TCONS_00065653 (transcript) - C. hemisphaerica

Overview
NameTCONS_00065653
Unique NameTCONS_00065653
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4733

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00065653 ID=TCONS_00065653|Name=TCONS_00065653|organism=Clytia hemisphaerica|type=transcript|length=4733bp
GATTAACTCTCCGTCCAACCGtccaagtttttgaaaatatgatcgcGTGA
GAAGATCTTGATGAGACTGGGTACCAATTAAGAATTAAAAAAGGGTGTAT
ATAATTTGTAAAGAGATGTGCAACTGCTATCAGTCTTTAAACGACTGTAG
ATGAAGTAGTGCGTCGGTTTTGATTTAAAGTCAAGATGCCTTCTGCAGAA
ATAAAGACATCAAAACCTGGGAACAGGCAAGAACCGCCAGATAATAGTGC
AGGAAAAACTGGGAAAGGCAAGAAGCCAGGAGATAAAACCGTAATCCCTA
AGAAACAAGGAGATAAAACTCCTAAAAAGCCAGGGGATAAAGAAACGCCA
GCGAAACCCACTCCGAAACCGACTCCTATGACAGAAGaggaaaaacgaaa
attgcACAACGCTATTCTTCGTACTATCATCCTATTATTTAATGTTCTCA
TTGGTCCAGCTTTAAGATGTTTCATTTTCTTATGCGTCAGTATACAAGTC
TACGGTGGATACAAAACCATTCAACACTATCAACCAGTCTATGATCCAGA
TTCTAAAACACctgaattttacaaaaatgtgGAATTTATTGCGATGTATC
TTCGAGAAATCATCGAATGTTTGGTTGCCTTTGCACTGCTGACAAGTTTG
ATTGAGAAAAGTAACGGATTTCTTGGTCGACCAGTTAAAGAGAGTTTTTT
CCTGTATTACGAAATTGGTTTCACTTCAGCGTGGACTGGATTAGGATTTT
TCTTTATCATCACATCAAACATCTcagactccaaaaccatccaagTTTTA
CTTGATCAATTTTGCATCAACACTAAAGAAGATTGCCATATGGATATTCT
ATACAAAGTACCAAGCTACACCAGTTTTGGACTTGGTATCATTTGTATGT
TGGTTGGTATTGTTAGAATCATCCTTGGTCTAAATCGTCGTCCTGATCCA
GATAGCACCCTTCAAGACCCCTCCCCATACAAGCAATGGACACAAATCAC
ACCAGTATCCACCAGATTCTTTTTATTCCTCTATTTCATGGTCCTCATCT
CCTCCACAATCTTCGTCGCTGGTTTCCAATTCTTCATGTATTACCACACT
GAAAAGGACATAAAAATCATCAGCAATGTTAACAACATCAAACTTGCCGA
TGATATCTTAACAATCTTAACCCTGAACATATCTCATATCCTTGTTGCTG
GATTTGTCTTTTTGAGACTGGTCAAAATGTTTTGGTATAAACCCTTCAAA
CCGATAGCTTACCTAACCGCCTTACTGTATCTTTACTCCATTGTCAGCTT
TTTCTCACAATTGGACAAACTACAAAAAGCCTTAAACCATTTCAAACTAA
GCTGGAATGTCCACGACTTGGCTGTCTATCTATCCATGTTTTATGCTTTA
TTTCCGATTCCGTATTGGGGATTATTCGTGAGCGCTGATTTTGGACGTCA
TGATGAAAAATCAACAGAACAAACGGTCAGCATCTTAACCCTTATCTTCC
GACTATTACGACGTATTCTATACCCCTTAAAAGACTTTCTATCAGAGAGA
AAACATTGGAATACCTTCCTTAACACCATCGCAATCCTACTGGCAATTTC
TGGAGGATTTACAACCATGATGAGTACTCGCTATGAAAAACTCAACATCT
CGTTCAAAGCTAAAGGATCGTTACAAAGAATCGGGGATGATTTTCAAGAG
ATCCACGATAAGATCACTGATGTAGCAAATGGATTTATTATCGTTGCAGC
TAATTTGAATCCGTGTCTGAATTATAACACAAAACCCCCTCATGACggta
aatcaatcaatcaaatacTTACAGATCACGTGACAAAAAAAGGGCGTGAC
GGGCATGACGCAACAATGCTTCAAGGTGGCACCTCCATACTTCAAACGCT
ATATACCAAAGGCGATGATGAGTtcaaaaaacattgcttcaaaACGGTTA
ATAACGATCTCGATTGGAGTGGGAATACTTCAAAATTGTGTAAAAATGTA
AACCAGGTTGCCAAACACAATAATTTCACAATGTCTGCACTACACAATGC
GGAAAATAACTCCGGTAAACATCCTGATTGTAGCAACGCAGACAATTGCC
TCAATTCTTCCAATCATCTCATCCCTAACGAATACACATTATCAATGAAT
AAAGATTGTGAAGCCAAGGCTTGTGGTCTTTTCATCGCAGGAATTGTGGG
TGCTTTTGCAACATCGTTCATCCCGTTCGCTGGTCCAGGCATTGCTAAAG
GTATTCAAATATCGCTTAAAACATACAAACTTATTAAACAGTTTGGTAAA
GTCTTTAAACGTGTTGCAACCCAAGttaaagagaagagaaagaaAATTAG
TAACTTACATaaaattttcagtaaaatcCTTGAATCTGGGACATTGGTTT
