TCONS_00065912 (transcript) - C. hemisphaerica

Overview
NameTCONS_00065912
Unique NameTCONS_00065912
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2035

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00065912 ID=TCONS_00065912|Name=TCONS_00065912|organism=Clytia hemisphaerica|type=transcript|length=2035bp
CTGTCAGCGCGATAAGACTTCAAAGAAACTACTGCTGGAAGTAGGCTAGT
AAAATTCCAAAGTTTAGGGAAAgggaacggaacggaacggacGGAAGACA
CTACAAACAGCTCTTGACGTCCTCGAATCAcactttgtcaatttttagaA
CGTTCCCCCTCTTTTCAGCATTGAATTCTGAAAGATTCAGATCTCTATAT
ACAAGGATCAACGTGCAATGAGATGAGAATAAAAATTTCGGACATTTTCA
AAGATGTCAGAGCAACCTAACAGAAGAATGGGCAAGGGAGAGAAGAAACG
CCCACTAAAAATTGTCATGCCTCCTGTTCACCAAACGCAACCTCAACCAG
TaaatgctccaAGGAATTTATCAGATAGAACCACATTAACTGTGAACAGC
CAGGATTACCCGTGCAGTACTGATGATTTGATAGAAATATGCGAGCTTGG
TCGTGGGGCCTATGGGGTTGTAGAAAAAATGAGACATAAACAAACTAACA
TAGAAATGGCTGTGAAGCGTATTAGGCACACGGTCAACACGACAGAGCAA
GGTCGTCTATTAATGGATTTAGATGTTTCAATGAGACTTAGTAATTACCC
CTATGCCATCCAGTTTTATGGTGCACTCTTCAAAGAGgGAGATGTTTGGA
TATGCATGGAACTCATGAAAACATCATTCgataaattttataaaaaagtt
gcAGAGCAAGAAGGGGCTTTGATACCTGAAAAAGTACTGGGAAAAATATC
CTTCGCTGTTGTTTCTGCATTGGAATATTTACATAGTAAAATGAAAGTAA
TCCACAGAGATGTCAAACCGTCCAATATATTAGTTAATGATAACGGAGAG
ATCAAATTATGTGACTTTGGAATCAGCGGACAACTGGTTGACTCTCTGGC
AAAAACCCTTACAGCTGGCTGTAAGCCCTATATGGCTCCTGAACGTATCA
ACCCAACGAAGGGACAACATGGTTATGATATACGTTCTGATGTGTGGAGC
TTAGGAATCACCATGGTCGAACTGGCATGTTTGAAATTCCCCTACAGCAG
GTGGACAACACCTTTCGATCAATTAAAAGCAGTGGTAGAGGAGCCTTCGC
CTACGATACCATCCGAACATAATTATTCTGATGAACTTCATCAATTTATT
TCACTTTGtttgaagaaGAACTTCCTGGAAAGACCAAAATATGACACTCT
ATTGACGGACTCATTCATCCTGACTCACGAGAAAACACCGGTTAACGAAA
TCGCAGGCTTCGTTCAACCCATCCTGGACCAAGTATGAATGACTAAACGT
CACATGTCAATCAAATGACGTcatatgacgtaatcttttcgaAAATGGGA
GTGTCTTTACAATTcaagtttttttggcaaattgtGCTGGCTATGACACT
GCTTGGCTTAAATGACGTCACTTTCTATAAGAAATCGAACCACAGAAATT
CATCGAATGAATATACCTACCAGCCCTCGTGTCGTATAGAACTCTATAAA
AGCGGACCGGACTTCAAGTTTACTGGGACCGAATGACACCAATCAGTCTC
AAGTCAATATTATGACTCTCACAGCTTTtagaaatatttgacgtcattcG
ATCTCGATAAACTCGGGTCCAACCCCCTTGAGTTGATTGGTTTTATTCAA
AGCCTAAAAGGCCTGAGCTTTAAAGACATTTGTTACATTGTTAGTTCGAT
GTAAATCGAatattttttatagttttttgtGGAGAAAGCGAAATGAATTA
TGGGAATGTTGCATTGCATTGCTTGGCAATGTTAGTGCTTAGTTTTCATC
TTTCGTCAAATCAGCTTTTTCTTGTTAAACGTtgtttagctctagtttag
acggcccatcttttgccctgcctattctgattgtgaattaaagtgggctg
tctaaagtcaaagCAATGTCCTCTTTTGACGCTAATGCAATATTGTCttc
tttcaaacttttccagcttttccaagcaaagattttaactaccAAGTTTG
TGCCCTCTTTCTATCTACTCTAACAATTAAAATAG
