TCONS_00065665 (transcript) - C. hemisphaerica

Overview
NameTCONS_00065665
Unique NameTCONS_00065665
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length562

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00065665 ID=TCONS_00065665|Name=TCONS_00065665|organism=Clytia hemisphaerica|type=transcript|length=562bp
TTTCGCCAGaagggtagttgaacccgactgtttGTTCGTCTTTCAAACTA
AAATGGTAGACGATAGCTGCGATAGAAAAACTTGAACTTTTTGATCTCTA
AGTTTAACTAAATTTAAGCCACAAAGCAGTGGAATATTTAGTTCAGTTAG
CAATTATGTCAAACTCGCTGTACTTGGAGCATTATCTGGAAAGTATTGAA
AGTTTACCTTACGATCTGCAAAGAAATTTCTCTCTTCAAAGAGATTTGGA
TCAAAGAGCACATGATCTCCTTGATGATATTGACAAGCTTTGTGAAGAAT
ACATTTCAAAAGTGAGGGATCTATTGCCAGCTGAAAGGAAAGAATACTTC
ACAAAGATTGAAAATGCCTTTCAAAAGAGTCGAGAATACGGTGATGACAA
GGTTCAACTTGCTGTTCAAACTTATGAGATGGTAGACAAACACATCCGAA
GACTTGACTCAGACTTGTCAAGATTCGAAGAAGAATTAAAACAACAACga
caacagcaacaacagcaGGGAAATGCTGAAGAAGGTGCTGTCATTGTTTT
TACTGCaaaagc
Run BLAST on NCBI

protein sequence of TCONS_00065665-protein

>TCONS_00065665-protein ID=TCONS_00065665-protein|Name=TCONS_00065665-protein|organism=Clytia hemisphaerica|type=polypeptide|length=135bp
MSNSLYLEHYLESIESLPYDLQRNFSLQRDLDQRAHDLLDDIDKLCEEYI
SKVRDLLPAERKEYFTKIENAFQKSREYGDDKVQLAVQTYEMVDKHIRRL
DSDLSRFEEELKQQRQQQQQQGNAEEGAVIVFTAK
Run BLAST on NCBI

transcript from alignment at scaffold_442:94438..107689+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00065665 ID=TCONS_00065665|Name=TCONS_00065665|organism=Clytia hemisphaerica|type=transcript|length=13252bp|location=Sequence derived from alignment at scaffold_442:94438..107689+ (Clytia hemisphaerica)
TTTCGCCAGaagggtagttgaacccgactgtttGTTCGTCTTTCAAACTA
AAATGGTAGACGATAGCTGCGATAGAAAAACTTGAACTTTTTGATCTCTA
AGTTTAACTAAATTTAAGCCACAAAGCAGTGGAATATTTAGTTCAGTTAG
CAATTATGTCAAACTCGCTGTACTTGGAGCATTATCTGGAAAGTAagtta
tttgatttttcatcCATAAATTTGGAAGTCGACATGGGTTTTGCAGAAAG
AAAGGGACTGACATACTACCTTTTACTACCTCTACTTTTAGTTTTACAAC
TTTTAGTCTATTTAGTTTTGGTTGAAAGActatatcatccaccaggatgc
aagtaTATGATCCTGTAGGGATCtatgtaggggcaccggtagggttggga
gctttcttaattaaggtctgtaaattaacacgctatatatatataaatat
tcGTGTCTCGACTCGTTGACGCAAGCGGTTTTAGGCaatgggtttgtaaa
ccaaaaGGTTGCTAGTCCAGGAGCTGGaactcaactactttttgccttta
ctaATTCTGCTGGGGGAAAAAGTAGAGAGTCCAGTGGAACCCACAAATTA
TGTAACTGAAACTATTAACTGTcacaccaaatttgaatttaaaaccaatC
AGAATTCCCTCTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNGGTtgtaccgtgaaaaagggtaa
cttgcatcagtggaggctaacatgcatagccctcaaatgaatgacctggc
tggtcattaaaatacaactacgcagctgcGCTCGCAGcactactctacca
tttttgttttgatttatttttgtattttaatgaccagctgggtccttcat
ttgagggctatgcatgttagcctccaatgatgcaagttaccctttttcac
ggtatcTACTAAAGATCtatatttcaaacaaaatcaagatattgagagga
