TCONS_00065906 (transcript) - C. hemisphaerica

Overview
NameTCONS_00065906
Unique NameTCONS_00065906
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3280

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00065906 ID=TCONS_00065906|Name=TCONS_00065906|organism=Clytia hemisphaerica|type=transcript|length=3280bp
aatgaatttatatATCATGAAAACGTTtctaattttggattttttctgaG
AAGGAAGGACACAGGTTTTTTGAATGTGTGTGTGAGTCAACCAAGCCATA
GATATTGAATTGGGGAatcagtttttgattttttgaattttttgaccgTT
TAGTGATAAAAAGATTCAAGATGGTTGTTGTAATAAGaaaatGTCTAGAC
CAAACTCAACAGTACTTCATCACGCAATAGCAACGGGCGATTTAGAGACC
GTTCAAAGCCTCTTAAAACAAGGTGTTGTGGACGCTGACACGAGACTACA
GGTTGACGAAGAGATTCTAGAGACGGCAAGTCGTAAAAGTTACACGTCCA
TCCGAAGCTATCGACAACAAAGTATGGCTAACGAAAACATTGCCGAAGAA
AATGAAAGCGAACTCACAACAATTGATGACCAGGAGGAAGAGAACAAATC
TAGTGAAACTGGAAATCATGATAACACATCCAGCAGTACATCCAGTGAAC
TTGAAACTGACGAATTTAAATCCAGTGAACTGAGAAGCGAGAATATTGAA
TCCACTGAAATAGATTTGGAGTTTAAAACGGCATCCATTGAAATTGACGA
TGAAGAAAAAGacagtgaaaatgaaattgaaaaaattatggAAGAATGcc
aacacgaggctgaaatcgaaaacGTAGTTCCAGAAGAAGAGACCCCTATT
GAAGATAGATACCTTAAAGCACAACCCATTGTGGGTATATCTACACCTCA
AGACGAGGCTGAAATAATAGTCCAAGATGATTTGGTAGAAGACCGACTGC
AGCCTGTGCTCCAACGATTGCGAGAGCCAGACATGGAAAGCTGTCAAAGC
GGCTCATCGACACCCTTATTGAACAATAACAGAGGATCACTCGCCGATGT
GATTGACTTGAAACTGAGAGACGATAATGAGGGTTTGTTTGAGCGAGCGC
CTTCGATGAGAGTAAATCCGATGAGTGAAGAAGGAGGTGCACCAAAGAAG
TTGATTCCAAGGTTCGANGAAACTGAGAGACGATAATGAGGGTTTGTTTG
AGCGAGCGCCTTCGATGAGAGTAAATCCGATGAGAGTAAATCCGATGAGT
GAAGAAGGGAGTGCACCAAAGAAGTTGATTCCAAGGTTGAAAAGGAAGAT
CTCGTTGAAGTTCAACAAGAAACCAAAAAGAGACCTCTTggatgaagatg
atgatgacGACTTGATTTATGAGAATCTGGTCAAAACAAAGAACGTCGAT
GACGCACAGcTTGACGAGAATTTCGAAGGTGTGGCTTTCTTCGAAGCAGT
CCGTGACGGTATGGATATGATAGTCCAAACATTGTTGGAAACCAGCGATA
ATTACCAACTCAACATGTTGGATGAGAACGGATTCACACCGGCAATGAAT
GCCGCATGGCACGGACAAGCAGACTGCTTACAAATCTTAATCAAGCACGG
TGCGAATACAGACCTCCGAACGGCTACCGGCTGTACCGCAGCACATTTTG
CCGCCGGACAAGGTAATGCAGAATGCCTTCAACTCCTGATCGACGATGAT
AAAGATCAGATAGATATTAAAACAAAATTCGGAGCAACGCCCTTGATTTT
ATCCGCCAAGGGCGGCCATAACGAATGTATGGAGATTCTCCTTGATGCAG
GTGCGGATGCAAACGTTCAGTACCGGGGAAAACAGAATGCGGTACTGTTC
GCAGCCGGAAACGGACATTATGAATGTCTCGAAACACTAATCGAGCATGA
AGTTAATCTGAATCAAACTAATTCCCAAAAAGTAACGCCCTTAATGAGGG
CGGTCCAACAAGGTCATAATACGTGTGTGGTGTTACTTACCGATAAGGGC
GCCGATATTAATCTGCAAGATGCGATCGGGCGGTCCGCCCTACATTTCGC
AGTCGAATATAACAACTCGAAGGGACTAAAATTGTTGTTACAACAGGGTG