Run BLAST on NCBI

transcript from alignment at scaffold_448:528596..544571+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00065912 ID=TCONS_00065912|Name=TCONS_00065912|organism=Clytia hemisphaerica|type=transcript|length=15976bp|location=Sequence derived from alignment at scaffold_448:528596..544571+ (Clytia hemisphaerica)
CTGTCAGCGCGATAAGACTTCAAAGAAACTACTGCTGGAAGTAGGCTAGT AAAATTCCAAAGTTTAGGGAAAgggaacggaacggaacggacGGAAGACA CTACAAACAGCTCTTGACGTCCTCGAATCAcactttgtcaatttttagaA CGTTCCCCCTCTTTTCAGCATTGAATTCTGAAAGATTCAGATCTCTATAT ACAAGGATCAACGTGCAATGAGATGAGAATAAAAATTTCGGACATTTTCA AAGATGTCAGGTATGTGTTTTTTCAGGGCCATTTTGCGTTGTTCGTAAAT TTCTTTTTGGTTGCCGACACTTTTCCCTTTGCTCACAGTTTTGTTCTATG AAGCTCACAGTCTTAaaatgaatagaccttttttcaaagaggccaccctg ttgaataattatgtagtccagcagaaaaacaatgataaaaccatgcataa ttatcacaatatgcatgatacagtaattatgcatggctctatcattgttt ttatggctggactacataaccagacgatgtcaatcgaacggaatcgaaca aaaattccaatcgaatcaatcgaacgcaatcgaatgattgcgattcgatt gccaaacgcaatcgaatatcaatcgaacgtaaaattctgggtaaaattcg attgattcgattgatattcgattacgttcgattgatgttcgattacgttc gattgatgttcgattacgttcgactgcGTTCGACGGGTGGTCAATTAAAT TAGATTCCAATTtacctcaattcctttcaaGGTGATATGGAAATCGCGAA CCGGCCAAACAGCCATCGTACTCGTAGATTTTGCGGGCAACGTGACATAC AGCCGTCTTTTCTTCGATTCATATCATCTCGTTTAACGCTTCAAATGTTG AACAAGAATCAACgttaatcaacagaatcaattagtcgaaccagtcgaat gcaTAAGCCAATCGAACGtagtcgaatcaatcgaatacattagtcaatcg aacgcaatcgaatcaatcgaacacagtcgaatcaatcgaatcaatcgaat ccaggcactaatcgaacgcaatcaaatcaatcgaacacagtcgaatcaat cgaatacattagtcaatcgaacgcaatcgaatcaatcgaacacagtcgaa tcaatcgaatcaatcgaatccaggcactaatcgaacgcaatcaaatcaat cgagaaaatcgcggtaatattcgattgacattcgattgcgttcaattgat tcggcgttcgatttgttcgattgacatcgtctggacataattattcaaca gggtggcctctttgaaaaatattattcctttctctaaaaaagaagggtgt cggaattagacgaggcgAGGGATGTCCAAACGATcccaatcgaacggaat cgacgatcaaaccagtcgaaccaaatcaaacgcaatcgaccgggttattt ttttcttgtattttttgaaattgtctggTACTGTTGGATtctagaggagg ggtgtcgatattagaccaagttGCGGTACGCACCACCACTAAGGGGGaag ggggtcttctcaaaagcgtatgcttgctaACAGggcacaagtgttacgcg taagccaaatcgcgtattatgaacaacctctaaattgctgattacaggag aaaaaaaatcgaaattcaaaatggcagcCAAGCCCAcactgataactatc aaaaatctttgtttttcaatcagctaccgtgagattgggtaacttgcatc agtggaggcaaacatgcataaacctcaaatgaaagacctgtattaagttg aagttggtttgatattctacgtttgacgtttgatattcgtttgatattct caaatttgcgttttgaagtttttgtgactacttttggaactggaaactat tggaagccaatagactTTATTCTCAAGtgtgtctgtgcaaaatttcagcg ctctccgtcgcagtgtgctccctctaaaaatttgtaaccgtcaaacctca