tatttaaaaaaagccgTGCAACCACGAAActctctctattttgtttttaa
cacaGGGAATGAGAGAGCATTCTATTCAATATACTTTTTGCCGTATTAGC
GTAGAAATTACACTCCAACGTAGATAAAAGATAAAATAGATAATTATAGG
AGGACAGCCGTATGAAAAAGAAAGCGAGTATACATATTACCATATTAGCA
ACATCATCgaatattactttttcttaatgGCAAAAGNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAA
TGGCAAAAGGAAAGACTTCCATTATTTTCTCAATGTGATTAGATTGGTTT
TCTTCTTTAAGATCTTCACTGTAGAATTGCTTCATAAACTTTCAGATTTA
TAGATTTTGTTTTGAACGGCAGTTAGTCAAAATCAATAATTAAGCTGTGG
TTTTCCTCACtaagataaaaacattatttaaagacaaacaatacggtcat
ttttttttaaattaaaaaaccaTGGATATTGcgcaattttgaattatttt
caaaagttgacgCATGCGTCGACAGAAAACTGTCGAGGGGTTCCCTCTGA
CGTCCTATcgcagcgccatcattcaaatcagaaagcaaagATAGTTGCGG
CAGATTTTGTGACTaaaaggttgcttgcatttggtggttcaaGCTTGGGT
CAAGTCAGTCTCTTTTGCAATGCTGGAAaagctaacctgataacagctgt
tcataattttcatacgtgcacggtaaacctctgaaggcacttgaaaatta
tacatctgaggcaATACTCCTCCCGcccaaaattttacaacaagaatctt
gttgtgcgccagaaagtcaaaaactgatacggcgccctattcaacgaccc
acggcatggcccgaacatgttcgggcctcttgattaaaatactttttaaa
aatggcccgcgCGTGGCCCGCGCacagtttcggaccatgttcgggccaga
ttttcgaaaacttgctacgatcgcgcgtgtaatttcaggacccgaacatg
ttcgggccatgccgtgggtcgtcctattcataaacacaatcacgcaactt
tgttgtcattcctagtccttttagacgaacgcggtccttacgattttgag
attgcatattcgtcagattgtaccgtgagtggtcctaaatccgatagccc
tgcctaaatccgatggggtctttcaaagatacaaactaaaataaaaacga
acctttcgctgtgacgcaatgaagataccaataAGTGTCAACtgaactga
gagatttgatacactgaaccaattgaaccaagtaacaataattgcttctc
atacaaaacataatttcttattacgccggtttagctgtttgctgaatgca
tttaaagtcctttgagatgttgggaaggtggcttaaacacgatgaaatca
aaattaaagggaaaaattctcttcaaagtttgactctatccctcccgggt
gacgtatcttttaaccatattttgaaaaagatttttgtggcaaaaataat
cagaaaacagaaagggcatcattcccaaattacaccataccggcgatcAG
CAACGTACGAGAcagctctgcaattagattttttttctcgcttcgctcgt
gttatatttgccgtagttcttgatgtttaggaaaactttgatgtcaagat
aagcggagtgaaataatagacatgacacgagattcgtcgaaaaaatgCAG
CCCGGGgtagggggtacttaggcaagagaagggtatgtgTATGTGCTGGC
CTTaaaggtgccttttttgaaacatggcagtttgaaaaatcagaaaatca
aacttcagtcccactaagaattggaaaaataggaaaatttcaactttttg
cccccagaaagatagaaatttggtcaaattagtNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNccccccggaag
gcagctaggacacgcagacaaaaaagcatgatagcgcaattttatgttgt
tttttataaaataacttcgtaaTAACTtcagtaatttttcaaattcaaca
atgacttagatttacagcaaaataattatcgacatacatgtttaaaggtc
ccttttttactttttacgaagaaagaattctagtttttacctccttttga
atgtatttttaatgttgctgttctagcaaacttgttatgtgattcttgtg
ttttattttatatttgttcttttctttaacataacagattctttttaaaa
gattttcttttgttttgaaaagaatNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgttaattacatt
cgaaaacataaaacaaaagaaaagaaagaaaaaaaagaaaaagtctaatc
tatcaatcaaaacaaagtctttataaaacggtgcgaatctgatttaacac
ttttgtggagcaagaagcaaaagtcatcttttaaaagaacaaaaacattg
