAACTTCCCCTTTCTGGAAATCTGAA
ATTTTGTCAATAATGAATAAAATGATGATTTCCGTTCTACTGACTTATTC
AGTGATGCGTTTTCTACATGAGCTGAGACACGAATTGTTACAAATACAAG
GTTTTGAGATGTCCTTGTTTTACTATTTTTGGTAATTTAAAAAAAAAATC
TTAACTACTGCTTTTTATTGTATTTTATCATTTGTTTACTAACTTCACTT
GAGAATTGGCTGTGTGGTCTTTTGATGTTTTTGATATTTACAGCTTGGTC
TACCTTAATGCTTGTTAACCCAGTGTAGACAGATTTTAGGCTTTACATGC
GCTGCCTTTAGATATTGGAATGTAAATTACTTTAGCACGACCAGGCGGTA
AACCAAAAACATCATCTGGATAACCAGGGTTTATGCCTGAAAGCGTATTT
GATATTCTGAATGATGAACAAAAAGTGATTTCCGTTCTACTGACATCTTC
AGTGATGGTTTTTCTACATGATCTGACAGAAATTTTTTAATAAAGTCAAC
CAAGTTGAACTTCCCCTTTCTGGGAATCTGAAATTTGTCAATGATGAATA
AAATGATGATTTCCGTTCTACTGACTTATTCAGTGATGCATTTTCTACAT
GAGCTGAGACAAGAATTGTTACAAATGCAGGGTTTTGAGATGTCCTAGTT
TTACTATTTTTGGTAATTTAAAAAAAAATCTTAACTGCTTTTTATTGTAT
TTTATCATTTGTTTACTAACTTCACTTGAGAATTGGCTGTGTGGTCTTTT
GATGTTTTTGATATTTACAGCTTGGTCTACCTTAATGCTTGTTAACCCAG
TGTAGACAGATTTTAGGCTTTACATGCGCTGCCTTTAGATATTGGAATGT
AAATTACTTTAGCACGACCAGGCGGTAAACCAAAAACATCATCTGGATAA
CCAGGGTTTATGCCTGAAAGCGTATTTGATATTCTGAATGATGAACAAAA
AGTGATTTCCGTTCTACTGACATCTTCAGTGATGGTTTTTCTACATGATC
TGACAGAAATTTTTTAATAAAGTCAACCAAGTTGAACTTCCCCTTTCTGG
GAATCTGAAATTTGTCAATGATGAATAAAATGATGATTTCCGTTCTACTG
ACTTATTCAGTGATGCATTTTCTACATGAGCTGAGACAAGAATTGTTACA
AATGCAGGGTTTTGAGATGTCCTAGTTTTACTATTTTTGGTAATTTAAAA
AAAAATCTTAACTGCTTTTTATTGTATTTTATCATTTGTTTACTAACTTC
ACTTGAGAATTGGCTGTGTGGTCTTTTGATGTTTTTGATATTTACAGCTT
GGTCTACCTTAATGCTTGTTAACCCAGTGTAGACAGATTTTAGGCTTTAC
ATGCGCTGCCTTTAGATATTGGAATGTAAATTACTTTAGCACGACCAGGC
GGTAAACCAAAAACATCATCTGGATAACCAGGGTTTATGCCTGAAAGCGT
ATTTGATATTCTGAATGATGAACAAAAAGTGATTTCCGTTCTACTGACAT
CTTCAGTGATGGTTTTTCTACATGATCTGACAGAAATTTTTTAATAAAGT
CAACCAAGTTGAACTTCCCCTTTCTGGGAATCTGAAATTTGTCAATGATG
AATAAAATGATGATTTCCGTTCTACTGACTTATTCAGTGATGCATTTTCT
ACATGAGCTGAGACAAGAATTGTTACAAATGCAGGGTTTTGAGATGTCCT
AGTTTTACTATTTTTGGTAATTTAAAAAAAAATCTTAACTGCTTTTTATT
GTATTTTATCATTTGTTTACTAACTTCACTTGAGAATTGGCTGTGTGGTC
TTTTGATGTTTTTGATATTTACAGCTTGGTCTACCTTAATGCTTGTTAAC
CCAGTGTAGACAGATTTTAGGCTTTACATGCGCTGCCTTTAGATATTGGA
ATGTAAATTACTTTAGCACGACCAGGCGGTAAACCAAAAACATCATCTGG
ATAACCAGGGTTTATGCCTGAAAGCGTATTTGATATTCTGAATGATGAAC
AAAAAGTGATTTCCGTTCTACTGACATCTTCAGTGATGGTTTTTCTACAT
GATCTGACAGAAATTTTTTAATAAAGTCAACCAAGTTGAACTTCCCCTTT
CTGGGAATCTGAAATTTGTCAATGATGAATAAAATGATGATTTCCGTTCT
ACTGACTTATTCAGTGATGCATTTTCTACATGAGCTGAGACAAGAATTGT
