TCONS_00065817 (transcript) - C. hemisphaerica

Overview
NameTCONS_00065817
Unique NameTCONS_00065817
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2483

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00065817 ID=TCONS_00065817|Name=TCONS_00065817|organism=Clytia hemisphaerica|type=transcript|length=2483bp
TTCCATAATGACGTATGAAGCATGAATGCGCATGCGTCGATGTTGCGAGA
TAAAAACAACATACGGAACAAACAAAATTAGAGACAAGAAAAAGTTACCt
gtggaaattttgtgaagcAAATcaagaatcttcattttatttaTCATCCA
TTAGCTTCATAAATTCCACAAGAAAATGCATTACGCTTACCTTTTCAAAT
ACATTATCATTGGTGACACTGGTGTTGGGAAATCATGTTTACTCCTTCAA
TTTACTGACAAACGTTTCCAACCAGTTCACGATTTAACGATCGGTGTTGA
ATTTGGTGCCCGAATGATCACAATAGACGGAAAACAAATCAAACTTCAAA
TTTGGGACACAGCAGGACAAGAATCATTCAGGAGTATCACCAGATCATAT
TACAGAGGAGCAGCCGGTGCACTACTAGTATACGACATCACCAGGAGGGA
CACATTCAACCACTTGACGACTTGGTTAGAAGACGCTCGACAACATTCCA
GTTCCAATATGGTCATCATGCTTATCGGAAACAAAAGTGATTTAGAAGCC
CGAAGAGAAGTTAAAAAAGAAGAGGGTGAAGCATTCGCTCGTGAACACGG
TCTGATCTTCATGGAAACAAGCGCAAAGACAGCGGCCAATGTTGAAGAAG
CATTCATCGGAACTGCAAAAGAAATCTATCAAAAAATACAAGAAGGAATA
CTTGACTTAAATAACGAAtcGAATGGAATCAAGATCGGACCACAACATTC
AGCGGCTAGTCCTTCACCGATGGGTGGCGGAGCCGGCGGCCAACAAGGTG
GTGGTTGTTGTTGATCTTCCTTCTCTCTCACTTCATTCTTTTCGTGCAGA
ATTAATATACTTTATATTTCTATCTTATATCAGTCGTGCTGGGGATTACT
ACCTGTTTAACAAGGTTTGTTGCCTACTTCACAAGGATTAACTTTGTTTA
ATACCAGCGATGGTTTGCTGGAGTGTGATCCAAAGAGAATATCGTAATAA
CATtatgaaaattaagttttaatgTTAACCACCTAGTTTTTATTACATAT
GCAAGACATTTTGagcgaaaaatgaaattaattacTTGCAAAATCTTTCA
AGTTAAACTTGGGTATTTTGAACCCCTGTGATATCAAAAAAAGTATCCCA
AGGAATCCTTAGTGACTGCAACTGCAGAATTTGCATCTCTCAAGTTTTGT
TTTCGTAATTATCTTAAGGGAACTTactttggcgggaactaattttggcg
aattttgtctaaattcattcgccaaatccgccaaaattagttcctgccaa
aataagttcccttaaggtatatctTATTTATTCCAAAAGTAAAACCGAAG
AAGAAAACAAACGAATTTTTGCATTATAAACGAGCATTTTAAACGTTAGG
TCAGACATATTCTATGAGGCCAGTTCATAAAATGTTAGTAGTAAATCCTG
TTATATATTTTACTATGTATACATcactaaaaatttattttctctttCCA
ATTATATATCAACTCAgtaatttattattttgttttctgtgAGAGGTTTT
TGAATGCACTTGTTGACGTTTTTTTCAGTGAAGTGGCTATAATACAAGCA
GTGCAAATAACgtaaattttcttccattttgggactttttttcaaacttc
gtCCAGCTataaaaaaacttttataagaTTTGCATAACGTGCCCTTTGCT
TTGAATAATATTTTGATATCGTCACTTTTCTGGGACGTTTCacttgttct
tattattttcTCACATAGCAAGCACGGGGTGATAGTAAAGTAttactttt
tagatttttttctactATAGGGTTTCtgaatgaaaaagtttattCGTTCC
ATAGTTACTAGTTACAATGGGCCCTCTCTTATACAAAAAAATCGATCCTT
TTATGGAAAATCCTTCGAATAAAACTTTTCATTCGAAGTAGTTACAGTGG
GATGGCTCTCTTTGATTCGAATTTCTATCATTCATTATACAACTCCAAGA
CTTATATAATACTTGATGTAATTCGAATCAGAATCGAGAGCTATATAGTA
AGTAGTAATCCAGTCTGGAAAGAAGAGAATATTTACGCCAGAGATTTCAA
GGCGTAGCCTTTGTGTAAGCCTATGAAATCCAAAATCTGCGCCGGAGATA
TCCGGCGTACATGCCTTACTTTCCAGATTCGACTATATTGTGaacaaaat
gtattttttatttatggGTCAATCAATACCTTTTTcgtttagaaattttg
aaataaaaaaaaatctataaaacgtagaacatttttttagatatgaattt
caacctttttttttgtttatttgtttttttttgtttgtgtaTCGATGTAC
TATGTCTTATTTGAATTGAAATATACAATCTAAaccaaaatttatctttt