CAAATGTGGATTTAAAAACGAAAGGTGGTTCGAAGCCGCTCGATTATGCT
GAGCGTTTTCAAAACACTCGCCTTGGAGAAATGATTGAAAATCATATTAA
CAAGCTCAGGGAAGAAGtcgaaaaggaaaaagaaattgaagtaCAAAAAC
AAATCGTCGAAGAGAAAGAGAACAAAGTTTCCTGTCTAAGTTTCAAACAT
ATATTTAGGCGCCGAAGTCGCAAAAATTCGGACGTTCAAAAAGCTGTATA
ACAAATAGAGGGGACCAATCTATATAGTATAGCAATATTGCAACGTAATA
TCTTGTATGTGATGGAAGGAGATTTGCTTTCTGTGGCCCTTATGAGGGAA
AAATGTTCTCGAGATGGGCACCAATAGGCGTTGAACCGAAACATCAAGCT
GCTTTGATAAACACAAATCTCACAAACAAAAAAGATAGTAAGACCATGTT
ccgacgttacggttccgttccgctccgaaacgaaacagTTCCGAAACAAG
TTTGAACATcgaaattcgaaacgtcaaaaagaagactttacacagtaaaa
cagatcgaaacggtttcacTCCACtaatcggaacggaactgctccatttt
cttgctccgaaacgttcctaaactaatatgaacactctcgatccgtaacg
aaaattaCACtagagcgaaacggaaccgtaatGGCTGAACAGGGTCTAAG
CAATCAAATATTGAAAAGATAGTCCTTTGAAATTGGCAATGATGTAAAAA
AGGAGAGAATCGTTTTCTGATGATATCTTATCATAAACTTGAGAGCACTT
GTAGTAAAGAAAACAAGGTGAGCGGATGTTCGGCGTCGAAAGATAAACAA
CAAACACTGTGATAATCGTTCCATAAAAGAGGGTGATACCTTATCATATG
CCAAAGAACACATTGAATCCTAATATGAGATTGAATTACCTCATAACTCG
TGTATATAATACCAAACATTGAATAATATGGATATAACAGGATCTTTGCT
ATGTTGTAACGCTCTGAACATTAGAGTAGTTTGTAGTGATATAATACGGA
TAAAATAAGATCTTTGCTATGTTGTAACGCTCTGAACATTAGAGTAGTTG
TAGTGGCATCTTAACAACTCGTTACTAGGCTATTTTGCGAATAATTTTAA
TTAAACTTTTATTATGGAGGGCTCCAATTCGTTTTTAAAAGAGCGAAATT
ATTAccttatattatattatatgtGTATATTCTTAATTCTATGAaattaa
tcttaaaatttctagtatccaagaagaaaaaaatctcatggGCCCCGGCG
ACCAGTTTGAAGTAAGGGGGGAAATATTGG
Run BLAST on NCBI

transcript from alignment at scaffold_448:325192..335960+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00065906 ID=TCONS_00065906|Name=TCONS_00065906|organism=Clytia hemisphaerica|type=transcript|length=10769bp|location=Sequence derived from alignment at scaffold_448:325192..335960+ (Clytia hemisphaerica)
aatgaatttatatATCATGAAAACGTTtctaattttggattttttctgaG
AAGGAAGGACACAGGTTTTTTGAATGTGTGTGTGAGTCAACCAAGCCATA
GATATTGAATTGGGGAatcagtttttgattttttgaattttttgaccgTT
TAGTGATAAAAAGATTCAAGATGGTTGTTGTAATAAGGTAAGAAAATTGG
ATCCATTGAAATAAACGAAGATATGATTTTAAATGTGACTTCTTTATAGG
CACCACTAGCGGAAACAAAATAGACTCAATTTATAACAGTTATATTAAAT
TGGcttaaatatgatttttaatactgtaaatttgaaaatcttgacAAACT
CGCGTTTTTTTTGTGGACTTTAAAACCACCAGAAAAAATAGTATTCTGTC
TGCATATGTTTTGAACAAAGATCGAAAACATGAGAATCCTCAATAGTGGT
CAAATTGGTATAATGTCCCATTTAACAAACAATCTACGACAATTGTTGAT
GAGTTTGAACTATTGCCAATATTTTGAGCcacttaaaaatcaaaacaaat
gctaTAAAATGGTACCTTatgacaaaatcaaaacaaaaaaagaggCAGCG
