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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00065687 ID=TCONS_00065687|Name=TCONS_00065687|organism=Clytia hemisphaerica|type=transcript|length=933bp
GTCGAATCTACCATCACCCATGATTGAAagagaatctttgtttttaattt
ctgcTCTTGCTTCCTGTATAGTTTCCTTCAAGACTTGATTTATCGCAGGG
ATTACTAAAACACGTTGAACTCTGTAAAAAGTctctttgtttacaaaatt
tagACCTGAAAATTCAGATGCTTTTCTAAAAGTTTCAAAGATGGAACCCG
AGAAGAAGATTGATGCCGGAAGCAACATGTTGAAGGCAGGCATTTTTCCA
ATTAGTGGTTGACTCCTCCAATCAACGACCAAATGTTTTTCTTCACAATA
TATTTTAAAGCCAATACATGTACCGAATTTCGTTTTCTTGATATCACCAG
CCGGAAGTAAGCATTTCTTACATCGTACAAAGGAAACAAGTTGATCAAGC
ATACTCTCATACACAACAAATTTTGTATCGTTCAGTACGTCGATCTCTAC
TTCATGATTTGAATTTTCCAAAATGGAGGGTCTAAAATCACTGTCATTGA
TGTCATCATTATCAACTTcactttcaaatgaaaaatcagGTTGGGATAAA
ATTGAGGCTCTAGACTTCATTGGGCTGGATGACGTAGGCCAGAGAAAATC
ATCTGTTTGGGTTGCAATTTCGGTGGTTACGACCTCTTTCTCTGCAACTT
TCGGTTCATTACTTGTTTCAATTATCGGAATGTTACTTTCGATGGTTGAC
ACATGTATATCGATATCGATTCCTGTGTTTTCGTTCAAAATCTCGATAGA
ATCGTTTTCATTAACAATGGGTCCATTACTAACGTTTATTTCATCTGTGT
CATCGATCGGTAGAGATGCTCCGTCAGGTTTAGGAGGTTCGTTTTCGAAA
AGCAGCTTTTTGACAACCTAAAAAAAGTTCATTTGTTTAACAAGTGAGCT
CAGAGAGGATTCAAAGTTTATGATAGAGTTCTG Run BLAST on NCBI protein sequence of TCONS_00065687-protein >TCONS_00065687-protein ID=TCONS_00065687-protein|Name=TCONS_00065687-protein|organism=Clytia hemisphaerica|type=polypeptide|length=190bp
MKSRASILSQPDFSFESEVDNDDINDSDFRPSILENSNHEVEIDVLNDTK
FVVYESMLDQLVSFVRCKKCLLPAGDIKKTKFGTCIGFKIYCEEKHLVVD
WRSQPLIGKMPAFNMLLPASIFFSGSIFETFRKASEFSGLNFVNKETFYR
VQRVLVIPAINQVLKETIQEARAEIKNKDSLSIMGDGRFD Run BLAST on NCBI transcript from alignment at scaffold_442:29735..30667 Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00065687 ID=TCONS_00065687|Name=TCONS_00065687|organism=Clytia hemisphaerica|type=transcript|length=933bp|location=Sequence derived from alignment at scaffold_442:29735..30667 (Clytia hemisphaerica)
CAGAACTCTATCATAAACTTTGAATCCTCTCTGAGCTCACTTGTTAAACA
AATGAACTTTTTTTAGGTTGTCAAAAAGCTGCTTTTCGAAAACGAACCTC
CTAAACCTGACGGAGCATCTCTACCGATCGATGACACAGATGAAATAAAC
GTTAGTAATGGACCCATTGTTAATGAAAACGATTCTATCGAGATTTTGAA
CGAAAACACAGGAATCGATATCGATATACATGTGTCAACCATCGAAAGTA
ACATTCCGATAATTGAAACAAGTAATGAACCGAAAGTTGCAGAGAAAGAG
GTCGTAACCACCGAAATTGCAACCCAAACAGATGATTTTCTCTGGCCTAC
GTCATCCAGCCCAATGAAGTCTAGAGCCTCAATTTTATCCCAACctgatt
tttcatttgaaagtgAAGTTGATAATGATGACATCAATGACAGTGATTTT
AGACCCTCCATTTTGGAAAATTCAAATCATGAAGTAGAGATCGACGTACT
GAACGATACAAAATTTGTTGTGTATGAGAGTATGCTTGATCAACTTGTTT
CCTTTGTACGATGTAAGAAATGCTTACTTCCGGCTGGTGATATCAAGAAA
ACGAAATTCGGTACATGTATTGGCTTTAAAATATATTGTGAAGAAAAACA
TTTGGTCGTTGATTGGAGGAGTCAACCACTAATTGGAAAAATGCCTGCCT
TCAACATGTTGCTTCCGGCATCAATCTTCTTCTCGGGTTCCATCTTTGAA
ACTTTTAGAAAAGCATCTGAATTTTCAGGTctaaattttgtaaacaaaga
gACTTTTTACAGAGTTCAACGTGTTTTAGTAATCCCTGCGATAAATCAAG
TCTTGAAGGAAACTATACAGGAAGCAAGAgcagaaattaaaaacaaagat
tctctTTCAATCATGGGTGATGGTAGATTCGAC Coding sequence (CDS) from alignment at scaffold_442:29735..30667 >TCONS_00065687 ID=TCONS_00065687|Name=TCONS_00065687|organism=Clytia hemisphaerica|type=CDS|length=570bp|location=Sequence derived from alignment at scaffold_442:29735..30667 (Clytia hemisphaerica)
ATGAAGTCTAGAGCCTCAATTTTATCCCAACctgatttttcatttgaaag
tgAAGTTGATAATGATGACATCAATGACAGTGATTTTAGACCCTCCATTT
TGGAAAATTCAAATCATGAAGTAGAGATCGACGTACTGAACGATACAAAA
TTTGTTGTGTATGAGAGTATGCTTGATCAACTTGTTTCCTTTGTACGATG
TAAGAAATGCTTACTTCCGGCTGGTGATATCAAGAAAACGAAATTCGGTA
CATGTATTGGCTTTAAAATATATTGTGAAGAAAAACATTTGGTCGTTGAT
TGGAGGAGTCAACCACTAATTGGAAAAATGCCTGCCTTCAACATGTTGCT
TCCGGCATCAATCTTCTTCTCGGGTTCCATCTTTGAAACTTTTAGAAAAG
CATCTGAATTTTCAGGTctaaattttgtaaacaaagagACTTTTTACAGA
GTTCAACGTGTTTTAGTAATCCCTGCGATAAATCAAGTCTTGAAGGAAAC
TATACAGGAAGCAAGAgcagaaattaaaaacaaagattctctTTCAATCA
TGGGTGATGGTAGATTCGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00065687-exon-scaffold_442-1491911889:29735..30667 | TCONS_00065687-exon-scaffold_442-1491911889:29735..30667 | Clytia hemisphaerica | exon |
| TCONS_00065687-exon-scaffold_442-1510915933:29735..30667 | TCONS_00065687-exon-scaffold_442-1510915933:29735..30667 | Clytia hemisphaerica | exon |
| TCONS_00065687-exon-scaffold_442-1575043694:29735..30667 | TCONS_00065687-exon-scaffold_442-1575043694:29735..30667 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_442 | supercontig | scaffold_442:29735..30667 . |
Blast
The following BLAST results are available for this feature:
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