ttttatcttatatTGTAGAACCACAAGGCCTCCGTCctatattttctatt
ttggaatttttttaaaaacggGCATAACAAAAG
Run BLAST on NCBI

transcript from alignment at scaffold_445:59394..73950-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00065817 ID=TCONS_00065817|Name=TCONS_00065817|organism=Clytia hemisphaerica|type=transcript|length=14557bp|location=Sequence derived from alignment at scaffold_445:59394..73950- (Clytia hemisphaerica)
TTCCATAATGACGTATGAAGCATGAATGCGCATGCGTCGATGTTGCGAGA
TAAAAACAACATACGGAACAAACAAAATTAGAGACAAGAAAAAGTTACCT
GTGGAAATTTTGTGAAGCAAATCAAGAATCTTCATTTTATTTATCATCCA
TTAGCTTCATAAATTCCACAAGAAAATGCATTACGCTTACCTTTTCAAAT
ACATTATCATTGGTGACACTGGTAAGCTCAAAAGTATTTGTATTTGGTTG
TAATTTTGGCTTATTTTTCTGACCAATAAAGATTCTTTTAGTTTTAATCT
GATCTCTGATCTTTACTGTTTGTTAGACATATAAGTGCCTAGTTCTTCCG
TCTGATAAAATCAACAACTTTTTCCAATCAATGGATTGTGATAACAATAG
ATAAAATTTGATCATTTTTCCACAGTCTAGCTTAATAGTGGTGAAGGCTT
CTTCGTAAAAGCGAAAGACATGTACCTATTTTTCGGATCCGGCATGCGGG
AATATTGTCAGGACCTGCAGGCGACCTGGTAGGGTTGGGTATGGGTGTGG
TTTGGGTGTGGTTACGTATCAGATTGGCTAGGAATTTGGTTATTATAAAT
TATAAGCTAGGGTTAGAGTTGGAGCTCAAAACAAGCACTCTTTTGTGATT
TTATAGTATAGTCTGTAGTTTGTACAATATGAATAGCCATTAATGATTTT
TTTGGTATGTATGACGTTAGGTTTCTGATCAGCGGGACCTTGCTTTTAGT
GGGTTCAAACCCCNATCTCTTAATACAGTCTGGTCTGTAGTTTGTACAAT
ATAAATAGCCGTCAGAAACGCTCTTTCCGTGGCGCAGTGGATAAGGCATT
GGGTTTCAAAACATTGGAACTTTGCATTTGGGTTCGAATCCCCCGGTGGC
GATCTGTCGGTAAGTCATTCAGTAAGTTAGAAAACATAGTAAATAACTCA
CACAAAACCAGAACGTCAGAAAAACTACGAACAAGAGACTGGAAAATACG
AAATAAGTTCAGATCTGTCTTTCGTCTTTACGAAGAAGCCACGACCCTTA
ACAGTGGTCACTCACATATTGACTCTTCCCACAACTAACGTCAAACTGGT
GCTAATTTGAAAACCCTCCCACCCCCACTTCTTAACTTCAAAGTTTAAAA
ATTGACGAAACTCTAAATTTTCTCTTTCACTCTCCAGCGTTGTTTTGTCA
GCCATCTTTACTTTTGCTAAACGTTGAGTCGTTTGTTTTGGTTAAAATTG
TTCTATAAAATAGTGAAGTGAACAAACACTAAGGAGGATTAAAGAAATAT
GGAAAGTAACATTGGTCACGGAATAAACATCTCAAAAATCTGTTTCTGGT
AAAATTTCTTAGCGTCACAGACTCTAACACCCCCACCCCGTTGCATCAAT
ATGACGTTAGTCGTGGGAAGAATCGATATGTGAGTGACCCCTTATGATAT
TTTTGCTGCTTGTTTAAACCCTTGCGCTTGGGCTTGGCGTAGGTAACGCG
TCTGCAGGGAGATTTTTTCCTGCAATGCAGGTTCAATCTGATTGGCCAGA
TTTTTAGCGTATTACTTGGCAGTACTTTAGCGCGCATTTTGATAATTTCA
AAATGCGTGCTCATAATTTATGGGAAAAAAAGAAAACAAATGAAAATGAA
AACATAGATTCATTTAGAAACGAAATGACTGTTGGCTGGAAGTCTAAATA
CATCAGTCTAGCAGAATGTTAATTCTTCTTTCAGAAAAAATACTATAATT
TGTTTACCTTTATTCCTGCAGCTTCCCAACATCCAAGCTCTCAAACATCA
CAAGCCAAATGAAATTACTTTCAATTTCCCGTAGAAATTATGCGATNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNGGTCTTAACATTTTTCCCTCGCA
AGTTTTGGGGGAAAACGAAAGTACTCTATATTTTACGTATGGGGAAGTGT
AAGAAAGATTTACAAAATAGAAAAGTTTCGTTTTGGGGTANNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNTAACGATAAGTTCCGTAGTTATG
AGGTTATCGCATATCAAGACAAAATGTGATGAATTTGCGCGGAAACGAAA
TTTAACATTGTTCTAGGCTGTACATATGTGGTTGATGTTTTGATGTGGTT
TTTAGTAGTTTTGAAAGTCTTTACACGCGTGTCTGATTTAAAAAAGCGTG