GCCACTCAAATTAGAAATTGTTGATATTAGGCCAGCTCTTGCGTTGCGAC
GAAAAACACGTCAGCAGAAAATCGTCAATTGACGTCAGAAACGCCCTTTT
GTTTAGACGTTctatattttaaattatttccTTTGTAAGTGATGaattga
attgttttgtttcgACATCAGAACTTTTGAGTTTTGGTTTTCATGGATTG
AAATACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCG
GTTTGGGCCTAAATccgcaaaaaccgcaaaatttagttcccgcaaaaatt
agttcccttaaggtatatgaTTTTAGCAGATATATTGAATCTTTTAATTT
GTGACAAAATCGGAAATGTAAGAGTTTAAgaagaataaaataaatttagc
tTCGGGTAAGAAAATGACACATATAGAGTGATTGAGGTCAGGTTGCTTAA
ATTTAATCTAACATAAATGGAAAGTTTATAAATCTTATTGTTAGCTGTTC
GTTGATTGAAATGTTCGttgattgaaataatttttgtaagaATAATCTCA
TAAGAACAGCTAAGACTAGACAGACACAAACACAAATAGTTAGAGATTTA
AATAGTCGAATACCTAAGTAAATAACTCTTGCCAGTAAAACCTAGGAAGC
GAGTTAGGTCATACtgtcaaaaaattataaaagacGAACTTCCAAACTAG
CTAAAAATTATGACATAGTTCTTAGGGAAAACTTtgtttaggggtcaatt
ttcatTACATTGTCAACATTTAATCACAAACAGATAAACACGAACATAAA
AAAGGAGATTTTTGACAGAATTGTCAGGACTGTGAAAGGGACACGTAAAA
AATACCTAAATGCGAGGAGAAATGGTAGAGGAGCTAATTTAGCCGGCATT
AACAACAAGTAATTGTTTATACGATTCTTTTGATTTAACAGCAGTTTAAG
AACAGTTTAGAGGTCTAGAATGACAAAAGGGGCTAAAAGTAGTGAAAATC
AGGTATAAAGGCAAACCTACCATCTCTAGTTCttttcctaaaaataagaa
caggataggGTCAATTTGAGGTTTAGAGGGCCAAAAGAGTAAGACCTGAG
CCTCGACGTACacgatgaaaatattttaaaacaaaaaaaggtCACATAAT
TAAGTCAAATGACTCTTACGAAGGCTCCCTATCTGAGGCAAGCTTAAAAG
GAAGGATTGTCAATTTACTGGTAATATAACAAAATGTTTTAATCTCTctt
cttttgatattttgttacCTCATAATGGAAAAAAcacttgaaaaatgaaa
gtttatCAAAATGGTTTTTTCATGGCTTGGTTTACATTAGGGAAAATCTA
ACTCTATAAAATGATTTAACAAAAGCATCTATAAAATTATGGAAACAGAA
GGACTCATCTCCAGAGAGATATTTACGGCTCTTAAAGGTAAGGGtttttc
aagaaagaaaaagcaCCGTGAAAGCACCGTAAAAGTAGCGTTTTATAGTA
AATTAGATCAAATAAACTTGTGCCGCTTAAAGAAACTTTTGCTTCAAAAA
GGTGAGAGGCCTGAACCACAgtcctcgttttcggggattggcgggttcaa
cctaaatttttcagaattgcGCGGAAGGGTATTCTATAATTCCTCTCTaa
tgggaaattggcccactCCTTTTAGAGCTTTAACGTAAACATTCATCAAC
TTGGCATCGGAATACTAGATAATCTGTAATTCAGACTAAATACCGCAGCA
TGCTAGAAAAGAAAGTGATAACCACAATGTCACAAGGTTACTTACAAACt
taaatgcctcgaaaatgaactaaaacttttatttcaaaaacatacaaaat
tttgttgattttaaaacCCTATTTACACTAAAGAGGTATTGACGCGATGT
GAATCAGCAAACAATAGAAGCCTCTTACCCAATCggaaatagttcttttt
atgtCATCTTTGTTTATCCAACTCGAGTGGTCATTGCACAAAAGAACATT
CTATAGAAATTAATGTCTTGTGAACTGATATTTTCTCgcctcattttgaa
atttatgtTTTCGTTAGTCGGACGGTTGGTTGTTTTGCGATAGTAATTTT
GACAAGATCACTTTTTGTACTAAAGGtgttgtaatttttttgttcgGTGT
ATAAAACGAGTCAAAAATTTACCATTCTGTTTTAGGTCTAATAGCATTTA
AACTGCTTgtaactttggatttttatcggaTAGGTATTATTGATTGGTTA
