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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00065290 ID=TCONS_00065290|Name=TCONS_00065290|organism=Clytia hemisphaerica|type=transcript|length=525bp
CGTCTTCTAGTGAAATACACGCCCCTGTATCTCGCCTTCCAGCTTACTGA
AGTTACGGATCAATTGGGTTACTTAATAAGGTGCGAACTCTTTATGTCTT
TTcagtaaaaacaacaaaaacccATGTGAATTCCAAtcttcttttctctt
tatcACCCAGACAAACAATGTAAATTGGACTAAGATCTCCGGTGAAAACA
GCGTGTTCACCGAAACTAAAACCATCGTCAGTTCAAACTCCAGTATCACG
TACATTCAGAACGACATGATATTCACTTCAGTCACCAAAGATATGTATGG
ACATTATCAATGTTATGGTGAAAACAACCTTGGCAATGTCAGTGATAGTT
TTTGGGTTTATGTCAATTgcGCGCCCAATGTTACGGCAACGACTCTTGTA
CAACCATCTGTCACACCAACAGAAGGACAATCGGTCACGTACACTTGTAC
AGTAGAGGGTTTTCCTAAACCCACAGTCACGTGGCAGAATGATGGTGTTG
CTATGACAACCAATGTCACTGAGGT Run BLAST on NCBI transcript from alignment at scaffold_435:293754..294815- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00065290 ID=TCONS_00065290|Name=TCONS_00065290|organism=Clytia hemisphaerica|type=transcript|length=1062bp|location=Sequence derived from alignment at scaffold_435:293754..294815- (Clytia hemisphaerica)
CGTCTTCTAGTGAAATACACGCCCCTGTATCTCGCCTTCCAGCTTACTGA
AGTTACGGATCAATTGGGTTACTTAATAAGGTGCGAACTCTTTATGTCTT
TTCAGTAAAAACAACAAAAACCCATGTGAATTCCAATCTTCTTTTCTCTT
TATCACCCAGACAAACAATGTAAATTGGACTAAGATCTCCGGTGAAAACA
GCGTGTTCACCGAAACTAAAACCATCGTCAGTTCAAACTCCAGTATCACG
TACATTCAGAACGACATGATATTCACTTCAGTCACCAAAGATATGTATGG
ACATTATCAATGTTATGGTGAAAACAACCTTGGCAATGTCAGTGATAGTT
TTTGGGTTTATGTCAATTGTAAGTCGAATGCATTGATTTTCCACTTTTGT
ATTTTTGATATTGTCTATACATCAATCCACCTATCCGCAGACACGTGTTT
TGTTCTTGTTAGGACTCGTCGGTGCAGCTCGGGTAAGCGAGTAAACACTA
AGTGTTGAGCTTCGCATAATCGCTTGTGGTGAACGGAGAAGCACAGCTTG
CTCCTCAGCACAGTCTAAAGAGTGTCACTCGGCTGATGATTGTCTAAAGA
CATGAAAGTTAGAGGACTACAAAAATGAAATAGTTGTTTTCTTCTTGATT
GTTATGTATAAAAACTTAGAATCACTTAAGAAAGAAAAAAGACACATCTC
CGTGTTACTCTTCATTTACTAGAAGTTCCAGACCTCTTAAAATCATTTAT
TCAGGCCTTTCATGTTTCATATTTAACCAGTCAGATTTTATCAAAAATGG
TATAAACCGTTCTTCCAACTTATATCATATTTTTTTACGTTTAAATAAAA
CCTTGAATTTTGTTATGATCCTTGATCTAACAGGTTCTAATTTTTATTTT
TCAAGGCGCGCCCAATGTTACGGCAACGACTCTTGTACAACCATCTGTCA
CACCAACAGAAGGACAATCGGTCACGTACACTTGTACAGTAGAGGGTTTT
CCTAAACCCACAGTCACGTGGCAGAATGATGGTGTTGCTATGACAACCAA
TGTCACTGAGGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00065290-exon-scaffold_435-1575043694:294448..294815 | TCONS_00065290-exon-scaffold_435-1575043694:294448..294815 | Clytia hemisphaerica | exon |
| TCONS_00065290-exon-scaffold_435-1575043694:293754..293910 | TCONS_00065290-exon-scaffold_435-1575043694:293754..293910 | Clytia hemisphaerica | exon |
| TCONS_00065290-exon-scaffold_435-1510915933:294448..294815 | TCONS_00065290-exon-scaffold_435-1510915933:294448..294815 | Clytia hemisphaerica | exon |
| TCONS_00065290-exon-scaffold_435-1510915933:293754..293910 | TCONS_00065290-exon-scaffold_435-1510915933:293754..293910 | Clytia hemisphaerica | exon |
| TCONS_00065290-exon-scaffold_435-1491911889:294448..294815 | TCONS_00065290-exon-scaffold_435-1491911889:294448..294815 | Clytia hemisphaerica | exon |
| TCONS_00065290-exon-scaffold_435-1491911889:293754..293910 | TCONS_00065290-exon-scaffold_435-1491911889:293754..293910 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_435 | supercontig | scaffold_435:293754..294815 - |
Blast
The following BLAST results are available for this feature:
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