TGTCAATGTTTGATCGAAGAAATTTGTTTTCACCAATGGTTAAGCTTTTG
ACTATATCTAAAGAATTAATAAACTTTGTTAAGATCTGTAAAAAGCTCTC
TACTCCCAAATAGTTCTAGAATGAACCCTGAAAAAAACCAAGATAATTTG
TGGTGAAAACTTATTTCTTCAATCAAACATTGACACATGCTTTTTGAAAT
CAGATCTTAAAGATTGAAGATGAAAATTCACGAAGAAAAAACAAACCTTA
AGCAAAGAAATTGCCTTTATAGCTCATTTTTCCATGAAAAATAGAAAAAC
TTTCAGATATTTAAGTTCCCCAAACATTGTAGAATCTCTTAGTACACATG
GCAAAAGAAAAAAGAAACAATTAGAACCTTTAAATCAACTGAATTCTTTC
CATAATCATGAAATAAAAAAGTATAAAATAAAATGGCGGAAGGACGTTTT
TTCAATGTATAGACATCAAAAAACGTCCTTCCGCCATTTTATTTTTTGAA
AATGTGAAGTCAGAACTTCTTGTCACGTCTGGTCACGTGACAAATAAATT
TCCGACATCCAATGAAAATGCGCGGTTTGTATCATGTGCTAGAAAAAGTC
ACGTGACAGCAATTTCCATAGAATGGCCGTTCCGTTATATTTATAGCATA
AGAGAATACAAAGATTCAACCAGGGGGTTATAATTTATATTATTAGCTGG
AGCTTCTTGAGGCTAAGCTTTTAGGGTAATGTCAAGATTATTTGAGATTA
ATTGCTTTACCAAACAAAAAGATATTGAAAAGTCTTGACAGACCATTTTG
TCATTTTTGTGTCATTTTGGTCAGCTGAACAGATTGATGCATTTCCATTG
TTTTGCCTTTTGGAACACACGTGTTTAGAGCTTTTGAAAGAGTTTTTATG
GTAAGTGGATTATGTTTGTTTGCCTGGGTTTCCAAAGTTCAGAAAGTCTG
TCAAGAAACTGTTTATAACATTCTGTGTCAGACTAAACTACCTGCACCAA
GCTTTATAATTTTAGAACTTTGTGAGGTGAGGTATTTTTTGTTTTTCTAA
AATTATGAGCTTGGATTCCCAGGCTACGAGGAGCAGTACTAGTGCCTAGT
TCCTGATTGATGTACCAGTGTGTGACTGATTGCTTAAAAGAGAAAATCAG
TGCTCTACTTCAGTGCAACTGGAACTTCGATATTTGAGAATTACAATTTT
ACCAGCTTTTTAGCGATTTTTGCCTCACTAACCCAAATTTTGTAACCTCT
TTACCTAAAGCACATCAAAATTAGAGTCTTTCAATGTTCTGAAAAAAAAA
TGCATTGCAGAAAACAGGATCGATTCTCAACTACAAAATACATCTTTTGG
TCAATGGGTTTTTTCTGATGTTCTTCTTTCAAAGAATATGGATCACTTTC
GTTTTTCCCTTGAGCGTGCGAGAAAATAGGATTAGCTGGGTGAATAAAGA
TGAGGTGGCAATCTTTTGCAGAGGGTGCTACTTAGTTTCTGCTTATTTTG
CGCTCACAATAGAATAATCCAAATACGGGGTGTTTCTTTTCTGAGAGATG
CGTATTATATTGAATATTATTAACTTATTCATTCAAGTATTTTTTAGCGT
AACTTTTAATATATGTAATAGTTATCACACAGTGCAGAGTACAATATGGG
ATACATTTTTCCAGTTCAGAATTTTTGTAATATTTAATATAGAAAACTCT
GAACAAGAAATATAATATCCAATATTGTATGAGTGAAAGTGTGATAACTA
GTTTATTGTCAACTTGAAAAATATCAACAAACAATCTCTCTCCATTTGTC
TCTATGTTTTGTTTTGTTTTCACTTACTTTATTTTGATGAAATCAAGATA
AAAACATTCAAAAATTATTTGAATGCTCATGAAAAGATCAAAACACTCTT
ATTTGANCGATATTTGAGAATTACAATTTTACCAGCTTTTTAGCGATTTT
TGCCTCACTAACCCAAATTTTGTAACCTCTTTACCTAAAGCACATCAAAA
TTAGAGTCTTTCAATGTTCTGAAAAAAAAATGCATTGCAGAAAACAGGAT
CGATTCTCAACTACAAAATACATCTTTTGGTCAATGGGTTTTTTCTGATG
TTCTTCTTTCAAAGAATATGGATCACTTTCGTTTTTCCCTTGAGCGTGCG
AGAAAATAGGATTAGCTGGGTGAATAAAGATGAGGTGGCAATCTTTTGCA
GAGGGTGCTACTTAGTTTCTGCTTATTTTGCGCTCACAATAGAATAATCC
AAATACGGGGTGTTTCTTTTCTGAGAGATGCGTATTATATTGAATATTAT
TAACTTATTCATTCAAGTATTTTTTAGCGTAACTTTTAATATATGTAATA
GTTATCACACAGTGCAGAGTACAATATGGGATACATTTTTCCAGTTCAGA
ATTTTTGTAATATTTAATATAGAAAACTCTGAACAAGAAATATAATATCC
AATATTGTATGAGTGAAAGTGTGATAACTAGTTTATTGTCAACTTGAAAA
ATATCAACAAACAATCTCTCTCCGTTTGTCTCTATGTTTTGTTTTGTTTT
CACTTACTTTATTTTGATGAAATCAAGATAAAAACCTTCAAAAATTATTT
GAATGCTCATGAAAAGATCAAAACACTCTTATTTGACATTTTTTTTGTGA
TTTGAGAGGTAAACAAAAACATTTCTGGGAATAAATTTGGGTAAAAAATA