TCACCAACAATTATCAGTTCTATTACTTTTTGGTGCCGACCATTTTATTG
TTCCTGATCGCCATCGGGTTAGGATTCTATCGGCGTAAACGACCCAACAA
ATTGAGCAAACGTCTCTTCATTATGTTCTTCTTATTGCTTGGAGTTGTGT
GTGGTGTCATGACCTATCTATCATGGGTTTTCACTGATCTCATGCGAGAG
GTTCTGAAACCTTTCGATACTCTTCTCGCTGTTGAAGTAAAAGAAATGAA
GGGAATGACAATGATTAAAGGTGGTTATTTAATGGCCACTTTGTCTTGTC
TTTTCTTCATTGTATCGGCTATAATGTCAAGAGATGAACCAATGGAACAA
AGAAAACGAAGATTGCCAACAGACCCTGAAACCCAAAGCTTACCACTTGA
ACAGGCTGATCAGCAAGATACAGAATTAGATTTACCAATGCAAGATGCAG
ATTCACCAATAAAGGATGATGATATCATAGAAGTCCCATTGAATAAGACA
GAGAGCCAATTGCAATCAGAtgctgaagaaaatgaagagttAGAAACAAG
GAATGTGCAACTAGCTGAAGACCAGGTGGAAGACCAGCAATCAGGAGATG
GGGATTTAGAAGCAAGGAGTCTACAACTAGCTGAACACCAGGTAGTCCAG
CAATCAAGAGCCCAGAAATCAAAATCACCAAGGAGTTTGCCACCATCCAA
CCGAAAATCGACTCAAAGAAGAAAAGTCGGAGGTAGAACAACAGGACAAA
GGAAGGGAACCAGGAAACCTAAagGTGGTAGAACACGAAATGTGTCTGTG
GAAGATCGATTCTCATCTTGGTTGGTGGCTTTTTCTGTCACAATTCCTGT
CTATTATATCATCTTCACATCATTGACATTCCAAGCACCAGGATCTACAA
CAATGGGAGAGAAATTGATTAATTTAAAGATCACACCATCACCGGCACTT
GAGAAAGTTCGAGTCACTTTTGCGCATACTCATGCCTTAGAAAGGGAATT
TGGTAATGTGGATGATTTCAACTCTGTCACCAATGACAACATATGTGACA
TCACACAAGACATTGTGATCGCTATTATAAAAGGCATGAGTTTTACAATC
CCCAATGTCGATGGCGGTATAACAGAGCTGTTTGATTTAAATACCAAAAT
ACGAAAGGTGGTTGCACAAGTCATTGAGCGCGTTCGAAAAGCTGGTGATC
TCGACATCAACGGTTTCCATTTGTTTGATGGTCACTCCTTCGCTTTGTTG
GATATGCCAGTTAAAATGCttttcaatgtTGTGGTATATTTTCTGCCAAT
CTTTATCACCGCAATCATTACAATCTGTTTCTTGTTATCATTCATTCAAA
TTCTTGGCTTATTCCGACAAAACCTTCGCATCAATCAATTCTTACATTCC
TCTGAACAAATGGTGAGCTCACTCTCCATCTCCGCTCTATCAAACCAACT
GGCCATTATTGGTCTGTTCTCCTTCCTTGATGGATTTTCATCACCAATGT
TTGATTTTACACTGGAAATCGGGCCGCTCCTCAAACATGCTACTTTAGCG
TCAATCCTTTTGATCGTTTCATCGGTTTTCCGAGTATTAACCGACTATGT
ACCGATCGCGAGTGACGAAGCTGATATCATCGGGGATATGATTGATGACG
ATAATGCAGAGGGTCTCGGCGAAGGCGATTGGGGCGATGACGAGGGTGGA
GAAGAGCCTGATCCACCGACTGTTGATACCGAAGTTCCGAAAGGTAGAAA
ACCGCCCGGTAAAGGCGGTAGACAACATACTAGACAACAAATAGTTCAAC
ACAAAGGAAAGAAGTAATGTTTTGTTTGAACTACCAATCAACTACCTGGA
AATTTTATTGAGTAAAGAACACTTAAAAAAAAGAgattcatagaaaaaaa
tacttGAATGACACTAATAACATTTATTACATATAGTAACGCTTAATCTT
TGAAAATAGTTTATTTCGTTTatttcaataaatattttagtagcCAAAGG
TCAGCATTTTGACGCCCTGGATCTTCCTCATCTACATTGAATTTGATATC
TGATGGTGGTTATTTTCACATTATCTAAATTTCACAGCTTTTTATCTTTA
CATTATCTAAATTTCatagctttttaatttttgacagGACTACAGTTAAT
TATACGATTATATTCAACTctttctaatttcaaacttctataattcgaat
ttttctgtaattcaaactgCATCATTGCTCCTATGAACTGACAAGTCGTT
TAAAAtactctgtaattcgaatccttCCCTATTTTGGAGCAAACTTCTGG
TCCCGTAAAAGATCGAAATAAAGAGAGTCGAAT
Run BLAST on NCBI

transcript from alignment at scaffold_441:33592..47920+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00065653 ID=TCONS_00065653|Name=TCONS_00065653|organism=Clytia hemisphaerica|type=transcript|length=14329bp|location=Sequence derived from alignment at scaffold_441:33592..47920+ (Clytia hemisphaerica)