cgtacgaaaacgaaagtagcacagacagaaagaaagaaagaaagacagac
aaaacgacatacagactaccgctattaatatatagattgttaccgtgagt
ggtcctaaatccgacagtcctgcctaaatccgacccccccccaaataatt
gctatgaaaaaaaattatacgtttacaaacattccctctccaagttgaac
aataaactattgcaagagctCTTGAAATAAAACACTGAACAAGATTACTA
TAATgccaagatgtcaattaatgtgataaaaaaagtctgagttgtaaaaa
taattacctgtaattattctgaatctgttattcgtgtttaaaacgttaac
aattttgtaataagaaattatgttttgtatgaGAAGCAAtaattgttatt
tggttcaattggttcagtgtatcaaatctctcagtttagttgacactttg
gtatcttcattgacattgtgtcacagcgaaaggtttgtttttatgttagt
ttgtatctttgaaagaccccatcggatttaggcagggctgtcggatttag
gaccactcacggtaacgttttaaacatgaataacagattcagaataatta
gaggtaattatttttacaactcacacttttttgatcacataaTTGACATC
TTGGCATTATAGTAATCTTGTTAAGTGTTTTATttcaagagttcttgcaa
tagtttattgttcaacttggagagggaatgtttgtaaacgtataattttt
tttcatagcagttatttggggggtcggatttaggcagggctgtcagattt
aggaccactcacggtataccgtgagattgggtaacttgcatcagtggagg
ctaacatgcatagccctcaaatgaaagacctggctggtcattaataTACA
AAgttatatcaaaacaaaaatggtagagtagagctgcgagcggagctgcg
tagttgtattttaatgatcagccaggtcattcatttgaaggctatgcatg
ttagcctccactcatgcaagttacccaatctcacggtatgttttcaccca
tccctttagagcttcagcatggtgggcagaaaacaaccacaatctgatct
caggttaggaaAAACTGAATTCATCAGCTTTTCTTGAAATGTTTTCCCTT
TAACTTCCCTGAATGATTTGACAGAACTCCAATGGAAATCAAgactataa
agtgcactcacAAACATTAATTTGTCAGATGTAAAAAATCAACAACGTTA
CTGTCATCAAATGACAATcgaacaaaggattttctgtcaagaacgttata
aacattccaacaactttcaTGGAAATGATCTGCCCCAGATAGGTTCTACC
AGGGTGAAATGTCTGATATTCTTGCAGAGATATGATAGCAATATAAAGAT
ATTAGACATGGAGAGTACTAGAAGTTCATTCAGCTATGATAGTCTCTATA
ATGTACAAACGTTATTAAATTAATGATTTTAAGGGATTAGAACatcttta
aaaagcttttttcctgattatattttcataatttgaatattttaaaaccC
AGCAGACtcaagcatcaaaataatgacagtaaaaaaaatagtattttaag
gtttctttttgaaaaaaattagtatTCATATTTTGTATCCATCCTCATAT
GGATAGgctggacgaacatttccagggggtaatccaagtccaagaaaaat
ttctaaaggttttttttcctttttccagggggtaaaagttgtattctaaa
atttaaaaaggcatgaaaagaatttttcatgaTAAGGTTTtgtttccaaa
ttttgccattttcgagaGGGTATCCATAAATTTCCAAGAATTGTTTTTGA
CTCGAGAAGGTTCGTCCACCTCCCTGTATGAATATTTTATGGAACAGAGg
tattgacaaatttttttcactaTAATAACCCccttgaaaaatctgaaaaa
tgaacaagaaccccttggaaaatcaaggctcagaccccctggaaaagttt
gtcaatatTTCAAacctgtatggtttaaaaatggaatagcctaTTGTTGC
TAATAAAAACTAAtctttttatttatataaagctaaaacaaactttttcg
acacacttattcaaaatttcagaattcttatgtttaaaaacttttgatCA
ATTGAATGACATGGCCCATTAAAGAAAgataagaataaagaaatataata
tcaaaaaCAATTGATTCAAaggttgtttttgtttttcaaaaatctgcaTG
TTTTCAGAAATGACATCAATTACAGTTCATAGTGTCAGCCCTCCCTCCTG
GTTGGGCGGTTACACCctaaatttttctcaaaaaaggagtaggctggaag
tacaccacttttttgggggacctatgtacttgggagagctaaaatctcat
cacttagTGTGGAGGCTAAATAGTTGGCTTCgattactcaaattgaagct
catgaatctgaaatatttgtataaaaagtgtgcaaaatatttttatactt