TACAAATGCAGGGTTTTGAGATGTCCTAGTTTTACTATTTTTGGTAATTT
AAAAAAAAATCTTAACTGCTTTTTATTGTATTTTATCATTTGTTTACTAA
CTTCACTTGAGAATTGGCTGTGTGGTCTTTTGATGTTTTTGATATTTACA
GCTTGGTCTACCTTAATGCTTGTTAACCCAGTGTAGACAGATTTTAGGCT
TTACATGCGCTGCCTTTAGATATTGGAATGTAAATTACTTTAGCACGACC
AGGCGGTAAACCAAAAACATCATCTGGATAACCAGGGTTTATGCCTGAAA
GCGTATTTGATATTCTGAATGATGAACAAAAAGTGATTTCCGTTCTACTG
ACATCTTCAGTGATGGTTTTTCTACATGATCTGACAGAAATTTTTTAATA
AAGTCAACCAAGTTGAACTTCCCCTTTCTGGGAATCTGAAATTTGTCAAT
GATGAATAAAATGATGATTTCCGTTCTACTGACTTATTCAGTGATGCATT
TTCTACATGAGCTGAGACAAGAATTGTTACAAATGCAGGGTTTTGAGATG
TCCTAGTTTTACTATTTTTGGTAATTTAAAAAAAAATCTTAACTGCTTTT
TATTGTATTTTATCATTTGTTTACTAACTTCACTTGAGAATTGGCTGTGT
GGTCTTTTGATGTTTCTGATATTTACAGCTTGGTCTACCTTAATGCTCAT
TAACCCAGGGTAGACAGATTTTAGGCTTTACATGCGCTGCCTTCAGATAT
TGGAATGTAAATTACTTTAGCACGACCAGGCGGTAAACCAAAAACATCAT
CTGGATAACCAGGGTTTATGCCTGAAAGCGTATTTGATATTCTGAATGAT
GAACAAAAAGTGATTTCCGTTCTACTGACATCTTCAGTGATGGTTTTTCT
ACATGATCTGACAGAAATCTTTATATAAAATCAACAAGTTTGACCTCCCT
TCCTGTCCCTTCTGAAAATCTTTCTGAACATTTTGTCAATGATGAATAAA
ATTATGATTTCCGTTCTACTGACTTATCCAGTGATGCGTTTTCTACATGA
TCTGAGACACGAACAGAACTTTGAAGGTCTGACCTGATATATCTGATTGA
TTAGAACAGGTTAGAATTCTTTCTTATGAATTTTTGTTGTTTTACATGTC
AGGAACGTGCTGGACGATACTGCGGAAGTCTCCGTGTCTTGAACTCATAC
TGGATTGCTCAAGATTCCACCTTCAAATATTTCGAAGTAATCATGGTCGA
CCCACAACATAAAGCTATCCGAAGAGATCCACGCATCAACTGGATCGTCA
AAAGCGTACATAAGCATCGTGAATTACGAGGACTTACTTCTGCTGGACGC
AAAAACCGTGGAATTGCCAAAGGACATGGTTATAATAAGGTCAAGTCATC
TTCAAGACGTGCCACATGGAAGAAACACAATTTGGTCAGCTTACGTCGTT
ATCGTTAAGTTATTGCCACCTTGTAATATTTCTCCAATTCAAAATACAAA
TATGCACCTGGAAGGGAATATTCTCGTTTCTCGAATTCTTCTTTGATTAA
ATTAATCTAATTCCTTGGCTGAATCTGGCTAGAGAGATACCTTATTTTGG
CGACACTAATTTTGACCAAGAAAGTCTTTCGTTTTGACGAGCGGCAAAAA
TCCTGAACATTTCTAATTTTGGCGAATGACAGCGTAAATCTGTTCTATTT
TGTCTTATTTGAAGCTTTTTTTGTGAACTCAAGATTTTGGCAAACTACCT
GCAACCGCGAAATTAAATTCCCGTCAAATTTAGTTTATCCAGCTATCCGC
CAAATTAAATTCACTCTGAGAAAACTTTTTCGGCCATTTGCGAAATGAAA
TTTCCGCCAAAATTTCTTCCTTTAAGGTATTAAATTTTGATCTATCTTTA
GAAATTTTTGAAAAACTGGTTTATGAATTTAATCATGAAACTTGCGTTAT
CAACCTTTGCTTCAGCCGTACAAACTTTTGCG Coding sequence (CDS) from alignment at scaffold_428:467535..473066- >TCONS_00065053 ID=TCONS_00065053|Name=TCONS_00065053|organism=Clytia hemisphaerica|type=CDS|length=333bp|location=Sequence derived from alignment at scaffold_428:467535..473066- (Clytia hemisphaerica)
ATGAATTTTTGTTGTTTTACATGTCAGGAACGTGCTGGACGATACTGCGG
