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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00065908 ID=TCONS_00065908|Name=TCONS_00065908|organism=Clytia hemisphaerica|type=transcript|length=618bp
cttATTTGTTGATTGTTGCCATATTCATAACAAAAGGGTAGATAGATGAT
AGAGTCTCCTAGAGTTTTGAACATAGAAGAATAATGATTATATCTTAAGA
GTTGAGAAATCGAAGAAGATTGTTTGGTATAAAAACTCTCGGCAAAGACA
AGTGGAAACGTGAAATTGGAATCGGCGAAACAAAACAGAGATATCTGGCT
ATCGTGCCGTATTATTTGAAAACCCACAGAAAACTGGAGTTTAAAGGAAC
TTGATTACATGATATTTTTTGGGAAAGTTTTTGTGACCACACTATGGATT
TCATGTTGAAACATATCGTCATAACCATGTTCACTTTCATTACAATGTAT
CTATGTTTACAATATATCGTTTACTGTGTGACCAGGGATATCACCAAGGa
ttttgatgacatcagcagAATTCGATTTGCTGATCATAATGGGTCGAGTT
ATCGTTCAAATAGACCAAAATTTTTGACACCTTCttattgaagatgaaga
tgaaaggGTGCTTCGAACTTTGAGCCTGTCTTAAAGATTAGAAAGCTAGA
TAGTAAGAGTCACTGACCCTTAGTGATTTACTATTTGTCCTGTTCAGAgG
caatttcccaaaatattt Run BLAST on NCBI transcript from alignment at scaffold_448:452718..453890+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00065908 ID=TCONS_00065908|Name=TCONS_00065908|organism=Clytia hemisphaerica|type=transcript|length=1173bp|location=Sequence derived from alignment at scaffold_448:452718..453890+ (Clytia hemisphaerica)
cttATTTGTTGATTGTTGCCATATTCATAACAAAAGGGTAGATAGATGAT
AGAGTCTCCTAGAGTTTTGAACATAGAAGAATAATGATTATATCTTAAGA
GTTGAGAAATCGAAGAAGATTGTTTGGTATAAAAACTCTCGGCAAAGACA
AGTGGAAACGTGAAATTGGAATCGGCGAAACAAAACAGAGATATCTGGCT
ATCGTGCCGTATTATTTGAAAACCCACAGAAAACTGGAGTTTAAAGGAAC
TTGATTACATGATATTTTTTGGGAAAGTTTTTGTGACCACACTATGGATT
TCATGTTGAAACATATCGTCATAACCATGTTCACTTTCATTACAATGTAT
CTATGTTTACAATATATCGTTTACTGTGTGACCAGGGATATCACCAAGGa
ttttgatgacatcagcagAATTCGATTTGCTGATCATAATGGGTCGAGTT
ATCGTTCAAATAGACCAAAATTTTTGACACCTTCttattgaagatgaaga
tgaaaggGTGCTTCGAACTTTGAGCCTGTCTTAAAGATTAGAAAGCTAGA
TAGTAAGAGTCACTGACCCTTAGTGATTTACTATTTGTCCTGTTCAGAgg
taggctgcatgcatccccaaattagttttgatataggggatgNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNtgtattttgcagaattttggcgacttgtatttttcaaaaaactc
gatgtgtattgtttgagttatttgatgacgtaaatagaaatcaaataaag
attcaaataaaagaacatatggctagaaatctctctttctcctctctttc
tttttgtttatcgaaattaattgaattagcaaacaaaactctcaagataa
taaaagacgacaaactgtcaatcaaagttctctatcattcaactcttttt
ttggttagcagattttttgctaagttcggaacggttttgagagcctgatt
cgcatcccctatatcaaaacttatcagaggggatgtgtgcagcctagtTC
AGAGGcaatttcccaaaatattt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00065908-exon-scaffold_448-1491911889:452718..453316 | TCONS_00065908-exon-scaffold_448-1491911889:452718..453316 | Clytia hemisphaerica | exon |
| TCONS_00065908-exon-scaffold_448-1510915933:452718..453316 | TCONS_00065908-exon-scaffold_448-1510915933:452718..453316 | Clytia hemisphaerica | exon |
| TCONS_00065908-exon-scaffold_448-1575043694:452718..453316 | TCONS_00065908-exon-scaffold_448-1575043694:452718..453316 | Clytia hemisphaerica | exon |
| TCONS_00065908-exon-scaffold_448-1491911889:453872..453890 | TCONS_00065908-exon-scaffold_448-1491911889:453872..453890 | Clytia hemisphaerica | exon |
| TCONS_00065908-exon-scaffold_448-1510915933:453872..453890 | TCONS_00065908-exon-scaffold_448-1510915933:453872..453890 | Clytia hemisphaerica | exon |
| TCONS_00065908-exon-scaffold_448-1575043694:453872..453890 | TCONS_00065908-exon-scaffold_448-1575043694:453872..453890 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_448 | supercontig | scaffold_448:452718..453890 + |
Blast
The following BLAST results are available for this feature:
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