CAACAAGAAAGTTTAAAATACAATCTCTCACTTACCAGACCCCTCTTTTG
AACGCGGTTTTGCATTTGTACGGTACAATATGAAATACAGCATTTATGTA
CAAAGGCTAAATAAAAAGCAAATGATGGCAATTCTGTTTTTTTCTCTAAC
ACCTGGGAAAAGTTTTTTTGCTGACTTAGCTATTTTACAAATCTCGGAGA
AGAACTCCTATAAGAATGCTGATACATAACCCGATTGGTTAATTTTGGAA
CAGCTTTAAGAAAGTCAAAATGGCAGATAATTTGGTGAGGAAATGTGTGG
AATTTGTTGATGTTGATGGCTTGTTGAATCTGTAAAGAGAAGGACAAGTT
TTTTAATTGTTTCGTTTTTAGGGGTCTTTGGAAATCATCATTCATTTCTA
ATATAATGAATGAACTAAAATTATGCCCTGGTGATGGTTGCGTGGAAAAG
ATGAACTTTAAAAATTTTTTTAAGAATTTTTTCTAAAGCTTAAATCTTTC
ATGACTTATGCTTCAACAAAGTGCGGTCCAAAAATGAGCCAATACTTAGC
ATTTTAGTAGGAGCAAATACTTAGCATTTGGATATAGAGGCTTGTATCTC
TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNAAAAATTTAGCATTGACTGGACACA
GAGTTCTTGAAGGCCATGTCTTTATGCTAAAATTTGAAAACCCGAAGGTT
ATTGTTATTTCATAGCTCATTTAGGCGCAATTTGATGCTTGGATCATTCA
CGAAGCTTAAAAAGTCTTTTCTGTGATCTTTGTCATAGTTAAATGGATCA
AAAACGAGCAGTATTTTAGCATTTTAACGGAAAATGTTAAATATTCTGGA
CCCTGAAAAGGTTTTGAACATCAAATAAGTTATCATTAATGTTTGATACA
CAATTGGACAGAACTTCATGAGGTTATTTTATGTTCCTAGGTCTCAAAAT
GAGCTGAATTTAGCAAAAATTAGACTAGGTGTAAAGTTAATTTTAGTAAG
AGAAGCAGAATAAATTGTAGTATTTCCAGTGGAAAATGCTAAATTTAGCT
CCAAGCGGGCCCTTTAACAGCTCAAATGTTTTATTGGTGTTAATAACTTG
ATTATTAAACTACTTCAAAGGAAGTTATGAAGGTTTTACACCCACTCCAG
CCTTTTAATTAGGTGTTTAGAAACATACTAGTAATTCTGCTGCAGTATTT
TTAGTGAAAAAATGCTAAATTTAGCTCCAAACGGGCCCTTTAACAGCTCA
AGTGCTATATTGGTGTTAACAACTTGATTATTCAACTATTTCAAAAGAAG
TTATGGAAGTCTTATACCTAATCAAGCCTTTTACTTTGGTGTTTTGGNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNCCTTTGGTGTTTTGGCACTTATTGTC
AATGGGGAAATAGGTGCTAAAAAAGTGCTCTAAAAAGGGCCCCATAATAG
GAAAATGTGGGCCTTTTAACAATAGGCTACTCTAATTGCCATCCCTCTAT
GAGAATCATTGGTCAGGTAGACAACTTCCTGGGTTTTTAGCTCTGATTTA
GATCATTTTCCGAAACACATACAAATGCTAAAATTTGCTCCTAACTGGCC
CCTACAACAGCTAGAATTTTGGGAAAAGAACTTTTTGGGGTCCTATCATC
ACTACTAACATCCTGTGAAAATTTCGGACCTTCAAGTTACCCCAATCAAA
ATTTAGCTTTTTTGAAAATGCCAAAAACGAAACAATTAAAAAACATGTCC
AGAAAAGAAAGCAGAGCTTTTTTTAACCAAGGAATATCAAAGTTCATATG
AACTGATCAGGATGATAAAAAAACTCATAAGGCGAGGCCACAATCACAAA
TAACTTGTGTCTACAGGAGAAGTGATGTTACGTGAAAGAATTCCTTGAAA
AAGCATGATTATGACAGTATAGTTGTCTTGGTTTGGCTTGGATTGAAGTT
TTTGTCTATGCTAAAGATCAAAATATTTTTTTCCTTGCAACCTTTCCAAA
CGCAATAATGGTAATAGTCCCTTGTGCATCTTGTCACACAGTGATATCCT
ACTATTTAAATCGATTTGAGTTACTGTAAAACCTTGAAAATGGCCAATAA
ATGATCCAAAAAACATTGGAAACCTTGAAAATGTATGGTGAAAAAATTTG
GTAGATACCCTAAGGGGTTGGACAACTGGAATTTTCAGACAAAAAAAATC
AGAAATCCAGTCAAATTTCAAGAATTGCTACAGAAATTCTGCTCCATTTT
TTAGTTGAATTGTTAAAGATGATTCCATAAGACAGCCTGGGCGTGGAGAA
TCCTCTTAATCGGATTGCTTATATTTTTCATGTTAATGATAAAAGATATT
AATAATTAAATACTACTGGCAGGCAAAATTCTTAGTACTTCTGCCACTGG
CCGTTTTTCAGATTAGAAATTGAGTTTCCAGCAATTTGGTAACCACTTAG
AGCAAGTAATCAATACCAATGAGAGGCCTTGAAATCTTGAGTCCAATTTT
GGAGAAGAAATATGCCAGAAATCGCAGTTTTTTAAAGATTTTCATTGGAC
TTTTTCCTTTTCGTTTCGAGACTGTTATGCAATATTTCATCTCATTGGGA
ATTTCGCCGGCAGTTTCTGCAGTTTCAGCAGTTTTGACACCAGTTATTTA