aaactgaacgcaatttacattggaaaacccttttttactggatcaatttt
ttgaaagtgtttagagtcaaaagtcctgggggctaacaaaaaattcataa
atcttttgggggacttaaaactcaggggtgacctaatttttgcctgggac
ctaaacccagtcTGACGCTATGAGTTTCCCGAATCTTACAATGTTTTAAG
TTGTTTTCTTTCCATTTTAGGTATTGAAAGTTTACCTTACGATCTGCAAA
GAAATTTCTCTCTTCAAAGAGATTTGGATCAAAGAGCACATGGTATGTTT
GTGTTGTATTATTGTTTTTACATTATTGTtccctttttcatttttatcac
tCATTTTAATCTTTAAACAATGAATGAAAAAGAGGTCTTcggttaaaatt
tttgttttgaaatcaagcCTTGTGCTCTGAATATTTTAAatgcttttcta
tttttcttctttttttgaaagtcGCATTATTTTTCTGGACccttgaaatc
gaaaaattttctggaaagtTCTTGAAAAGTCCTGGGTAGATACAGTGTAG
ATATGACAAAAAGTCGAACTTATTCGTTTTAAcgtctttgaaaaaaaaaa
tctgttggACAGAGGCACTTATGCGAAATATATGTTACTATTTTGGGATA
ATGACAAAAGTATTGCAACGATTTTGCTTTGTTCGTTATACGTTCAAACT
AAAAACACGagaataaaaatatacaaagtaACTTGACATATTTACATACA
TAGGCCTATGTTAGTCGTCGGTTAGTCAGTCAAAATATATACAAGTAAAA
AATGTACAAGCTATAATTAAAGTCTGAGCCAAAATCTAAGTCAAAACCTA
AGTCAAATAATGTGTCCAAAAATAGAGAAGATTGCAAAAAATAACATAGA
AAAATATGTacaaactagccggtacccggcgtcgcacgccggtttagctg
tttgctgaacgcatttaaagtcctttgagatggtgggaaggtggcttaaa
cacgatgaaatcaaaattttaaagggaagaattctcttcaaagtttgact
ctatccctcccgggtgacgtatcttttaaccatattttgaaaaagatttt
tgtggcaaaaataatcagaaaacagaaagggcgtcattcccaaattacac
cataccggcgaccagcgacttccgagacggctctgcaattggattttttt
tctcgcttcgctcgtttatgccgtagttcttgatgtttaggaaaactttg
atgtcaagataagcggagtgaaataatagacatgacacgcgattcTTCGA
AAAGAGgcagcccgggggagggggtacttaggcaagagaagggtatgggt
atgtacCGGCATTaaaggtgccttttttgaaacatggcagtttgaaaaat
cggaaaatcaaacttcagtcccactaagaattggaaaaataggaaaattt
caactttttgccNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNattagttccaaa
aagtgaattaaaattcacacaatttcccttgtttcttctcctctttattc
tgctaagggtccgaggggcagggccgaaagtcagctcgcaaccacaGTCT
CCCCGGAAgacagctaggacacgcagacaaaaaagcgtgatagcgcaatt
ttatgttgctttttataaaataacttcgtcataacttcaataaatttttt
aattcaacaatgacttagatttacagcaaaataattatcgacatacatgt
ttaaaggtccctttttacgaagaaagaattctagtttttaccgccttttg
attgtatttttaaTGATGCTGTTCTAACAAACGtgttatgtgattcttgt
gttttattttatatttgttcttttctttaacataacagattctttttaaa
agattttcttttgttttgaaaagaattcgaatgtctcaaatcaaaatata
acaAGACGAcatgaagtcgaaaatttcgcctagaatttgaaccgcatggg
aaaaagaagaagtagagattaaagctaatctgaaatctactttacatcNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNTGATTCTTATAacgtatatgcttataagaaa
aataaatatgctcatattgtttgctgtcccttgtttactttgtaagaaat
aatcaccgaaaggtatatcaccgtctatcaagagttattgagttgattct
tataaagtatatgcttataagaaaaataaatatgctcatattgttcgcca
tccctcgtttactttgtaagaactaataaccgaaagatatatcaccgtct
atcaagagttattgagctgattcttataaagtatatgcttataagaaaaa
taactatgctcatattgttcgccatccctcgtttactttgtaagaactaa
taaccgaaagatatatcaccgtctatcaagagttattgagctgattctta