GCTTTGTTGCTTCATGCTGGATTATGATCTTACATTgaatttttatctgt
tttcgTAAACGTTGTCTGTCGTCCGAAAGTCGctttatacagttgacgct
ctcaaaatcgattttcaaggggattGGATTTTCATCTCTAATAGAAGAGC
GTCCTTtacgagagtttcttgttgacggtgactttcaaaaTTATCGAATT
ATGGAATGTATGGAATagtaaaaagtcaaattttagaaaacctTTAACTG
TAGTTTCTTGTTTTCGATAATATTCAAAGATGATGTCATTTTTATCGCAT
ATCTACCACAATTTGAATTTACcatgaaatattttgctattttttcttgT
CTAACTTCATTCAAacgtaaaaaaaataatcaaatttcagaaagtTTACG
GTAATCTTTTGAGGAATTACTAATTCTTAGACAAACGCAAAGAGTCAGTT
TCAGATCAAAAGATTCAACTGATGAAGCTTTATATTCCATGATTTTGGCA
AGTTTTGAAAGAGTTGTAGTTCGTGCACTGGCATTGAATTTTGATATGTT
AGTCGACATTCAGTCGAGTCAGTAGGTCAAGATAATGAGAGGGTTAGGTG
GCGAGAAATGCCTTTCACAGCAAAGAATCGTTGTATTTTATAAAGTTCAA
TTTTCATGAACCTATCCGAGAAAAGCTAGAGTGTTTTAGAGGACATCATT
CAACGTctctcctaccatttgcttacacagcatttttaaaacaaaagaaa
gaacatcGTTCTCCCATTTCACAGCACAAAGTTAAAGGGCATTCTCTTTA
AAAGACATCATTTAACGTATCTCCtatcatttgcttacacagcattttta
aaacaaaagaaagaacatcGTTCTCCCATTTCACAGCACAAAGTTAAAGG
GCATTCTCTTTAAAAGACATCATTTAACGTATCTCCtatcatttgcttac
acagcatttttaaaacaaaagaaagaacatcGTTCTCCCATTTCACAGCA
CAAAGTTAAAGGGCATTCTCTTTAAAAGACATCATTTAACGTATCTCCta
tcatttgcttacacagcatttttaaaacaaaagaaagaacattgTTCTCC
CATTTCACAGCACAAAGTTAAAGGGCATTCTCTTCAAAAGACATCATTTA
acgtatctcctaccatttgcttacacagcatttttaaaacaaaagaaaga
acattgTTCTCACATTTCACAGCACAAAGTTAAAGGGCATTCTCTTCAAA
AGACATCATTTAacgtatctcctaccatttgcttacacagcatttttaaa
acaaaagaaagaacattgTTCTCACATTTCACAGCACAAAGTTAAAGGGC
ATTCTCTTCAAAAGACATCATTTAacgtatctcctaccatttgcttacac
agcatttttaaaacaaaagaaagaacattgTTCTCACATTTCACAGCACA
AAGTTAAAGGGCATTCTCTTCAAAAGACATCATTCAACGTctctcctacc
atttgcttacacagcattttttaaacaaaagaaagaataaCTTTATCCAC
TTCCCGCACCACTCGCATAAATTTTGAGGAATTCTGCTTTATCAGTACAT
GGGCCTCagcgagccattttgagtgagggggccaacattttggaaaacaa
tgtcggccaccatggttgggcaacgaagcaaatttttcactttttacacc
ctcaaaacactttaaaacgatatctaattggggagaatagtagtttttgt
ggtttgatttgatctcaaaccagcttaaaatagtaactcttaaaaacgta
tgacatggtCTACCAAAAAATGGAGGGGCCATGGACCCCCCNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgcccccccccccc
cgttgacGGAGCCCATGCAGTATAAAAGGTTTGCCTCTAATATGCATCCA
TCTTTAACTTATTTTGCTTGTTTTCCGCACACGtcgaaacattacgtcat
taaaaTCATGAATTGATGCTAGATCCTATCTATCAGACAGGGCCTTTTTA
ATGAAGGAACCAaaacagtacacgttttttataagaacaaactatataag
aacataaggcttcgatagccaaaatgttaagaacaagttaagaatatttt
aaggctttgcagacatCGACTTTCATAGGAAaatatggacaaaaatactc