AAATGATGAATTTATTTCTATTATTCATTCAGGTGTTGGGAAATCATGTT
TACTCCTTCAATTTACTGACAAACGTTTCCAACCAGTTCACGATTTAACG
ATCGGTAGGTATTTATTATTAAGATTACTGACAAAATATATTTTTGAAAT
AACATAATAAAATTTCCACAAAGTTTCTTCACACTCGGAATAAACTAGTT
TTGGAGATTGGATTTTAAGGTCTACCTACACTACACAATATATTTCAGAT
AATATATTGATAGTATATTGCTGAATGCCGGCAAAATATTGAAAAGGTGT
CCACAATATATTGTCAGCTCAATTTGAAATATTCCGACAATATAGGAGGA
TTGTTTACAGAAATAAAATTCCTTTTTTTAATAGATCACCTATTGTTTAC
TCCTTACATTACGGTTCGAAAAACATATTTTCGAATAGTGCTCACCAACA
TATTGTGTAGTCTTTTAAGTAGCCCTTTAGGATTTTTTTTCAAACTTAAA
TATTGATCACCGGTCATTTTCAATTCTATTAGTCTTTTTAATTCTATTAG
TCTTTTCAGTAAGTTTATGCCTCAATGACACCTTTTGAAATCAAAGTTAC
CACACTCCACAGTCTCAATTATGGTGGGTACTTTTAATGTCACTTTTTTT
GTAAAATCTATACAAGTTGTATAAAATTCTTTACAGGTGTTGAATTTGGT
GCCCGAATGATCACAATAGACGGAAAACAAATCAAACTTCAAATTTGGGA
CACAGTAAGTGAAGTTTTTAATTTACAAACCAAAACTTCTGTTTAGCTTC
TATTATCAGGATCTTGGATTACAAATGCAGCTGTTTTTATCCACTCTACA
ATTCAAATACATTTGGGAACAGTGGCGGGTTTCACTCCAGCGACCAGGTC
TAATTTGAGGTTTACGATGTCAATGCGGGTTCGTTAAATTTCACTTTGAA
AATTATCTTAAATGTATAACATTGCTTTTATCCACACCTCTTCGTGCAAA
CATAGACTTATAAAGCCCAAAGGGCTAGATGTCGTACTTTTGCTGAAAAA
TATGCTGTGGTTGGATTGGAAATCCTACCTAGGTCACGTGACACAATAGA
ATTTCACGCTTGCCCAATCAGAAGCTTCGTGGGTTTTCGAAAACAATAGC
AACAATATTTTTTCCGATATTCAATTTTTTTGCCTGCGATGGCTTAAAGC
ACGCCATCTAGCCCTTCGGGCTTTATAAATATATGGGTGCAACTCTTGCC
AACCATTTCATTGTTTCTTCCAGGCAGGACAAGAATCATTCAGGAGTATC
ACCAGATCATATTACAGAGGAGCAGCCGGTGCACTACTAGTATACGACAT
CACCAGGTTTGTTCACCACACAATAATTCTGGGTGTCCCAATAAAAATTT
ACATGTCTCCAAATGCTAATATTTTGACGTAATTTTGTTAAAACACATCT
TTTTATATGTCAGTTTTTTGTGGTTTTTTTAAATAACGCCTTTTGCATAT
TTGCGTATAGAACAAATTATATTTCAAACTGATGTCTAAGATTTTAACAC
AATATGTAAAATGCCCTGAATTTCCTTTGTGTAAAATTTTGTGTTGATTA
GAAGTCAAAACGTCAGTTTATACCCGTTTGAAATCATGTAAAGTTTTTTT
GGTAGAAGGGTTGTTAGCTTTTTTTCTTAAGAAGTATCTTAAAGTATCGC
TGTTATGTCTTAAGTGGTTACTAAGCACTCATATAGCCAATGACATATGT
ATAGGAATCCTAAAACACTGTCAACAAGAAGTTTTCATATTTTCACAAAT
TGTTACAAATATGTTCTTTAATAAATAGATAGTTAAGTAATGAACTATTT
TCTCTTCACAGGAGGGACACATTCAACCACTTGACGACTTGGTTAGAAGA
CGCTCGACAACATTCCAGTTCCAATATGGTCATCATGCTTATCGGAAACA
AAAGGTCTGTCAGCAATAACTGTTATTGGTTTTCTTTACAATGTTTTGGT
CTTATAAAATATGACTAGACAAATACAGAGATTGTCAATATCATCTATAT
AGTGGTGATGAAAAAATGTCTCACAGATTCACGTCAATGGCCTATAATAA
GTCAGAAGAAATTCTATAGAAGTTCGTTAGAATTCGTCATACGATCCTGA
AAACCAAACCCCTCTACATGGCGTTGTTGTTTATTGTTCTTAAACTTCTT
GTAAATGTGTAAATTGTTTCTTAAATTCTTTCTTTCTATTTTAGTGATTT
AGAAGCCCGAAGAGAAGTTAAAAAAGAAGAGGTATGTCTCGTTGGTCATA
TTTTCACCTCATAAATCTTACTTAACTATTTGGGTGAGCTTTTTAAACCC
GTGTGTTTTTTAGCACTCCAGTTTTCCTTGTTTAGGCTTCCTTTAATTTC
ATCTCAACTGACTGGCAAAGGCACTGACAGTACTCTTTTTCTCAGCATTT
TCGTTTTTGATTTTTTGCAAGTTAACAAGAAGTTGAGTCTATAGACTTCT
ACAGTTGATCTGTTTTAAATTTTACTTTACTGCTGATCAAATTTTATTGT
GGATGTTTTATTACTTAATTAGGGTGAAGCATTCGCTCGTGAACACGGTC
TGATCTTCATGGAAACAAGCGCAAAGACAGCGGCCAATGTTGAAGAAGCA
TTCATCGGAACTGCAAAAGAAATCTATCAAAAAATACAAGAAGGAATACT