GATTAACTCTCCGTCCAACCGtccaagtttttgaaaatatgatcgcGTGA
GAAGATCTTGATGAGACTGGGTACCAATTAAGAATTAAAAAAGGGTGTAT
ATAATTTGTAAAGAGATGTGCAACTGCTATCAGTCTTTAAACGACTGTAG
ATGAAGTAGTGCGTCGGTTTTGATTTAAAGTCAAGATGCCTTCTGCAGAA
ATAAAGGTAcagtttttatttgtttctttgtttctaTTGAGATTTTATTC
TCCAGTGACCCGGTGAAGATTACTGATGAAATGACTGATGGGTTTGGCCT
ATTTTTAGTTTGGGTGCTAAGTGTGACGTGGAAGGAAATTGACCGAAgat
ttttggtctgtaaaattgatGTTTGCTACGAAGCGGGCAAGTCGTATTCA
CCCTGATCcaaagttatttaaaatttctaatacggccatccgccaaatta
aattcccgccaaaatttcttcctttaatgtatatGCAAGTGAAGTTAACG
GGAAATCCTATTTTGCAACTTTTGGAGTGTTGGTCGGTTTTTAATCCCAA
TTTCGAAAAtccagtttttctttttctcaacttcagttgagctagaatct
cagaatgtttgtttgtgagtttgtgagtttgtttgtccacaaactttggg
gcagcgtaccttattggtatatattttcgcgtNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATAACTCCTTGTGG
TGGGCGGGGAAATTCCCCAATGACCAAAAAATTTCCCAGAAGTGAAGTTC
AACCAACAGGAAGTCTTTCTAggtcaactttgaaaatggtaCTTTCCGGT
GGGGAACCACCTTAAAACTTATGggtagttttttcaatttttttaatttc
gcttttTTTTTCGGGAGTTATCCCCATTTTACTGGGATTTTGCGCTTATT
TAACGTCATAAAAGTctaaataattgacgtcaaatatttttttaaatgct
aaaaatacaaaaatagaaattttcaatcatgttgaaaaacatttgacgtc
aatttatcTAGGTGCCAAAATAAAAGGTTGCTCTGCACacggaaaaaaat
tatttattctaAATTTACCTACGACTGAGTTTTCTCTAATCCTTCTGAGT
ACTCATCGCTCTGGGTTTTATAATTGAACCTTCCCTTTCCTGAGTGCCCA
TCAAAGAAGGCTGTTTTCACCCCGCGTTTGCAATTTAGCTACCTTATCCC
GAGTATCCATCACTCTGGGCTTACAAGCAAGCTTTCCCTAATTCTGAGTG
CCCATCACTCTGGGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNCGAACGCctatcaccctgggtttacaattgAGCTTTCTCTTATCCC
GAGTAACcattaccctgggtttacaatttGACCTTCCTTAATCTCGAGCG
CTTATCACCCTAGGTTTACAACGAAGTTTCTCTTATCCCGAGTAACCGTC
ACCCCTGGTTTACAATAATTGGACCTTCCTTAATCACGAGCGCCTATCAC
CCTGGGTTTGCAACGGCCTTCTATTATGATGAGAGCCCATCACcctgttt
taaaaaagtgtttacaattgggccttccaCTTTCACACGTACACTGAAGT
TGAGCTCAGTGCTTTAGCACGTTACAGTCTTGTGTACATGACTCAACATT
TCTCGAATAGCTAAATATACACTACTGGAGATAATATCAGTAATATTCAA
TTTTGCGAGATAAGACGTGCTTTGTTCCCAATTTGAACGATTTTACACCA
ATCAGGCATATAGCAATATTGTTGAGGCTGCTCGAGGACATGAAAATTAT
ATGATGCTTCGAgaataaaaattttagatgtttttgCAATGGACCAAGAA
GATGCAAATTCCTTCCTATTTTCCACTCCTACTTATCTTACTCAAAGGGT
TCAAAACACATTGAAATACACATATTTGTTTTCTCTGAGCATTTGGTCTT
TGGCTGGCGTGAANNNNNNNNNNNNNNNAAAAatgctaccatttttattt
ACACACGCTACACATGACAAACTCGTTCCCAAACCGTAAGGAAATCCGTT
TCCAACTCCCTTCGTCCGTCGGAAACTTCATTTTTCGACAGTAacaaaaa
atcttccaaaaatttgaacttttgaataaaattattttttgtattcTGCC
TAGGGGTCTAATACGGAAgttcgttttcaaattttagtaaaTGGGTCACC
ACCTGATGACGTTAACATTTATGAAAATGCCGATATTGGAAccgcccata
aattttgctcaaattttgtggGCCAGCTCCATGTAATATTTTTGGGTTAT
AGGATCAATTTTTCGCTACCTACTGGTATTCgcgtattttacagaccggc
caGAAATGGCCTTTTGCCTAGATCAACCCTAGTTTACTGTGTCTAAGGAT
TggaaaatgctattgacttgaaatcttTACAAGTGAGTGTGTAGGCTTAC
AGCCAAAAATTCAGCACAATCAGATAAGTggttatgctgaaagtgagcat
ttcaTGTTATTTTACGGACTGATCTGTGATCTTGACCAAATTGAAATTTA
GCACACTGTCTTAGATTGTCTGTCACAAGTCTTAGCTCAAAGACTGCAGT
AGTTCCTGAGTTCCGACAGGGGTcgatgtgtattttacagaccggtctgc