aaaaaatggcgaaaataagaacatgttaagaacatttttaggctttaaaa
ttaaaaagttaagaacattccaaggcttcaaaaattttggatgtttttat
aaaaaaacgagtAGTTTTCGTTCTCAAACAGGTTTAAACTCCTCCTCTTA
CGAAGCCGTGAGAGATCCGAAGACTGGCTCTGTTTGAAGACGGATTAGAT
GAGACTTTAAATAGTATTTAATTAGGGAAGTTTGAGTGTATATAAAGTAT
AAGTGTCAGTAGGTAGTCAAACATCAAGTCAACAGAATGACTATTATCCT
CAGTATAGATAAATATTGAATATATTTTGGTCCAAAGCAatagatatttt
tttcaatattttctcaaGGGATACGAGTGATGAGTTAAAGAAATGGTCTT
GTCAATAAATATCTCGTAAGCCTCATTTGACCAAATCATCCATGCATACC
TAAGAGAAATACCAAGAACCTGAAATCCCAAATCTCCTCATTTCTACTTT
CtcattatttcttcttttagaaaatGTCTAGACCAAACTCAACAGTACTT
CATCACGCAATAGCAACGGGCGATTTAGAGACCGTTCAAAGCCTCTTAAA
ACAAGGTGTTGTGGACGCTGACACGAGACTACAGGTAAAcccgatttccc
cgattttcacTTGATTTCACCGATTAAAGAGATCGTTATAGTTTTGTAAA
GTCATCCTCCACATGTGGAAAACTGTCATTATTTGAAGATGCGATAGCTA
ACTGAAAACCTATATCATCTTAtccgaatctttaaaaaataagcCTCTCA
AACTTTCGGTGTCTCCTGGCCAACTATTTCTGTAATTTGATTATATGACT
AACAAACTCAAAATAAGTTTTCTCGCTTTCACTGTTCAGTGTTCGATAGA
GTACACTTCGATCcctaatttaaaatatttgatatCTGTGATAATAAAAG
GTTGTACAGGTATGATTTGgggaaaaatttgaataattcaACCCGTTGTT
TCTTTATCTTAGGTTGACGAAGAGATTCTAGAGACGGCAAGTCGTAAAAG
TTACACGTCCATCCGAAGCTATCGACAACAAAGTATGGCTAACGAAAACA
TTGCCGAAGAAAATGAAAGCGAACTCACAACAATTGATGACCAGGAGGAA
GAGAACAAATCTAGTGAAACTGGAAATCATGATAACACATCCAGCAGTAC
ATCCAGTGAACTTGAAACTGACGAATTTAAATCCAGTGAACTGAGAAGCG
AGAATATTGAATCCACTGAAATAGATTTGGAGTTTAAAACGGCATCCATT
GAAATTGACGATGAAGAAAAAGacagtgaaaatgaaattgaaaaaattat
ggAAGAATGccaacacgaggctgaaatcgaaaacGTAGTTCCAGAAGAAG
AGACCCCTATTGAAGATAGATACCTTAAAGCACAACCCATTGTGGGTATA
TCTACACCTCAAGACGAGGCTGAAATAATAGTCCAAGATGATTTGGTAGA
AGACCGACTGCAGCCTGTGCTCCAACGATTGCGAGAGCCAGACATGGAAA
GCTGTCAAAGCGGCTCATCGACACCCTTATTGAACAATAACAGAGGATCA
CTCGCCGATGTGATTGACTTGAAACTGAGAGACGATAATGAGGGTTTGTT
TGAGCGAGCGCCTTCGATGAGAGTAAATCCGATGAGTGAAGAAGGAGGTG
CACCAAAGAAGTTGATTCCAAGGTTCGANGAAACTGAGAGACGATAATGA
GGGTTTGTTTGAGCGAGCGCCTTCGATGAGAGTAAATCCGATGAGAGTAA
ATCCGATGAGTGAAGAAGGGAGTGCACCAAAGAAGTTGATTCCAAGGTTT
AGACCATTTCTTCTTTTAACTTCTTTCTTGTAGACTTCTCAGTTATAATT
TCAATTCCTTGTGAACTTCTCAGTTATAACTCTGTGACTTGAAATCTCTC
CATTACTTGAGTACATCTATCGCCTATTGCATCTTCTTCAGCTCCATATT
CTTATAATTGGCTTTCTACAAGGCAAACTCTTCATAATTCGAACATTTCG
TGTTCTTTTGAGCGTCTAAGTTAGAGTTACAAACCAAAAATAACAATGCT
ATATCGCGATCCAAACTAGATATctaagatttaatttttttaaagattgg
taCTGTTTAAAGTTCCTGGTAAGGctaaacttcatttttgaagATCAATC
TTTGAAAAAGGATGTTCTATTTTGACATAGGTTGAAAAGGAAGATCTCGT