taaagtatatgcttataagaaaaataactatgctcatattgttcgccatc
cctcgtttactttgtaagaactaataaccgaaagatatatcaccgtctat
caagagttattgagctgattcttataaagtatatgcttataagaaaaata
actatgctcatattgttcgccatccctcgtttactttgtaagaactaata
accgaaagatatatcaccgtctatcaagagttattgagctgattcttata
aagtatatgcttataagaaaaataactatgctcatattgttcgccatccc
tcgtttactttgtaagaactaataaccgaaagatatatcaccgtctatca
agagttattgagctgattcttataaagtatatgcttataagaaaaataac
tatgctcatattgttcgccatccctcgtttactttgtaagaactaataac
cgaaagatatatcaccgtctatcaagagttattgagctgattcttataaa
gtatatgcttataagaaaaataactatgctcatattgttcgccatccctc
gtttactttgtaagaactaataaccgaaagatatatcaccgtctatcaag
agttattgagctgattcttataaagtatatgcttataagaaaaataacta
tgctcatattgttcgccatccctcgtttactttgtaagaactaataaccg
aaagatatatcaccgtctatcaagagttattgagctgattcttataaagt
atatgcttataagaaaaataaatatgctcatattgtttgctgtcccttgt
ttactttgtaagaaataattaccgaaaggtatatcaccgtctatcaagaa
ttattgagttgattcttataaagtatatgcttttaagaaaaataaatatg
ctcatattgttcgccatcccttgtttactttgtaagaactaattaccgaa
agatatatcaccgtctatcgtgagttattgagttgattcttataaagtat
attcttataagaaaaataaatatgctcatattgttcgccatcccttgttt
actttgtaagaactaattaccgaaaggtatatcaccgtccatcaagagtt
attgagttgattcttataaagtatatgcttataagaaaataaataaaaaa
acaatcagTTATATGCTTAAATTTATGGAATTAATATTCGAGCAAAAAAA
ACGCGACTTATGATTATCTCCATAGTATACTGAACCAACTAACCAGAGAA
CGCCCGGGTCAAACGCCAACGCCATAATCTTCGCCCCAAAAAAATTCTCC
cccgccgccgccgcagaaaggctatcgtaatactttcNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGTTAATTA
CAtttgaaaacataaaacaaaagaaaagaaagaaaaaaaaagaaaagaaa
aagtctaatctatcaatcaaaacaaagtCTTTATAAAACGGCACGAATAT
cgttaaacaaatttgtggagcaagaacaaaataaaagtcatcttttggaa
gaacaaaaacattgcgtgcgaaaacgaaagtagcgcagacagaaagaaag
aaagacgacaaaacgacatacagactaccactATTAATATGTAGATAGAT
ACTTACAAAATGTTGTCGGCAAACTatcccaaaaaaaaacaaataagacT
TGACTTGACTTGATTTGATATCACATTTTCTTCACTAAAAGTCATTTTTC
TCTCAGCTTTCTTGTGTCGTGTCAAAAATTGAGTGTGACAAAAAAAAGAC
gattttttctactttaaaaaacaattaaaaagtaattatcTGAGAGCAAC
ATATGCCAAACCACTCCGACGGAGAGCCACTTGGGAGTTTTAACCAAAAC
AGTTACTTTGTATTATTTAGATCTCCTTGATGATATTGACAAGCTTTGTG
AAGAATACATTTCAAAAGTGAGGGATCTATTGCCAGCTGAAAGGAAAGAA
TACTTCACAAAGATTGAAAATGCCTTTCAAAAGAGTCGAGAATACGGTGA
TGACAAGGTTCAACTTGCTGTTCAAACTTATGAGATGGTAAATATGACTT
TGTAATTAGTCATAATACTAACATTAATTGTTGGTGTACCAAAGCTAACA
AAAATGGAGCATTTGCTTCATGATGTTTTGTTTTATAGATATTTATAGTA
TCTTGATGAAATTACAATCTTCTGATCTAAGGCcaaatgttaaaatttca
aattagaaatGATATGTGATAAAAAGTCTATTTCTACAGTCCTCCATTTT
AAAACGTTTCATTACCTACAGGTAGACAAACACATCCGAAGACTTGACTC
AGACTTGTCAAGATTCGAAGAAGAATTAAAACAACAACgacaacagcaac
aacagcaGGGAAATGCTGAAGAAGGTGCTGTCATTGTTTTTACTGCaaaa
gc

Coding sequence (CDS) from alignment at scaffold_442:94438..107689+