aaAGAACCAAATACTGATTAGACCATTTTCTTTCCGTTACTAGTTTCTTT
GACAAATAAAAGTAGCCTTTGGAAATCGAACAAGccaatcagtcaataca
tggtcttcccgggggggggggggNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNgatgctccgctggtcagggta
ccttttttaacctccacgagtcccaggtagggtcgcaaaaacaccaaaac
agaaaaatcagtccctcgtagggtgcctttgtttggaaaatttggggaaa
aagtagaaaattttagaaaattttagaaaatttagtaatttcagtcccat
tcagggtcactttttcgcaaatttcgagtcccacgtagggtccatttttc
gaacctcagcggagcaccccagTCGGTcaacaagggtagtaccccccctc
GGGATGGTCTTAttcaaatacactcttttttttataagaatagtgtactt
tggatgggggtaaagtattcttaagaaattgccaaaattgagggtgaaat
attcttaacgtatacttttttattgacttttttacaaacatgagaaatga
tcaatttgagagtttgagACTTTTGAGTGCATATTGCGAGCTAAAATTAT
ATTTATGTCTCAAAGTTCCAGTTTAAGTCTAACAAAAAACCcagtttttt
ttaagcaaatacaaaatgactgtatttttatcaaaatctgtgaatctcac
cctagagggtattttTCTTACGATTTgtccaattttcaccctgatattgt
TATAGAAGATATTTTTATATTGGGCACGAATCCATTAGTATATGCCCCAA
AGATCCTTCCCTTAATAAACAATAAGAAGTTGCCCAAAGGGTTAATAAGC
CCGGTAGGTTggaaatctcaaaaaattaaaaaatgacagGTTAGTTTGAC
TGAATAGTTTCATAATGTTGTATATATTCGACATGTTTTCCATCTATATT
TACAGACATCAAAACCTGGGAACAGGCAAGAACCGCCAGATAATAGTGCA
GGAAAAACTGGGAAAGGCAAGAAGCCAGGAGATAAAACCGTAATCCCTAA
GAAACAAGGAGATAAAACTCCTAAAAAGCCAGGGGATAAAGAAACGCCAG
CGAAACCCACTCCGAAACCGACTCCTATGACAGAAGaggaaaaacgaaaa
ttgcACAACGCTATTCTTCGTACTATCATCCTATTATTTAATGTTCTCAT
TGGTCCAGCTTTAAGATGTTTCATTTTCTTATGCGTCAGTATACAAGTCT
ACGGTGGATACAAAACCATTCAACACTATCAACCAGTCTATGATCCAGAT
TCTAAAACACctgaattttacaaaaatgtgGAATTTATTGCGATGTATCT
TCGAGAAATCATCGAATGTTTGGTTGCCTTTGCACTGCTGACAAGTTTGA
TTGAGAAAAGTAACGGATTTCTTGGTCGACCAGTTAAAGAGAGTTTTTTC
CTGTATTACGAAATTGGTTTCACTTCAGCGTGGACTGGATTAGGATTTTT
CTTTATCATCACATCAAACATCTcagactccaaaaccatccaagTTTTAC
TTGATCAATTTTGCATCAACACTAAAGAAGATTGCCATATGGATATTCTA
TACAAAGTACCAAGCTACACCAGTTTTGGACTTGGTATCATTTGTATGTT
GGTTGGTATTGTTAGAATCATCCTTGGTCTAAATCGTCGTCCTGATCCAG
ATAGCACCCTTCAAGACCCCTCCCCATACAAGCAATGGACACAAATCACA
CCAGTATCCACCAGATTCTTTTTATTCCTCTATTTCATGGTCCTCATCTC
CTCCACAATCTTCGTCGCTGGTTTCCAATTCTTCATGTATTACCACACTG
AAAAGGACATAAAAATCATCAGCAATGTTAACAACATCAAACTTGCCGAT
GATATCTTAACAATCTTAACCCTGAACATATCTCATATCCTTGTTGCTGG
ATTTGTCTTTTTGAGACTGGTCAAAATGTTTTGGTATAAACCCTTCAAAC
CGATAGCTTACCTAACCGCCTTACTGTATCTTTACTCCATTGTCAGCTTT
TTCTCACAATTGGACAAACTACAAAAAGCCTTAAACCATTTCAAACTAAG
CTGGAATGTCCACGACTTGGCTGTCTATCTATCCATGTTTTATGCTTTAT
TTCCGATTCCGTATTGGGGATTATTCGTGAGCGCTGATTTTGGACGTCAT
GATGAAAAATCAACAGAACAAACGGTCAGCATCTTAACCCTTATCTTCCG
ACTATTACGACGTATTCTATACCCCTTAAAAGACTTTCTATCAGAGAGAA
AACATTGGAATACCTTCCTTAACACCATCGCAATCCTACTGGCAATTTCT
GGAGGATTTACAACCATGATGAGTACTCGCTATGAAAAACTCAACATCTC
GTTCAAAGCTAAAGGATCGTTACAAAGAATCGGGGATGATTTTCAAGAGA
TCCACGATAAGATCACTGATGTAGCAAATGGATTTATTATCGTTGCAGCT
AATTTGAATCCGTGTCTGAATTATAACACAAAACCCCCTCATGACggtaa
atcaatcaatcaaatacTTACAGATCACGTGACAAAAAAAGGGCGTGACG
GGCATGACGCAACAATGCTTCAAGGTGGCACCTCCATACTTCAAACGCTA