TGAAGTTCAACAAGAAACCAAAAAGAGACCTCTTggatgaagatgatgat
gacGACTTGATTTATGAGAATCTGGTCAAAACAAAGAACGTCGATGACGC
ACAGGTGAGTGGTATTGAGAGTTGCCAGGTGGTCTTTCATGGAGTGACTT
TTTGGCTGAATGTtcttgttttggtgttttttttttgctatttgatCAGA
GAGTTTCTCATTTcgttgattttttaaggaaaatgtcATTGGGTGGACCC
CAATACTTACTAGCAAAAAGTCCCTTTTAAGTTGTCCTTTTTCGATACAT
TCAGACTTACTGTGTGCTTGCCCGAGCTACTGAATCAACTGTATCTCTAA
AAtctgattattttgaatttcagcTTGACGAANAGGATATAGGATCTAGT
AACAACTTCTTTTTCAACCacttctcaatatatttcagcTTGACGAGAAT
TTCGAAGGTGTGGCTTTCTTCGAAGCAGTCCGTGACGGTATGGATATGAT
AGTCCAAACATTGTTGGAAACCAGCGATAATTACCAACTCAACATGTTGG
ATGAGAACGGATTCACACCGGCAATGAATGCCGCATGGCACGGACAAGCA
GACTGCTTACAAATCTTAATCAAGCACGGTGCGAATACAGACCTCCGAAC
GGCTACCGGCTGTACCGCAGCACATTTTGCCGCCGGACAAGGTAATGCAG
AATGCCTTCAACTCCTGATCGACGATGATAAAGATCAGATAGATATTAAA
ACAAAATTCGGAGCAACGCCCTTGATTTTATCCGCCAAGGGCGGCCATAA
CGAATGTATGGAGATTCTCCTTGATGCAGGTGCGGATGCAAACGTTCAGT
ACCGGGGAAAACAGAATGCGGTACTGTTCGCAGCCGGAAACGGACATTAT
GAATGTCTCGAAACACTAATCGAGCATGAAGTTAATCTGAATCAAACTAA
TTCCCAAAAAGTAACGCCCTTAATGAGGGCGGTCCAACAAGGTCATAATA
CGTGTGTGGTGTTACTTACCGATAAGGGCGCCGATATTAATCTGCAAGAT
GCGATCGGGCGGTCCGCCCTACATTTCGCAGTCGAATATAACAACTCGAA
GGGACTTNATGCGATCGGGCGGTCCGCCCTACATTTCGCAGTCGAACATA
ACAACTCGAAGGGACTAAAATTGTTGTTACAACAGGGTGCAAATGTGGAT
TTAAAAACGAAAGGTGGTTCGAAGCCGCTCGATTATGCTGAGCGTTTTCA
AAACACTCGCCTTGGAGAAATGATTGAAAATCATATTAACAAGCTCAGGG
AAGAAGtcgaaaaggaaaaagaaattgaagtaCAAAAACAAATCGTCGAA
GAGAAAGAGAACAAAGTTTCCTGTCTAAGTTTCAAACATATATTTAGGCG
CCGAAGTCGCAAAAATTCGGACGTTCAAAAAGCTGTATAACAAATAGAGG
GGACCAATCTATATAGTATAGCAATATTGCAACGTAATATCTTGTATGTG
ATGGAAGGAGATTTGCTTTCTGTGGCCCTTATGAGGGAAAAATGTTCTCG
AGATGGGCACCAATAGGCGTTGAACCGAAACATCAAGCTGCTTTGATAAA
CACAAATCTCACAAACAAAAAAGATAGTAAGACCATGTTccgacgttacg
gttccgttccgctccgaaacgaaacagTTCCGAAACAAGTTTGAACATcg
aaattcgaaacgtcaaaaagaagactttacacagtaaaacagatcgaaac
ggtttcacTCCACtaatcggaacggaactgctccattttcttgctccgaa
acgttcctaaactaatatgaacactctcgatccgtaacgaaaattaCACt
agagcgaaacggaaccgtaatGGCTGAACAGGGTCTAAGCAATCAAATAT
TGAAAAGATAGTCCTTTGAAATTGGCAATGATGTAAAAAAGGAGAGAATC
GTTTTCTGATGATATCTTATCATAAACTTGAGAGCACTTGTAGTAAAGAA
AACAAGGTGAGCGGATGTTCGGCGTCGAAAGATAAACAACAAACACTGTG
ATAATCGTTCCATAAAAGAGGGTGATACCTTATCATATGCCAAAGAACAC
ATTGAATCCTAATATGAGATTGAATTACCTCATAACTCGTGTATATAATA
CCAAACATTGAATAATATGGATATAACAGGATCTTTGCTATGTTGTAACG
CTCTGAACATTAGAGTAGTTTGTAGTGATATAATACGGATAAAATAAGAT
CTTTGCTATGTTGTAACGCTCTGAACATTAGAGTAGTTGTAGTGGCATCT