TGACTTAAATAACGAAGTGAGTAGGGTAACATACAGTTAATCAGATTTGT
GTATTAGTGGACATGAAAACACCTGTAATGTTTTACCTGTAGTATTTTTT
TGTGGCGTATTCTTTAATTCCTGAACGAATGATGTTGAATCTAGATTCTC
GTTCTTGTACTTGCCTCCTACTGTATTCAAGTCAGGTGTCAATTTTATAT
CAGTATTTAAAGTGAAAAGTCGTCATTATTGAAAATATTCAAGACTTATT
GAAATTTCTTTATTTTTTTTAGTCGAATGGAATCAAGATCGGACCACAAC
ATTCAGCGGCTAGTCCTTCACCGATGGGTGGCGGAGCCGGCGGCCAACAA
GGTGGTGGTTGTTGTTGATCTTCCTTCTCTCTCACTTCATTCTTTTCGTG
CAGAATTAATATACTTTATATTTCTATCTTATATCAGTCGTGCTGGGGAT
TACTACCTGTTTAACAAGGTTTGTTGCCTACTTCACAAGGATTAACTTTG
TTTAATACCAGCGATGGTTTGCTGGAGTGTGATCCAAAGAGAATATCGTA
ATAACATTATGAAAATTAAGTTTTAATGTTAACCACCTAGTTTTTATTAC
ATATGCAAGACATTTTGAGCGAAAAATGAAATTAATTACTTGCAAAATCT
TTCAAGTTAAACTTGGGTATTTTGAACCCCTGTGATATCAAAAAAAGTAT
CCCAAGGAATCCTTAGTGACTGCAACTGCAGAATTTGCATCTCTCAAGTT
TTGTTTTCGTAATTATCTTAAGGGAACTTACTTTGGCGGGAACTAATTTT
GGCGAATTTTGTCTAAATTCATTCGCCAAATCCGCCAAAATTAGTTCCTG
CCAAAATAAGTTCCCTTAAGGTATATCTTATTTATTCCAAAAGTAAAACC
GAAGAAGAAAACAAACGAATTTTTGCATTATAAACGAGCATTTTAAACGT
TAGGTCAGACATATTCTATGAGGCCAGTTCATAAAATGTTAGTAGTAAAT
CCTGTTATATATTTTACTATGTATACATCACTAAAAATTTATTTTCTCTT
TCCAATTATATATCAACTCAGTAATTTATTATTTTGTTTTCTGTGAGAGG
TTTTTGAATGCACTTGTTGACGTTTTTTTCAGTGAAGTGGCTATAATACA
AGCAGTGCAAATAACGTAAATTTTCTTCCATTTTGGGACTTTTTTTCAAA
CTTCGTCCAGCTATAGAAGACATAAAAAAAACTTTCTTAAGATTTGCATA
ACGTGCCCTTTGCTTTGAATAATATTTTGATATCGTCACTTTTCTAGGAC
GTTTCACTTGTTCTAATTATTTTCTCACATAGCAAGCACGGGGTGATAGT
AAAGTATTACTTTTTAGATTTTTTTCTACTATAGGGTTTCTGAATGAAAA
AGTTTATTCGTTCCANCTGTTTAACAAGGTTTGTTGCCTACTTCACAAGG
ATTAACTTTGTTTAATACCAGCGATGGTTTGCTGGAGTGTGATCCAAAGA
GAATATCGTAATAACATTATGAAAATTAAGTTTTAATGTTAACCACCTAG
TTTTTATTACATATGCAAGACATTTTGAGCGAAAAATGAAATTAATTACT
TGCAAAATCTTTCAAGTTAAACTTGGGTATTTTGAACCCCTGTGATATCA
AAAAAAGTATCCCAAGGAATCCTTAGTGACTGCAACTGCAGAATTTGCAT
CTCTCAAGTTTTGTTTTCGTAATTATCTTAAGGGAACTTACTTTGGCGGG
AACTAATTTTGGCGAATTTTGTCTAAATTCATTCGCCAAATCCGCCAAAA
TTAGTTCCTGCCAAAATAAGTTCCCTTAAGGTATATCTTATTTATTCCAA
AAGTAAAACCGAAGAAGAAAACAAACGAATTTTTGCATTATAAACGAGCA
TTTTAAACGTTAGGTCAGACATATTCTATGAGGCCAGTTCATAAAATGTT
AGTAGTAAATCCTGTTATATATTTTACTATGTATACATCACTAAAAATTT
ATTTTCTCTTTCCAATTATATATCAACTCAGTAATTTATTATTTTGTTTT
CTGTGAGAGGTTTTTGAATGCACTTGTTGACGATATTTTTCAGTGAAGTG
GTTATAATACAAGCAGTGCAAATAACGTAATTTTTTTTCCATTTTGGGAC
TTTTTTTCAAACTTCGTCCAGCTATAGAAGACATAAAAAAACTTTTATAA
GATTTGCATAACGTGCCCTTTGCTTTGAATAATATTTTGATATCGTCACT
TTTCTGGGACGTTTCACTTGTTCTTATTATTTTCTCACATAGCAAGCACG
GGGTGATAGTAAAGTATTACTTTTTAGATTTTTTTCTACTATAGGGTTTC
TGAATGAAAAAGTTTATTCGTTCCATAGTTACTAGTTACAATGGGCCCTC
TCTTATACAAAAAAATCGATCCTTTTATGGAAAATCCTTCGAATAAAACT
TTTCATTCGAAGTAGTTACAGTGGGATGGCTCTCTTTGATTCGAATTTCT
ATCATTCATTATACAACTCCAAGACTTATATAATACTTGATGTAATTCGA
ATCAGAATCGAGAGCTATATAGTAAGTAGTAATCCAGTCTGGAAAGAAGA
GAATATTTACGCCAGAGATTTCAAGGCGTAGCCTTTGTGTAAGCCTATGA
AATCCAAAATCTGCGCCGGAGATATCCGGCGTACATGCCTTACTTTCCAG