TATACCAAAGGCGATGATGAGTtcaaaaaacattgcttcaaaACGGTTAA
TAACGATCTCGATTGGAGTGGGAATACTTCAAAATTGTGTAAAAATGTAA
ACCAGGTTGCCAAACACAATAATTTCACAATGTCTGCACTACACAATGCG
GAAAATAACTCCGGTAAACATCCTGATTGTAGCAACGCAGACAATTGCCT
CAATTCTTCCAATCATCTCATCCCTAACGAATACACATTATCAATGAATA
AAGATTGTGAAGCCAAGGCTTGTGGTCTTTTCATCGCAGGAATTGTGGGT
GCTTTTGCAACATCGTTCATCCCGTTCGCTGGTCCAGGCATTGCTAAAGG
TATTCAAATATCGCTTAAAACATACAAACTTATTAAACAGTTTGGTAAAG
TCTTTAAACGTGTTGCAACCCAAGttaaagagaagagaaagaaAATTAGT
AACTTACATaaaattttcagtaaaatcCTTGAATCTGGGACATTGGTTTT
CACCAACAATTATCAGTTCTATTACTTTTTGGTGCCGACCATTTTATTGT
TCCTGATCGCCATCGGGTTAGGATTCTATCGGCGTAAACGACCCAACAAA
TTGAGCAAACGTCTCTTCATTATGTTCTTCTTATTGCTTGGAGTTGTGTG
TGGTGTCATGACCTATCTATCATGGGTTTTCACTGATCTCATGCGAGAGG
TTCTGAAACCTTTCGATACTCTTCTCGCTGTTGAAGTAAAAGAAATGAAG
GGAATGACAATGATTAAAGGTGGTTATTTAATGGCCACTTTGTCTTGTCT
TTTCTTCATTGTATCGGCTATAATGTCAAGAGATGAACCAATGGAACAAA
GAAAACGAAGATTGCCAACAGACCCTGAAACCCAAAGCTTACCACTTGAA
CAGGCTGATCAGCAAGATACAGAATTAGATTTACCAATGCAAGATGCAGA
TTCACCAATAAAGGATGATGATATCATAGAAGTCCCATTGAATAAGACAG
AGAGCCAATTGCAATCAGAtgctgaagaaaatgaagagttAGAAACAAGG
AATGTGCAACTAGCTGAAGACCAGGTACAATCAACGTCATGATATTTTAG
ATTCCCACAACATCTTATAGCcccaaacgatttggaagcgctctagtTTA
ACTTAGGTTGGAAAGGATCTAAAAGTTCAAGAACGGTCCAGGGCTCAGAA
TAAAGCTATAAactctataaacccctccctcCCGAGTTTTTCTCTCGGAC
GAACTTCAAATTTCTAANAAACTAAGCTGGAATGTCCACGACTTGGCTGT
CTATCTATCCATGTTTTATGCTTTATTTCCGATTCCGTATTGGGGATTAT
TCGTGAGCGCTGATTTTGGACGTCATGATGAAAAATCAACAGAACAAACG
GTCAGCATCTTAACCCTTATCTTCCGACTATTACGACGTATTCTATACCC
CTTAAAAGACTTTCTATCAGAGAGAAAACATTGGAATACCTTCCTTAACA
CCATCGCAATCCTACTGGCAATTTCTGGAGGATTTACAACCATGATGAGT
ACTCGCTATGAAAAACTCAACATCTCGTTCAAAGCTAAAGGATCGTTACA
AAGAATCGGGGATGATTTTCAAGAGATCCACGATAAGATCACTGATGTAG
CAAATGGATTTATTATCGTTGCAGCTAATTTGAATCCGTGTCTGAATTAT
AACACAAAACCCCCTCATGACggtaaatcaatcaatcaaatacTTACAGA
TCACGTGACAAAAAAAGGGCGTGACGGGCATGACGCAACAATGCTTCAAG
GTGGCACCTCCATACTTCAAACGCTATATACCAAAGGCGATGATGAGTtc
aaaaaacattgcttcaaaACGGTTAATAACGATCACGATTGGAGTGGGAA
TACTTCAAAATTGTGTAAAAATGTAAACCAGGTTGCCAAACACAATAATT
TCACAATGTCTGCACTACACAATGCGGAACATAACTCCGGTAAACATCCT
GATTGTAGCAACGCAGACAATTGCCTCAATTCTTCCAATCATCTCATCCC
TAACGAATACACATTATCAATGAATAAAGATTGTGAAGCCAAGGCTTGTG
GTCTTTTCATCGCAGGAATTGTGGGTGCTTTTGCAACATCGTTCATCCCG
TTCGCTGGTCCAGGCATTGCTAAAGGTATTCAAATATCGCTTAAAACATA
CAAACTTATTAAACAGTTTGGTAAAGTCTTTAAACGTGTTGCAACCCAAG
ttaaagagaagagaaagaaAATTAGTAACTTACATaaaattttcagtaaa
atcCTTGAATCTGGGACATTGGTTTTCACCAACAATTATCAGTTCTATTA
CTTTTTGGTGCCGACCATTTTATTGTTCCTGATCGCCATCGGGTTAGGAT
TCTATCGGCGTAAACGACCCAACAAATTGAGCAAACGTCTCTTCATTATG
TTCTTCTTATTGCTTGGAGTTGTGTGTGGTGTCATGACCTATCTATCATG
GGTTTTCACTGATCTCATGCGAGAGGTTCTGAAACCTTTCGATACTCTTC
TCGCTGTTGAAGTAAAAGAAATGAAGGGAATGACAATGATTAAAGGTGGT
TATTTAATGGCCACTTTGTCTTGTCTTTTCTTCATTGTATCGGCTATAAT
GTCAAGAGATGAACCAATGGAACAAAGAAAACGAAGATTGCCAACAGACC
