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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00065820 ID=TCONS_00065820|Name=TCONS_00065820|organism=Clytia hemisphaerica|type=transcript|length=896bp
CTCCgcagctaaaaattgaaattttaaaaaagaactcgtattatgaaaat
gaaaaaagacacAACGGTAAGTGCGCTACGATTACGTAATACTTTGAAAT
CTAatgatatttttgaccattttttggcAAACACGTCTTTTTCTCAAGAG
AGAAAGTAGACAGaagaagaaggaaaagaaaaatagatgatttattttgc
aattgTAAAAATACCTGTTGTAGAAAAGATTCCAATCTCAGAAAAGGGTG
TCCCTGCAAAACAAGGGGTGTCAAATGCTCAGAAAAGTGTTCTTGTGGGA
AAAGAAAGAGCTAAGTTACAATTTCCAATTTAAAAAGCATAATAATCCAC
ATTTTAAAGAGTACAAAGTTCTTAGTAGTGGAAGCCAAGGGAAGATCAAA
CACACCTATTTTATATTTCTATGAAATCCAAATAATATGCATTGCATTAC
AGAAACCTTTATCATTGCTAACGAAATACTTAAGACCATAACCCCCTAAT
TCAGCATGCACACTTTCCAAAAATGGCCTCAAATCCACAGAATTCTTATA
GGAAAGTggtgtattttgcaattcaaaaaaataaagaatttagaatgttc
cataatatcaaccataaacagcctCAAGTCCTGAATTTTAGGGTAAAAAG
TCTTGGGAAGCCTTatgtccaaattttatttttctatgaagcACTGACAT
GAAATgtgtagccttaagtccaacacatctGGTTAATGGACTTAAAAACT
TGCtaagtatgaagattttaagttcAATTCAATACAGTCCAATAAATGCC
ATTTTCGAGCCTGTGGAACAAGCTATTAGAACCTCTTTTTAACCACAAAA
AGATAACTATAATGCCCCCATAATATCAAAAGTATGGACTCTTGGC Run BLAST on NCBI transcript from alignment at scaffold_445:25..920 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00065820 ID=TCONS_00065820|Name=TCONS_00065820|organism=Clytia hemisphaerica|type=transcript|length=896bp|location=Sequence derived from alignment at scaffold_445:25..920 (Clytia hemisphaerica)
GCCAAGAGTCCATACTTTTGATATTATGGGGGCATTATAGTTATCTTTTT
GTGGTTAAAAAGAGGTTCTAATAGCTTGTTCCACAGGCTCGAAAATGGCA
TTTATTGGACTGTATTGAATTgaacttaaaatcttcatacttaGCAAGTT
TTTAAGTCCATTAACCagatgtgttggacttaaggctacacATTTCATGT
CAGTgcttcatagaaaaataaaatttggacatAAGGCTTCCCAAGACTTT
TTACCCTAAAATTCAGGACTTGaggctgtttatggttgatattatggaac
attctaaattctttatttttttgaattgcaaaatacaccACTTTCCTATA
AGAATTCTGTGGATTTGAGGCCATTTTTGGAAAGTGTGCATGCTGAATTA
GGGGGTTATGGTCTTAAGTATTTCGTTAGCAATGATAAAGGTTTCTGTAA
TGCAATGCATATTATTTGGATTTCATAGAAATATAAAATAGGTGTGTTTG
ATCTTCCCTTGGCTTCCACTACTAAGAACTTTGTACTCTTTAAAATGTGG
ATTATTATGCTTTTTAAATTGGAAATTGTAACTTAGCTCTTTCTTTTCCC
ACAAGAACACTTTTCTGAGCATTTGACACCCCTTGTTTTGCAGGGACACC
CTTTTCTGAGATTGGAATCTTTTCTACAACAGGTATTTTTAcaattgcaa
aataaatcatctatttttcttttccttcttcttCTGTCTACTTTCTCTCT
TGAGAAAAAGACGTGTTTgccaaaaaatggtcaaaaatatcatTAGATTT
CAAAGTATTACGTAATCGTAGCGCACTTACCGTTgtgtcttttttcattt
tcataatacgagttcttttttaaaatttcaatttttagctgcGGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00065820-exon-scaffold_445-1491911889:25..920 | TCONS_00065820-exon-scaffold_445-1491911889:25..920 | Clytia hemisphaerica | exon |
| TCONS_00065820-exon-scaffold_445-1510915933:25..920 | TCONS_00065820-exon-scaffold_445-1510915933:25..920 | Clytia hemisphaerica | exon |
| TCONS_00065820-exon-scaffold_445-1575043694:25..920 | TCONS_00065820-exon-scaffold_445-1575043694:25..920 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_445 | supercontig | scaffold_445:25..920 . |
Blast
The following BLAST results are available for this feature:
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