ATTCGACTATATTGTGAACAAAATGTATTTTTTATTTATGGGTCAATCAA
TACCTTTTTCGTTTAGAAATTTTGAAATAAAAAAAAATCTATAAAACGTA
GAACATTTTTTTAGATATGAATTTCAACCTTTTTTTTTGTTTATTTGTTT
TTTTTTGTTTGTGTATCGATGTACTATGTCTTATTTGAATTGAAATATAC
AATCTAAACCAAAATTTATCTTTTTTTTATCTTATATTGTAGAACCACAA
GGCCTCCGTCCTATATTTTCTATTTTGGAATTTTTTTAAAAACGGGCATA
ACAAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041231XLOC_041231Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065817-exon-scaffold_445-1575043694:73730..73950TCONS_00065817-exon-scaffold_445-1575043694:73730..73950Clytia hemisphaericaexon
TCONS_00065817-exon-scaffold_445-1575043694:64997..65068TCONS_00065817-exon-scaffold_445-1575043694:64997..65068Clytia hemisphaericaexon
TCONS_00065817-exon-scaffold_445-1575043694:64347..64414TCONS_00065817-exon-scaffold_445-1575043694:64347..64414Clytia hemisphaericaexon
TCONS_00065817-exon-scaffold_445-1575043694:63745..63827TCONS_00065817-exon-scaffold_445-1575043694:63745..63827Clytia hemisphaericaexon
TCONS_00065817-exon-scaffold_445-1575043694:63147..63239TCONS_00065817-exon-scaffold_445-1575043694:63147..63239Clytia hemisphaericaexon
TCONS_00065817-exon-scaffold_445-1575043694:62820..62856TCONS_00065817-exon-scaffold_445-1575043694:62820..62856Clytia hemisphaericaexon
TCONS_00065817-exon-scaffold_445-1575043694:62385..62528TCONS_00065817-exon-scaffold_445-1575043694:62385..62528Clytia hemisphaericaexon
TCONS_00065817-exon-scaffold_445-1575043694:61189..62128TCONS_00065817-exon-scaffold_445-1575043694:61189..62128Clytia hemisphaericaexon
TCONS_00065817-exon-scaffold_445-1575043694:59394..60218TCONS_00065817-exon-scaffold_445-1575043694:59394..60218Clytia hemisphaericaexon
TCONS_00065817-exon-scaffold_445-1510915933:73730..73950TCONS_00065817-exon-scaffold_445-1510915933:73730..73950Clytia hemisphaericaexon
TCONS_00065817-exon-scaffold_445-1510915933:64997..65068TCONS_00065817-exon-scaffold_445-1510915933:64997..65068Clytia hemisphaericaexon
TCONS_00065817-exon-scaffold_445-1510915933:64347..64414TCONS_00065817-exon-scaffold_445-1510915933:64347..64414Clytia hemisphaericaexon
TCONS_00065817-exon-scaffold_445-1510915933:63745..63827TCONS_00065817-exon-scaffold_445-1510915933:63745..63827Clytia hemisphaericaexon
TCONS_00065817-exon-scaffold_445-1510915933:63147..63239TCONS_00065817-exon-scaffold_445-1510915933:63147..63239Clytia hemisphaericaexon
TCONS_00065817-exon-scaffold_445-1510915933:62820..62856TCONS_00065817-exon-scaffold_445-1510915933:62820..62856Clytia hemisphaericaexon
TCONS_00065817-exon-scaffold_445-1510915933:62385..62528TCONS_00065817-exon-scaffold_445-1510915933:62385..62528Clytia hemisphaericaexon
TCONS_00065817-exon-scaffold_445-1510915933:61189..62128TCONS_00065817-exon-scaffold_445-1510915933:61189..62128Clytia hemisphaericaexon