CTGAAACCCAAAGCTTACCACTTGAACAGGCTGATCAGCAAGATACAGAA
TTAGATTTACCAATGCAAGATGCAGATTCACCAATAAAGGATGATGATAT
CATAGAAGTCCCATTGAATAAGACAGAGAGCCAATTGCAATCAGAtgctg
aagaaaatgaagagttAGAAACAAGGAATGTGCAACTAGCTGAAGACCAG
GTACAATCAACGTCATGATATTTTAGATTCCCACAAAATCTTATAGCccc
aaacgatttggaagcgctctagtTTAACTTAGGTTGGAAAGGATCTAAAA
GTTCAAGAACGGTCCAGGGCTCAGAATAAAGCTATAAactctataaaccc
ctccctcCCGAGTTTTTCTCTCGGACGAacttcaaatttctaaaagcgag
gaaataacaaaaatttctcACAATATTTTGACGTAGGTGGAAGACCAGCA
ATCAGGAGATGGGGATTTAGAAGCAAGGAGTCTACAACTAGCTGAACACC
AGGTAGTCCAGCAATCAAGAGCCCAGAAATCAAAATCACCAAGGAGTTTG
CCACCATCCAACCGAAAATCGACTCAAAGAAGAAAAGTCGGAGGTAGAAC
AACAGGACAAAGGAAGGGAACCAGGAAACCTAAaggtatttttttaacaa
taatTGGACATGAGTTTCCAGTAACTTTTTACAATGAAATAACTGAACTA
CATGGTtcaattttgtagattttcaaattacATGTTTTAGGTATTTAAAA
GGANGGGGATTTAGAAGCAAGGAGTCTACAACTAGCTGAACACCAGGTAG
TCCAGCAATCAAGAGCCCAGAAATCAAAATCACCAAGGAGTTTGCCACCA
TCCAACCGAAAATCGACTCAAAGAAGAAGAGTCGGAGGTAGAACAACAGG
ACAAAGGAAGGGAACCAGGAAACCtaaaggtatttttttaaacaataatt
GGACATGAGTTTCCAGTACCTTTTTACAATGAAATAACTGAACTACATGG
TTCAATTTTGTCTTAGCATTTAaaaggtttttatttttacatgaattttc
CCGTCTcgtatcagacacatgtttcaaaCCAGGCCGGTGTCAtgtgttct
ggatgggaaataagtggcttcattttccatcaaaaaacTTCGAATCTAAA
ATCGATTAGTAAACCCCTCACAGATCAGTATCCGATGACATTAAGTGGAA
GTAGTGGTATATAtgttaaattctgaaaatattagAATATCGCAAAatta
caatatattttgacgTTGATTGTACTTACATCTTATACTagatttagaaa
atatttacttttttaaccTTTAAGGTGGTAGAACACGAAATGTGTCTGTG
GAAGATCGATTCTCATCTTGGTTGGTGGCTTTTTCTGTCACAATTCCTGT
CTATTATATCATCTTCACATCATTGACATTCCAAGCACCAGGATCTACAA
CAATGGGAGAGAAATTGATTAATTTAAAGATCACACCATCACCGGCACTT
GAGAAAGTTCGAGTCACTTTTGCGCATACTCATGCCTTAGAAAGGTAAAG
TATTCTTTTTTGGTGCGAAATATTGTTCagtcaaaaatgtaaaaaatata
aaggaaGTGGCTCACAGGCATAAGATCTCCAAGAGGTTATTAGAACTAGG
GATTTAAGCTAATGATGCTAAAATTATTAGGAAGTCTATCCCCTTCTATT
TGCGTTAAACTTTGGATATCGAAAATTGTGGTGGAATGTCATCTGCTACT
CCTAATTACTTACCGCCTAGACCAGATTATACAATCTAAAATCTACTCAC
TCGCTGAATTGTATAGGCTTAACAGGTTTTAATTAATAACCCTTGGACTG
ATTGATAAATTCTCTATCGACTGAAATAACCGGGCATCTCTTTAAGTCGG
TGTCTTTTTTGGGTATCTCCTGTTTGAGACAACTTTTACACGagtatttc
aaattattttgagaaaaagagaTAGGATGAAATATCCCGATTTTTTTAGT
CCGGCTTTAATTGGATGAGTTGAACAGCTATACTATTTAAGGACAAATTT
AGGAGTAATCTAGGATGAGAGCATTCTTCTGTGCGGATGGATGAAAAATT
CCACAGTTAATTACTCCTCATCTATAAACGATTCCGTCTCGAAATTATAC
TCTCAAATAGTGTACCATGTAAATTATCAGAAAATGTAAGCAAAATGATG
AAAGGAGTAAAAAAGGatgagatattccaaaaatattgataaaaaacgaG
TTGTCtaaaagaatgttttaaaaactaatagatattattttgaagatgaa
aattatATGATTGTAATAATAAAGAGtgtatctttcagaaaaaagcaATA
TATTCACCGAAAGAGTAGCataggatgaaatatttttttttgtcacccga
aactgaaaattgtggaattcctcatccttttctactccttaaatttaaat
ttgaaaatttatggtATCAACAATAGGTTTCCGAAAGGTTTAGATAATAA
AACTGTTTTAAAAAATGGCCAtaataaaaatcagaaaatcttgattttct
gGAATATTTTATCCCAAACTACTCCGAAATCTATATTATTGGAATCCTGG
AGTCATTTCTGCAAATAATGTctaaaaattcctaaaattgaagaagatat
tacgaaaaagatgattttaaaGATCCCTGAAAAGTCATTCAGGTACATTC