>TCONS_00065665 ID=TCONS_00065665|Name=TCONS_00065665|organism=Clytia hemisphaerica|type=CDS|length=1620bp|location=Sequence derived from alignment at scaffold_442:94438..107689+ (Clytia hemisphaerica)
ATGTCAAACTCGCTGTACTTGGAGCATTATCTGGAAAGTATTGAAAGTTT
ACCTTACGATCTGCAAAGAAATTTCTCTCTTCAAAGAGATTTGGATCAAA
GAGCACATGATCTCCTTGATGATATTGACAAGCTTTGTGAAGAATACATT
TCAAAAGTGAGGGATCTATTGCCAGCTGAAAGGAAAGAATACTTCACAAA
GATTGAAAATGCCTTTCAAAAGAGTCGAGAATACGGTGATGACAAGGTTC
AACTTGCTGTTCAAACTTATGAGATGGTAGACAAACACATCCGAAGACTT
GACTCAGACTTGTCAAGATTCGAAGAAGAATTAAAACAACAACgacaaca
gcaacaacagcaGGGAAATGCTGAAGAAGGTGCTGTCATTGTTTTTACTG
CaaaaATGTCAAACTCGCTGTACTTGGAGCATTATCTGGAAAGTATTGAA
AGTTTACCTTACGATCTGCAAAGAAATTTCTCTCTTCAAAGAGATTTGGA
TCAAAGAGCACATGATCTCCTTGATGATATTGACAAGCTTTGTGAAGAAT
ACATTTCAAAAGTGAGGGATCTATTGCCAGCTGAAAGGAAAGAATACTTC
ACAAAGATTGAAAATGCCTTTCAAAAGAGTCGAGAATACGGTGATGACAA
GGTTCAACTTGCTGTTCAAACTTATGAGATGGTAGACAAACACATCCGAA
GACTTGACTCAGACTTGTCAAGATTCGAAGAAGAATTAAAACAACAACga
caacagcaacaacagcaGGGAAATGCTGAAGAAGGTGCTGTCATTGTTTT
TACTGCaaaaATGTCAAACTCGCTGTACTTGGAGCATTATCTGGAAAGTA
TTGAAAGTTTACCTTACGATCTGCAAAGAAATTTCTCTCTTCAAAGAGAT
TTGGATCAAAGAGCACATGATCTCCTTGATGATATTGACAAGCTTTGTGA
AGAATACATTTCAAAAGTGAGGGATCTATTGCCAGCTGAAAGGAAAGAAT
ACTTCACAAAGATTGAAAATGCCTTTCAAAAGAGTCGAGAATACGGTGAT
GACAAGGTTCAACTTGCTGTTCAAACTTATGAGATGGTAGACAAACACAT
CCGAAGACTTGACTCAGACTTGTCAAGATTCGAAGAAGAATTAAAACAAC
AACgacaacagcaacaacagcaGGGAAATGCTGAAGAAGGTGCTGTCATT
GTTTTTACTGCaaaaATGTCAAACTCGCTGTACTTGGAGCATTATCTGGA
AAGTATTGAAAGTTTACCTTACGATCTGCAAAGAAATTTCTCTCTTCAAA
GAGATTTGGATCAAAGAGCACATGATCTCCTTGATGATATTGACAAGCTT
TGTGAAGAATACATTTCAAAAGTGAGGGATCTATTGCCAGCTGAAAGGAA
AGAATACTTCACAAAGATTGAAAATGCCTTTCAAAAGAGTCGAGAATACG
GTGATGACAAGGTTCAACTTGCTGTTCAAACTTATGAGATGGTAGACAAA
CACATCCGAAGACTTGACTCAGACTTGTCAAGATTCGAAGAAGAATTAAA
ACAACAACgacaacagcaacaacagcaGGGAAATGCTGAAGAAGGTGCTG
TCATTGTTTTTACTGCaaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041146XLOC_041146Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065665-exon-scaffold_442-1491911889:94438..94629TCONS_00065665-exon-scaffold_442-1491911889:94438..94629Clytia hemisphaericaexon
TCONS_00065665-exon-scaffold_442-1510915933:94438..94629TCONS_00065665-exon-scaffold_442-1510915933:94438..94629Clytia hemisphaericaexon
TCONS_00065665-exon-scaffold_442-1575043694:94438..94629TCONS_00065665-exon-scaffold_442-1575043694:94438..94629Clytia hemisphaericaexon
TCONS_00065665-exon-scaffold_442-1491911889:101958..102029TCONS_00065665-exon-scaffold_442-1491911889:101958..102029Clytia hemisphaericaexon