AAGTCTCCGTGTCTTGAACTCATACTGGATTGCTCAAGATTCCACCTTCA
AATATTTCGAAGTAATCATGGTCGACCCACAACATAAAGCTATCCGAAGA
GATCCACGCATCAACTGGATCGTCAAAAGCGTACATAAGCATCGTGAATT
ACGAGGACTTACTTCTGCTGGACGCAAAAACCGTGGAATTGCCAAAGGAC
ATGGTTATAATAAGGTCAAGTCATCTTCAAGACGTGCCACATGGAAGAAA
CACAATTTGGTCAGCTTACGTCGTTATCGTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00065053-exon-scaffold_428-1575043694:472099..473066 | TCONS_00065053-exon-scaffold_428-1575043694:472099..473066 | Clytia hemisphaerica | exon |
| TCONS_00065053-exon-scaffold_428-1575043694:467535..471905 | TCONS_00065053-exon-scaffold_428-1575043694:467535..471905 | Clytia hemisphaerica | exon |
| TCONS_00065053-exon-scaffold_428-1510915933:472099..473066 | TCONS_00065053-exon-scaffold_428-1510915933:472099..473066 | Clytia hemisphaerica | exon |
| TCONS_00065053-exon-scaffold_428-1510915933:467535..471905 | TCONS_00065053-exon-scaffold_428-1510915933:467535..471905 | Clytia hemisphaerica | exon |
| TCONS_00065053-exon-scaffold_428-1491911889:472099..473066 | TCONS_00065053-exon-scaffold_428-1491911889:472099..473066 | Clytia hemisphaerica | exon |
| TCONS_00065053-exon-scaffold_428-1491911889:467535..471905 | TCONS_00065053-exon-scaffold_428-1491911889:467535..471905 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_428 | supercontig | scaffold_428:467535..473066 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
| GO:0005622 | intracellular |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006412 |
translation |
| cellular_component |
GO:0005622 |
intracellular |
| cellular_component |
GO:0005840 |
ribosome |
| molecular_function |
GO:0003735 |
structural constituent of ribosome |
Blast
BLAST of TCONS_00065053 vs. Swiss-Prot (Human)
Match: RL15 (60S ribosomal protein L15 OS=Homo sapiens GN=RPL15 PE=1 SV=2) HSP 1 Score: 148.673 bits (374), Expect = 3.029e-39 Identity = 65/104 (62.50%), Postives = 83/104 (79.81%), Query Frame = 1
Query: 4501 TCQERAGRYCGSLRVLNSYWIAQDSTFKYFEVIMVDPQHKAIRRDPRINWIVKSVHKHRELRGLTSAGRKNRGIAKGHGYNKVKSSSRRATWKKHNLVSLRRYR 4812
+ERAGR+CG+LRVLNSYW+ +DST+K+FEVI++DP HKAIRR+P WI K VHKHRE+RGLTSAGRK+RG+ KGH ++ SRRA W++ N + L RYR
Sbjct: 101 VAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRRNTLQLHRYR 204
The following BLAST results are available for this feature:
|
