TCONS_00065881 (transcript) - C. hemisphaerica

Overview
NameTCONS_00065881
Unique NameTCONS_00065881
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length150

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00065881 ID=TCONS_00065881|Name=TCONS_00065881|organism=Clytia hemisphaerica|type=transcript|length=150bp
ACCATTCTTAGCGCGTACATTAGCAATATGCAGAAGGACTGTTCTTGACC
TTATGCCTTCCTTTACTAGAAATTCGGATACCTCATAAGGCTTAAGCTTG
TCTGGTGCAAAAAACTCCTCCTTCTCTTCTTCGCTGTCCTGGCCTGAGTC
Run BLAST on NCBI

transcript from alignment at scaffold_447:351312..351461

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00065881 ID=TCONS_00065881|Name=TCONS_00065881|organism=Clytia hemisphaerica|type=transcript|length=150bp|location=Sequence derived from alignment at scaffold_447:351312..351461 (Clytia hemisphaerica)
GACTCAGGCCAGGACAGCGAAGAAGAGAAGGAGGAGTTTTTTGCACCAGA
CAAGCTTAAGCCTTATGAGGTATCCGAATTTCTAGTAAAGGAAGGCATAA
GGTCAAGAACAGTCCTTCTGCATATTGCTAATGTACGCGCTAAGAATGGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041279XLOC_041279Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065881-exon-scaffold_447-1491911889:351312..351461TCONS_00065881-exon-scaffold_447-1491911889:351312..351461Clytia hemisphaericaexon
TCONS_00065881-exon-scaffold_447-1510915933:351312..351461TCONS_00065881-exon-scaffold_447-1510915933:351312..351461Clytia hemisphaericaexon
TCONS_00065881-exon-scaffold_447-1575043694:351312..351461TCONS_00065881-exon-scaffold_447-1575043694:351312..351461Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_447supercontigscaffold_447:351312..351461 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00065881 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top