tttcggccgaaatgacaagttgggctcctgtgggggagagcggttatctt tggaattggaaactattggaagccaatagagtttattctcaagggtgtct gtgcaaaatttcagcgctcttcgacgcagtgtgctccctctaaaaatttg taaccgtcaaacctcatttcggccgaaatgacaagttgggctcctttGGG GGAGAGTGGTTATcattggaattggaaactattggaagccaatagagttt attctcaagggtgtgtgtgcaaaatttcagcgctctccgtcgcagcgtgc tccctctaaaaatttgtaaccgttaaacctcatttcggccaaaatgacaa gttgggctcctgtgggggagagtggttatctttggaactggaaactattg gccatttttagagggagcacgctgcgacgaagagcgctgaaattttgctt ccaatagtttccagttccaaagataaccactctcccccacaggagcccaa cttgtcattttggccgaaatgaggtttaacggttaccaatttttagaggg agcacgctgcgacgaaGAGCGCTGATATtttgcacagacacccttgagaa taaagtctattggcttccaatagtttccagttccaaagataaccactctc ccccacaggagcccaacttgtcattttggccgaaatgaggtttaacggtt accaatttttagagggagcacgctgcgacggagagcgctgaaattttgca cagacacccttgagaataaactctattggcttccaatagtttccagttcc aaagataaccgctctcccccacaggagcccaacttgacatttcggccgaa atgaggtttaacggttacaaatttttagagggagcacgctgcgtcgaaga gcgctgaaattttgcacacacacccttgagaataaactctattggcttcc aatagtttccagttccaaagataaccactctcccccacaggagcccaact tNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcgctgcgacggagagcgc tgaaattttgcacacacacccttgagaataaactctattggcttccaata gtttccagttccaaaagtagtcacaaaaacttgaaaacgcaaatttgaga atatcaaacgaatatcaaacgaatatcaaacgtcaaacgtagaatatcaa accaacttcaacttaatatgacctgtctggtcatttaAATACAACTACAC AGCTccactcgcagctctactctaccatttttgttttgattaaattttgt attttaatgactagccaggtctttcatttgagggctatgcatgttagcct ccactgatgcaagttacccaatctcacggtattacagctcaataaatcaa tgaaataatttgaaataaaaagtattaCAAAcgttgaacctttcatgaat ccaaataaataaaagtatttatctaaagtgaagattgcatttcaaaataa aacgatatCCAAACCAACTTAAAGACAGTGTCtgcctagcctggatatcc aggctgtaaactatttcacagtctagtctttgatattttatgttctggtt tacagcctggtctccctagagcgatttgcattctccatatgagaatgcag tctGCTTGCTTGTGCTCATTTCGCTGAAGCCGTAAGGACCAATCTACACG GTGcggagcaattctgaagcaaaaataggatagtcctccacttgctagtg aagagagcgctttctgttacatgaaaacatgaaaaagaagaaaacagagg caagttcattttccaagaaaacatggtctgatgtttggtcatgataatgc atgcaaacttgttcatgggctccggtgtaatctttggatgttttaaatgg ttttagataTTGTAAGGCTGCTTTTATTAAGTTCTGTTTTgatgccctgg gttggctaggaaagttttggaaacatgggtttgcactttcattctctagg gagaccaagctttataattttagaactttgtatgttgaggtaaattttgt tttttctaaaattttgagcttggatatccaggctagtgtctgccaactaa aaatttctctgcggggtcactgcactggcaaggagttacgacttcagact ttagattccaattcttgtgtaggctgcaactacactgccaaatgatctgt attacaaatacttccaaataggtccataagttaagaaaatgaaattatca tctagcacgggggttttgtttttaaaaacaaacttcaaaataaaattgtt