TAAATAAAACACCGACTTAAAGATTTAGATGCTGACAACGCAGAAACTTC
AATTTGTGTTCACGTGGTACGAGAGAGAGGGGAGAAAATTGTTCCGCACC
TTTTATCAAAATATGCTGTATAAGCAAAAACATAAGGTTCTAATGTACTT
CAGAAAATAGTAAACTCTGCGTCCGCAGCCCGGAGGCGACCCAAAGACTT
TACTTTCAATATGTCTTTCTAAGGTAGGGCAGGGCGCCTCTCTTTCTCCC
TGAATTAATTGCTGATTACCAAGCAGAGAGTCATCAAGTAGATTTTTATA
CTATATATTTAAGTACgcgaaatctttggtatgaccgaggattgaaccca
caaccttgggCACCGTGGGCAACCCTGTACCTTTTTTCATTATTGACGCG
ATATTCAAAATTCATTCAATTCACATGAATCTCACACTACTTTATTTGCC
AGGGAATTTGGTAATGTGGATGATTTCAACTCTGTCACCAATGACAACAT
ATGTGACATCACACAAGACATTGTGATCGCTATTATAAAAGGCATGAGTT
TTACAATCCCCAATGTCGATGGCGGTATAACAGAGCTGTTTGATTTAAAT
ACCAAAATACGAAAGGTGGTTGCACAAGTCATTGAGCGCGTTCGAAAAGC
TGGTGATCTCGACATCAACGGTTTCCATTTGTTTGATGGTCACTCCTTCG
CTTTGTTGGATATGCCAGTTAAAATGCGTATGATTTTTGCTTTATTTATG
TTCTATAGTGGACTAGCCCATTTGAACTTCAATTTAAGGAATACAGTTGA
CCCTCTTTAATTCGGTTTTCAAGATGAATTTGGTTTCGATCGAGAGTTTC
TTCTCGACGGTGGATTTCAATATCATCGAATAaaggagcctatcgaatag
tagtacgtcgaattagagagcatcaactgtatacAATATTCTGATcattc
gaactaattctcagtttCTGTCAATTGACCAATTCTCTGTGATATCAGTA
TATTTTGGTTGGTAAAACTATAACAAAATACAGAATAATGGAGACAAATC
CCCCAGTTTGCATGTCTTGCTCACCTTTATTTTTCTGTAATTGGAATCCC
TCATTAGTTGACaattattataataaaaaaatctttttaaagcgTTGACA
ACGCTTTATTTCAATTATCCATATTTCTTATGATTTTGGGATAGATTAAA
CAGGCACTTATATTCACTACGAAGATTTTCCTGagattttcttgtatttt
tatgatctttttcagttttcaatgtTGTGGTATATTTTCTGCCAATCTTT
ATCACCGCAATCATTACAATCTGTTTCTTGTTATCATTCATTCAAATTCT
TGGCTTATTCCGACAAAACCTTCGCATCAATCAATTCTTACATTCCTCTG
AACAAATGGTGAGCTCACTCTCCATCTCCGCTCTATCAAACCAACTGGCC
ATTATTGGTCTGTTCTCCTTCCTTGATGGATTTTCATCACCAATGTTTGA
TTTTACACTGGAAATCGGGCCGCTCCTCAAACATGCTACTTTAGCGTCAA
TCCTTTTGATCGTTTCATCGGTTTTCCGAGTATTAACCGACTATGTACCG
ATCGCGAGTGACGAAGCTGATATCATCGGGGATATGATTGATGACGATAA
TGCAGAGGGTCTCGGCGAAGGCGATTGGGGCGATGACGAGGGTGGAGAAG
AGCCTGATCCACCGACTGTTGATACCGAAGTTCCGAAAGGTAGAAAACCG
CCCGGTAAAGGCGGTAGACAACATACTAGACAACAAATAGTTCAACACAA
AGGAAAGAAGTAATGTTTTGTTTGAACTACCAATCAACTACCTGGAAATT
TTATTGAGTAAAGAACACTTAAAAAAAAGAgattcatagaaaaaaatact
tGAATGACACTAATAACATTTATTACATATAGTAACGCTTAATCTTTGAA
AATAGTTTATTTCGTTTatttcaataaatattttagtagcCAAAGGTCAG
CATTTTGACGCCCTGGATCTTCCTCATCTACATTGAATTTGATATCTGAT
GGTGGTTATTTTCACATTATCTAAATTTCACAGCTTTTTATCTTTACATT
ATCTAAATTTCatagctttttaatttttgacagGACTACAGTTAATTATA
CGATTATATTCAACTctttctaatttcaaacttctataattcgaattttt
ctgtaattcaaactgCATCATTGCTCCTATGAACTGACAAGTCGTTTAAA
AtactctgtaattcgaatccttCCCTATTTTGGAGCAAACTTCTGGTCCC
GTAAAAGATCGAAATAAAGAGAGTCGAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041138XLOC_041138Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065653-exon-scaffold_441-1491911889:33592..33797TCONS_00065653-exon-scaffold_441-1491911889:33592..33797Clytia hemisphaericaexon
TCONS_00065653-exon-scaffold_441-1510915933:33592..33797TCONS_00065653-exon-scaffold_441-1510915933:33592..33797Clytia hemisphaericaexon