TCONS_00065817-exon-scaffold_445-1510915933:59394..60218TCONS_00065817-exon-scaffold_445-1510915933:59394..60218Clytia hemisphaericaexon
TCONS_00065817-exon-scaffold_445-1491911889:73730..73950TCONS_00065817-exon-scaffold_445-1491911889:73730..73950Clytia hemisphaericaexon
TCONS_00065817-exon-scaffold_445-1491911889:64997..65068TCONS_00065817-exon-scaffold_445-1491911889:64997..65068Clytia hemisphaericaexon
TCONS_00065817-exon-scaffold_445-1491911889:64347..64414TCONS_00065817-exon-scaffold_445-1491911889:64347..64414Clytia hemisphaericaexon
TCONS_00065817-exon-scaffold_445-1491911889:63745..63827TCONS_00065817-exon-scaffold_445-1491911889:63745..63827Clytia hemisphaericaexon
TCONS_00065817-exon-scaffold_445-1491911889:63147..63239TCONS_00065817-exon-scaffold_445-1491911889:63147..63239Clytia hemisphaericaexon
TCONS_00065817-exon-scaffold_445-1491911889:62820..62856TCONS_00065817-exon-scaffold_445-1491911889:62820..62856Clytia hemisphaericaexon
TCONS_00065817-exon-scaffold_445-1491911889:62385..62528TCONS_00065817-exon-scaffold_445-1491911889:62385..62528Clytia hemisphaericaexon
TCONS_00065817-exon-scaffold_445-1491911889:61189..62128TCONS_00065817-exon-scaffold_445-1491911889:61189..62128Clytia hemisphaericaexon
TCONS_00065817-exon-scaffold_445-1491911889:59394..60218TCONS_00065817-exon-scaffold_445-1491911889:59394..60218Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_445supercontigscaffold_445:59394..73950 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
29.8818	39.1888	50.5765	59.9656	112.548	87.8357	117.818	136.293	67.2974	60.2188	69.9685	67.1603	43.6792	52.5216	40.9896	37.5352	71.2345	54.7208	35.8794	44.7866	45.8862	46.4468	40.1112	52.5588	46.1125	65.6669	50.5463	51.2814	60.0702	48.8531
Blast
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BLAST of TCONS_00065817 vs. Swiss-Prot (Human)
Match: RAB2A (Ras-related protein Rab-2A OS=Homo sapiens GN=RAB2A PE=1 SV=1)

HSP 1 Score: 382.104 bits (980), Expect = 1.627e-126
Identity = 181/191 (94.76%), Postives = 188/191 (98.43%), Query Frame = 2 
Query:  176 MHYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSSSNMVIMLIGNKSDLEARREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFIGTAKEIYQKIQEGILDLNNESNGIKIGPQH 748
            M YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHS+SNMVIMLIGNKSDLE+RREVKKEEGEAFAREHGLIFMETSAKTA+NVEEAFI TAKEIY+KIQEG+ D+NNE+NGIKIGPQH
Sbjct:    1 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGPQH 191
The following BLAST results are available for this feature:
BLAST of TCONS_00065817 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RAB2A1.627e-12694.76Ras-related protein Rab-2A OS=Homo sapiens GN=RAB2... [more]
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