aatgaacttgttacttaaaatatcacNNNNNNNNNNNNNNNNNNNNNNNa tcacttacttacataatttatttatgatataacacccctttcttaaataa atggcttcttaaagtcttttatgtttgccgcaagaagggagaaaaattta atttaatttgatAAAGCGCTCccacagcattaatctttgatacgcaatGC AGCAGGGTGCAAGTGTGACTAATTTTTAGATTAGGCTAGAGTTATCTCCT TTCTCTGTCCTAtttcaacaatacaatgctTACATAGTTGACACATAATA CACATTGACAGAAGTATTCTCCATGCAATGTTTAGGCTGACCctcaaaat atttccttttccGGTCCACCAGGTGACAACAAAAAAACACGTGGTTGGCC GCAAAAAAGATTATCTTGCTAAATTTTGATCTCAAAACTCAAATTTTGGA AGTACTCAAGGAAGCACTCGGGGGGGGGGACTCAGAGTTTCttaaagtta caaagaaagcgagttgataaaatgAGGTTTAGAGACGTTTATTAAAGTGA CGAAAAAAGCGAGTGAATAAACTGAGGTTTAAAGACGTTTGTTGGGCGTT AGTAGTCTTCAAGAGGCAGGGGTGTTAAAGTCTTGTCCCCCACGCAAGGG AAAGCACGAGTTCttccaaaattaattctttgGTAATCAAACGCTAGAGA AGAAAACTAACTGTAGTCATTTTTCTATGACGTAAACAAAGATCTCTACT AAATTCAACACGaaccaaacaataaaaaaaatccaatgtCTAAACAAAAG TTCAATGTGACAAAGCTCATCGAGACCACTTTATTTGTTTCGATTATTAA TTCTAAGGATTGaattttttctaatctttaGTTATCAAACAAAAGCGGGA ATCTGATGTGagcgttattttttcaaagaatccttTACCTCCATTTGATT GGATACTTCTTTTTAAACAATCGCACAGCAATTTTTtgattggaaaaaaa tgaaacaattgaTATCGCAGTGATTGTATGGTAAAATATTTGGCCCTTTC ACGAGTGTTTGCAATTTAACAAGATAAATCAATGTGACTGAACGTCTGTA AACCTGATAAAGACCTCCACTAAGAAGTTCGAAATATTGTTTGAAATAAG ATTTATATGAAGAATGACTATTTGAACTTACATAAATGAAGAACAATGTA AATATGGGTGATTTCTTAGTTTTTCTTCTATGTCTTCATGTACACCAATC CGGGGAGTCTCCATATATATACCATAGGAAAGTTCATGAAACCTGCTAAC TTTATTTTGAGTTTAGCAAATCCCCAAGATTGGCAAACAATCATTTTCGG CTTTTCACTTTGATCCTTTATCTGTTTCTTTTTGGGTCATGTTTGGGGCA TAATAGCAAAACATTGGTGTTCGGGCTAAGTTAAGGCAACAAAACTTTAG ATTTTGCCTCTGAAAACCTGGCCTGAACATGCGCAGGGCAAGTTTGGGTC ATGTTAGGGCCAAGTTGGCACCTCTACTTTCATAAGCTAAATCTTGGTAC CATTTTCAATTTCCCAACTTTCTCTTGGAAAAAATCACAATATGTGACTC CAAAGGCAGTTTTAAGTaattagaaaatagaaaattctataataaaatca gcatttttaagtaaaaactcttaaccctattcaaactaggcttttagggg cggttcagaactagggggggcttttcctgtaccaccccttaacttttgat ctagtgggtctttttggatgaaatttggcacacaagatccttgtgacgta aggtaacttttgacaaaaaaaattttttgatgacgtcactcatcatgccc aaagtgagcaaaaaccgaaaatttcctttgttcttataaatagctattgt attctaacaaaggctttagaaaaaagttgcctgagtttaaaatgcttatt ttatcctaaatattcaaaaaattacggtctaaacgatatatttgacaatg aaaataaatttgtattgtaaaagtgtcaatttttgtgacaccttactgtc agaaatgtcatcatgctcaaggtgtgaaaatatttaggtgacaaattttt ttttattttgaagctaaataaaagttaagaatttacagaaaatttcacgg caaaagctctattatttcaggagctattagaaatagtttgacctccgaac agaaagagccccccccccctagtacgaatagggttaatatCCCAAGTAAT TTTTGATTTACAAGTGCCAGAAATCTTCCCACCTGTCAAATAAAATCCCC TCCTAATTTTACAGATTCtaccatctgccaaattaataCCCgccaaaaat