TCONS_00065653-exon-scaffold_441-1575043694:33592..33797TCONS_00065653-exon-scaffold_441-1575043694:33592..33797Clytia hemisphaericaexon
TCONS_00065653-exon-scaffold_441-1491911889:38497..41265TCONS_00065653-exon-scaffold_441-1491911889:38497..41265Clytia hemisphaericaexon
TCONS_00065653-exon-scaffold_441-1510915933:38497..41265TCONS_00065653-exon-scaffold_441-1510915933:38497..41265Clytia hemisphaericaexon
TCONS_00065653-exon-scaffold_441-1575043694:38497..41265TCONS_00065653-exon-scaffold_441-1575043694:38497..41265Clytia hemisphaericaexon
TCONS_00065653-exon-scaffold_441-1491911889:43328..43526TCONS_00065653-exon-scaffold_441-1491911889:43328..43526Clytia hemisphaericaexon
TCONS_00065653-exon-scaffold_441-1510915933:43328..43526TCONS_00065653-exon-scaffold_441-1510915933:43328..43526Clytia hemisphaericaexon
TCONS_00065653-exon-scaffold_441-1575043694:43328..43526TCONS_00065653-exon-scaffold_441-1575043694:43328..43526Clytia hemisphaericaexon
TCONS_00065653-exon-scaffold_441-1491911889:44216..44435TCONS_00065653-exon-scaffold_441-1491911889:44216..44435Clytia hemisphaericaexon
TCONS_00065653-exon-scaffold_441-1510915933:44216..44435TCONS_00065653-exon-scaffold_441-1510915933:44216..44435Clytia hemisphaericaexon
TCONS_00065653-exon-scaffold_441-1575043694:44216..44435TCONS_00065653-exon-scaffold_441-1575043694:44216..44435Clytia hemisphaericaexon
TCONS_00065653-exon-scaffold_441-1491911889:46044..46318TCONS_00065653-exon-scaffold_441-1491911889:46044..46318Clytia hemisphaericaexon
TCONS_00065653-exon-scaffold_441-1510915933:46044..46318TCONS_00065653-exon-scaffold_441-1510915933:46044..46318Clytia hemisphaericaexon
TCONS_00065653-exon-scaffold_441-1575043694:46044..46318TCONS_00065653-exon-scaffold_441-1575043694:46044..46318Clytia hemisphaericaexon
TCONS_00065653-exon-scaffold_441-1491911889:46857..47920TCONS_00065653-exon-scaffold_441-1491911889:46857..47920Clytia hemisphaericaexon
TCONS_00065653-exon-scaffold_441-1510915933:46857..47920TCONS_00065653-exon-scaffold_441-1510915933:46857..47920Clytia hemisphaericaexon
TCONS_00065653-exon-scaffold_441-1575043694:46857..47920TCONS_00065653-exon-scaffold_441-1575043694:46857..47920Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_441supercontigscaffold_441:33592..47920 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.32905	0.22352	0.0519221	0.012561	0.104489	0.176976	0	0.000486354	0.129676	0.156049	0.140757	0.29963	0.708115	0.0469878	7.69669	4.46996	0	0.000180316	0.439581	5.8942	0	0.0568966	1.81311	2.24367	0.015778	0	0	0.0404078	0.0514131	5.70044e-09
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00065653 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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