TCONS_00065665-exon-scaffold_442-1510915933:101958..102029TCONS_00065665-exon-scaffold_442-1510915933:101958..102029Clytia hemisphaericaexon
TCONS_00065665-exon-scaffold_442-1575043694:101958..102029TCONS_00065665-exon-scaffold_442-1575043694:101958..102029Clytia hemisphaericaexon
TCONS_00065665-exon-scaffold_442-1491911889:107158..107324TCONS_00065665-exon-scaffold_442-1491911889:107158..107324Clytia hemisphaericaexon
TCONS_00065665-exon-scaffold_442-1510915933:107158..107324TCONS_00065665-exon-scaffold_442-1510915933:107158..107324Clytia hemisphaericaexon
TCONS_00065665-exon-scaffold_442-1575043694:107158..107324TCONS_00065665-exon-scaffold_442-1575043694:107158..107324Clytia hemisphaericaexon
TCONS_00065665-exon-scaffold_442-1491911889:107559..107689TCONS_00065665-exon-scaffold_442-1491911889:107559..107689Clytia hemisphaericaexon
TCONS_00065665-exon-scaffold_442-1510915933:107559..107689TCONS_00065665-exon-scaffold_442-1510915933:107559..107689Clytia hemisphaericaexon
TCONS_00065665-exon-scaffold_442-1575043694:107559..107689TCONS_00065665-exon-scaffold_442-1575043694:107559..107689Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065665-proteinTCONS_00065665-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_442supercontigscaffold_442:94438..107689 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
40.3019	37.8306	15.9313	13.6937	40.2538	32.2375	33.0786	36.2903	30.828	28.0097	23.0121	26.707	22.6593	20.8247	16.0935	20.333	33.4987	32.5565	17.3077	19.2292	32.65	31.7088	49.3207	45.9921	25.0342	31.2024	17.7775	15.4429	24.095	27.0494
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR024610ING_N_histone_binding
Blast
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BLAST of TCONS_00065665 vs. Swiss-Prot (Human)
Match: ING5 (Inhibitor of growth protein 5 OS=Homo sapiens GN=ING5 PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.482e-42
Identity = 71/112 (63.39%), Postives = 88/112 (78.57%), Query Frame = 3 
Query:  156 MSNSLYLEHYLESIESLPYDLQRNFSLQRDLDQRAHDLLDDIDKLCEEYISKVRDLLPAERKEYFTKIENAFQKSREYGDDKVQLAVQTYEMVDKHIRRLDSDLSRFEEELK 491
            M+ ++YLEHYL+SIE+LP +LQRNF L R+LDQR  D   +ID L  EYIS V+ L P +R E   KI+NA+ K +EY DDKVQLA+QTYEMVDKHIRRLD+DL+RFE +LK
Sbjct:    1 MATAMYLEHYLDSIENLPCELQRNFQLMRELDQRTEDKKAEIDILAAEYISTVKTLSPDQRVERLQKIQNAYSKCKEYSDDKVQLAMQTYEMVDKHIRRLDADLARFEADLK 112
The following BLAST results are available for this feature:
BLAST of TCONS_00065665 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ING51.482e-4263.39Inhibitor of growth protein 5 OS=Homo sapiens GN=I... [more]
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