TAACAACTCGTTACTAGGCTATTTTGCGAATAATTTTAATTAAACTTTTA
TTATGGAGGGCTCCAATTCGTTTTTAAAAGAGCGAAATTATTAccttata
ttatattatatgtGTATATTCTTAATTCTATGAaattaatcttaaaattt
ctagtatccaagaagaaaaaaatctcatggGCCCCGGCGACCAGTTTGAA
GTAAGGGGGGAAATATTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041295XLOC_041295Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065906-exon-scaffold_448-1491911889:325192..325378TCONS_00065906-exon-scaffold_448-1491911889:325192..325378Clytia hemisphaericaexon
TCONS_00065906-exon-scaffold_448-1510915933:325192..325378TCONS_00065906-exon-scaffold_448-1510915933:325192..325378Clytia hemisphaericaexon
TCONS_00065906-exon-scaffold_448-1575043694:325192..325378TCONS_00065906-exon-scaffold_448-1575043694:325192..325378Clytia hemisphaericaexon
TCONS_00065906-exon-scaffold_448-1491911889:331712..331825TCONS_00065906-exon-scaffold_448-1491911889:331712..331825Clytia hemisphaericaexon
TCONS_00065906-exon-scaffold_448-1510915933:331712..331825TCONS_00065906-exon-scaffold_448-1510915933:331712..331825Clytia hemisphaericaexon
TCONS_00065906-exon-scaffold_448-1575043694:331712..331825TCONS_00065906-exon-scaffold_448-1575043694:331712..331825Clytia hemisphaericaexon
TCONS_00065906-exon-scaffold_448-1491911889:332204..333037TCONS_00065906-exon-scaffold_448-1491911889:332204..333037Clytia hemisphaericaexon
TCONS_00065906-exon-scaffold_448-1510915933:332204..333037TCONS_00065906-exon-scaffold_448-1510915933:332204..333037Clytia hemisphaericaexon
TCONS_00065906-exon-scaffold_448-1575043694:332204..333037TCONS_00065906-exon-scaffold_448-1575043694:332204..333037Clytia hemisphaericaexon
TCONS_00065906-exon-scaffold_448-1491911889:333422..333545TCONS_00065906-exon-scaffold_448-1491911889:333422..333545Clytia hemisphaericaexon
TCONS_00065906-exon-scaffold_448-1510915933:333422..333545TCONS_00065906-exon-scaffold_448-1510915933:333422..333545Clytia hemisphaericaexon
TCONS_00065906-exon-scaffold_448-1575043694:333422..333545TCONS_00065906-exon-scaffold_448-1575043694:333422..333545Clytia hemisphaericaexon
TCONS_00065906-exon-scaffold_448-1491911889:333880..334528TCONS_00065906-exon-scaffold_448-1491911889:333880..334528Clytia hemisphaericaexon
TCONS_00065906-exon-scaffold_448-1510915933:333880..334528TCONS_00065906-exon-scaffold_448-1510915933:333880..334528Clytia hemisphaericaexon
