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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00065747 ID=TCONS_00065747|Name=TCONS_00065747|organism=Clytia hemisphaerica|type=transcript|length=1459bp
CAGGGAAGTAACAGTCTGCGCATGGGAAGATcgagttttatttttgttta
acttCATAGAAATTACAATTTTTCAACTACAATATTTAATACAACATTTC
GTCAGAAATCACCAGCCCTaaaaatcttataaaatatTAGTCTCTATCAG
ATTAAAGTCCAAACGTTGAAATCTCAATAGAGGGTTGTTTATTAaaaagg
gtatgacttttttctcCCAATTTTGTTATTAAAAAAAGCTACGACAAAAG
AACTAAATCGTGCCtacaaaaaagccaaaaaataagCAATATACATAGTT
CAATAAATCTTTTCCAAGCCTCTTTCATGACTCATATACCACTCAAAACA
GAAGAAAATTGGAGTAAATCTTTGAAAACATCTAAAAATAGGGCTCAAAA
AAGAAGGGAGTAATACATTATAGttccactttgaaaaaaaattatgaaca
atTAATTTTTTAGTATGGTCAATAATTGTTCTTATCATTTCAAGCAAAGA
AACCGATTCAAAAATTTCTGGAATATAAATATTAAGGTAAGGGTTTAAAG
TGTTATTTCAATCAATAAAATTTATCGAAATAGATCGAAAAATTATGTGC
CCATTGTTCTGTTTTTGAGAGgtatttgaaaaatgatttaaaaattttaa
aagtattGAACTAGTGTCTTTTTATAACGttataaaatatgaaattttta
ttttacactttttttcatCCTATATAATTAAAGATGGAAATAATAGGGTG
GTGTccatcaaatttgaaaataactttgatGAAAATATATTAATTCTCTC
AAAATCATCAAGCGGCAGGTTGGACAAGCAATTATAATCATTAAGTGAAA
TTTAGTGATTTACTACAACATAGCTGATATAGAAATCAGAACGGCGCTGC
GTGGagtattttttagctttttggtTCCACCACCCAATAAATAGTGGGTC
AGATTTTCCCTCTTTAATTATATATTGTcctaaaaaaattccaaaattaa
aagacctaattttttaacctttacaTACTACTAATTTACACAGTGATGCA
TATATTGAgacagaaaaaaaatgaagaaagagagaaaaaaacaacgcaaa
ttttagattttttatgggcgcaaaagaaagttaaaattgaaaaagaaaat
gagacCAATAAAAGTTTACTTATACTTGAGTATACTGATCGAACCTTGAA
AGGATTTCCTGTACTCGATGTAAAAAACTTAAGAAAATTTATTAAACTCG
GAAACTTCAATTGATATCAGCAAATCGTTTAGAAATTTTACCAACTTTGG
AGTTAACTTTCAGCACGGTGAGGAGTAACTTTCGTAACCTCCAAACAGTA
CtcttctggtctgtaatttgacTGGAACTGTTTATGGCTGGAGATtcata
ttcttttgttttcaagtcagaaaattgggTGGGGATAGGAAAAATAGCAT
AGTATTTTN Run BLAST on NCBI transcript from alignment at scaffold_443:318805..320263 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00065747 ID=TCONS_00065747|Name=TCONS_00065747|organism=Clytia hemisphaerica|type=transcript|length=1459bp|location=Sequence derived from alignment at scaffold_443:318805..320263 (Clytia hemisphaerica)
NAAAATACTATGCTATTTTTCCTATCCCCAcccaattttctgacttgaaa
acaaaagaatatgaATCTCCAGCCATAAACAGTTCCAgtcaaattacaga
ccagaagaGTACTGTTTGGAGGTTACGAAAGTTACTCCTCACCGTGCTGA
AAGTTAACTCCAAAGTTGGTAAAATTTCTAAACGATTTGCTGATATCAAT
TGAAGTTTCCGAGTTTAATAAATTTTCTTAAGTTTTTTACATCGAGTACA
GGAAATCCTTTCAAGGTTCGATCAGTATACTCAAGTATAAGTAAACTTTT
ATTGgtctcattttctttttcaattttaactttcttttgcgcccataaaa
aatctaaaatttgcgttgtttttttctctctttcttcattttttttctgt
cTCAATATATGCATCACTGTGTAAATTAGTAGTAtgtaaaggttaaaaaa
ttaggtcttttaattttggaatttttttaggACAATATATAATTAAAGAG
GGAAAATCTGACCCACTATTTATTGGGTGGTGGAaccaaaaagctaaaaa
atactCCACGCAGCGCCGTTCTGATTTCTATATCAGCTATGTTGTAGTAA
ATCACTAAATTTCACTTAATGATTATAATTGCTTGTCCAACCTGCCGCTT
GATGATTTTGAGAGAATTAATATATTTTCatcaaagttattttcaaattt
gatggACACCACCCTATTATTTCCATCTTTAATTATATAGGatgaaaaaa
agtgtaaaataaaaatttcatattttataaCGTTATAAAAAGACACTAGT
TCaatacttttaaaatttttaaatcatttttcaaatacCTCTCAAAAACA
GAACAATGGGCACATAATTTTTCGATCTATTTCGATAAATTTTATTGATT
GAAATAACACTTTAAACCCTTACCTTAATATTTATATTCCAGAAATTTTT
GAATCGGTTTCTTTGCTTGAAATGATAAGAACAATTATTGACCATACTAA
AAAATTAattgttcataattttttttcaaagtggaaCTATAATGTATTAC
TCCCTTCTTTTTTGAGCCCTATTTTTAGATGTTTTCAAAGATTTACTCCA
ATTTTCTTCTGTTTTGAGTGGTATATGAGTCATGAAAGAGGCTTGGAAAA
GATTTATTGAACTATGTATATTGcttattttttggcttttttgtaGGCAC
GATTTAGTTCTTTTGTCGTAGCTTTTTTTAATAACAAAATTGGgagaaaa
aagtcatacccttttTAATAAACAACCCTCTATTGAGATTTCAACGTTTG
GACTTTAATCTGATAGAGACTAatattttataagatttttAGGGCTGGTG
ATTTCTGACGAAATGTTGTATTAAATATTGTAGTTGAAAAATTGTAATTT
CTATGaagttaaacaaaaataaaactcgATCTTCCCATGCGCAGACTGTT
ACTTCCCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00065747-exon-scaffold_443-1491911889:318805..320263 | TCONS_00065747-exon-scaffold_443-1491911889:318805..320263 | Clytia hemisphaerica | exon |
| TCONS_00065747-exon-scaffold_443-1510915933:318805..320263 | TCONS_00065747-exon-scaffold_443-1510915933:318805..320263 | Clytia hemisphaerica | exon |
| TCONS_00065747-exon-scaffold_443-1575043694:318805..320263 | TCONS_00065747-exon-scaffold_443-1575043694:318805..320263 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_443 | supercontig | scaffold_443:318805..320263 . |
Blast
The following BLAST results are available for this feature:
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