TCONS_00065906-exon-scaffold_448-1575043694:333880..334528TCONS_00065906-exon-scaffold_448-1575043694:333880..334528Clytia hemisphaericaexon
TCONS_00065906-exon-scaffold_448-1491911889:334589..335960TCONS_00065906-exon-scaffold_448-1491911889:334589..335960Clytia hemisphaericaexon
TCONS_00065906-exon-scaffold_448-1510915933:334589..335960TCONS_00065906-exon-scaffold_448-1510915933:334589..335960Clytia hemisphaericaexon
TCONS_00065906-exon-scaffold_448-1575043694:334589..335960TCONS_00065906-exon-scaffold_448-1575043694:334589..335960Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_448supercontigscaffold_448:325192..335960 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	1.05824	0.69875	2.72827	3.4903	1.37484	12.2963	8.64467	13.5387	20.1809	12.8187	15.2276	1.95429	2.90611	6.53033	5.08412	2.38569	1.15423	1.85427	3.40991	6.15145	4.49934	13.2184	17.3595
Blast
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BLAST of TCONS_00065906 vs. Swiss-Prot (Human)
Match: DAPK1 (Death-associated protein kinase 1 OS=Homo sapiens GN=DAPK1 PE=1 SV=6)

HSP 1 Score: 112.849 bits (281), Expect = 5.842e-25
Identity = 82/252 (32.54%), Postives = 133/252 (52.78%), Query Frame = 3 
Query: 1251 DAQLDE--NFEGVAFFEAVRDGMDMIVQTLLETSDNYQLNMLDENGFTPAMNAAWHGQADCLQILIKHGANTDLRTATGCTAAHFAAGQGNAECXXXXXXXXXXXXXXXTKFGATPLILSAKGGHNECMEILLDAGADANVQYRGKQNAVLFAAGNGHYECLETLIEHEVNLNQTNSQKVTPLMRAVQQGHNTCVVLLTDKGADINLQDAIGRSALHFAVEYNNSKGLKLLLQQGANVDLKTKGGSKPLDYA 2000
            D  LDE  +F   A   A+ D     +Q LL +  NY +N  +++G  P + AA  G    LQ+LIK G+  D++   G  A ++AA  G+ +     + ++K  +D+K K G   L ++A+ GH +  ++L   G++ N+Q + ++  +  AA +G+Y   + L E   N+N  N +  TPL+ A  +G++  V  L + GAD+N  D  G  ALH AV     + +K LL QG  VD + + G+ PL  A
Sbjct:  334 DDTLDEEDSFVMKAIIHAINDDNVPGLQHLLGSLSNYDVNQPNKHGTPPLLIAAGCGNIQILQLLIKRGSRIDVQDKGGSNAVYWAARHGHVD-TLKFLSENKCPLDVKDKSGEMALHVAARYGHADVAQLLCSFGSNPNIQDKEEETPLHCAAWHGYYSVAKALCEAGCNVNIKNREGETPLLTASARGYHDIVECLAEHGADLNACDKDGHIALHLAVRRCQMEVIKTLLSQGCFVDYQDRHGNTPLHVA 584
The following BLAST results are available for this feature:
BLAST of TCONS_00065906 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DAPK15.842e-2532.54Death-associated protein kinase 1 OS=Homo sapiens ... [more]
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