tgcattttggccaaccgccaaattaagtacACATCGAAGTTGATACACTT CGGCAACAAATACCTGGTTTTCTGAAAGTCCCATGctatatttatttatt catgctttctttatttctttctgtttctatttcaaaaattgtctaGTCAG AACAGTCTATAAGATTCTGAGTGTTTTTCTTGGAACGTTTTAAAGAGGTT CAATGTTTCTGGTTGAAATCTGAAGATCATCTCGACTCTCAAAAACAATA TCAAATCTGATCAGATATCAACTGTTAGATTATTAGATATTAACTGTCAA TAAATCTTTAAAGGAAAACAGACTAAAAGCGGCCTGCAAAAAACAGGAAC CTTTAGCTTTGCCAACTTTAAAGGCCCTAAGGCAATAAACAACTTACTGA AGTGGATTCTTATCAGGTTTTAATATTGCCCAACAGCAGTTGGTTTTAAT ATTGCCCAAATCCATCACCCACCCCCACCTCTAAGAGGTAACGAAATATT TGGGCTGGAAGTTGCTAAGAATTTTAGCTGTTTCAATCATGTCAGGAATC TGGGCTGTGTGAAGGTTATTTTTGAAGGGTTGTTTTAGAATTCCTTTTAA TTGTCAGGTTACTAGATAAACAGTGTTCTACTTGAAATAATATAGAAAAT ATGGTGTTATTTTATGAAAGGGAATTTGAGAAAGGGGAATTCCCCTTCTA CAtgattttccaggaaaaattcaatttgGTCACATGAATTTCACTGTCAA CAAATTTTTTGATATcttcatatttttaaacaatattcAATACAGATGCA AACCTTTTGAGATGATTTGATGACAACTTGTTTTCACCTTTTCTATTTCT TCAGTGTTCAATCAATATATATCTTGTTTTTATATACAGAGCAACCTAAC AGAAGAATGGGCAAGGGAGAGAAGAAACGCCCACTAAAAATTGTCATGCC TCCTGTTCACCAAACGCAACCTCAACCAGTGTAAGacaatttcaccattt tattttatcattctCTAATTTAGCTCAATGGAGCATTTTTTTGCATATCG ATTCTGCTTCATCATTAACATTTTGTTTAACAAGCAACTATATTTTGCAA TTAatgtatttttgtgaaaaaaaagctaaaaaacttGTTTAGTAGGAACA TCTCTAttgtttttagaaatgctccaAGGAATTTATCAGATAGAACCACA TTAACTGTGAACAGCCAGGTAAGTAGTACGGCTTAATGAATAATATTTGA CTCATTGACACAATGTGTGACCAATCAAGTTTAAAGACAGTAATGGGATA CTTACTTGAAATCCCGCAGACTTTCATAGTGGTATAAGGGTatcaaccat tgagtttaaaggcaaatgggctagagaggaatcttcagcCTTTCTCCCCT TAAtttttgttctgtttttatgGGATGCCTGATGAGACTTTGCCCTTTTT TGTTCTTGCATAATCCATTTTTCGAAACCAGCTAAGAGTTTCTCTAACCc cgcttcaaactcaatggtatcaaccaggccatattttagaaaggcaaggc agcgtccgttggtggccaaaaagggcactttttcttatgtttttccacta aaaaggctgtttttaccaatattttagtaatttcaagagGGGCAGTGTCC GATAACCGGACgcttaaagggcatgaaaaatggcctgtcAACCCCCTCAC AGATATGACATCTCCTAGATTTTTTACTCCACTCCTTCCCCTATAGGAAT GTGTTAGTGCTTTGATAGTTTGATGTTGTACCTATCATAAAATGTCTATT GAATTTTCGCTCTTTTTCTTTCAGGATTACCCGTGCAGTACTGATGATTT GATAGAAATATGCGAGCTTGGTCGTGGGGCCTATGGGGTTGTAGAAAAAA TGAGACATAAACAAACTAACATAGAAATGGCTGTGAAGGTTTGTTCATTC TCAAAATCCCAGATCTTGATTGAAAATCTTCATCTCTCTTCTTGTTTTTT TAGATTGAACTAATTTTTGACTTTACTAAAAAGCATTGTTGCTACCTTTC AATTTACTTTAGCCCATTAGACCTTCATATGCAATGTCTAACTAAGTACT TCAtgaaaatttacaataaaagtGACAAGTTATAGATTTAACTTTTACTT ACACACATATTTTTAGGACTTCAATTCAAATTCTAGACTGTTATATTTGG TAACTTTGCTTATTTTATAGCGTATTAGGCACACGGTCAACACGACAGAG CAAGGTCGTCTATTAATGGATTTAGATGTTTCAATGAGACTTAGTAATTA CCCCTATGCCATCCAGTTTTATGGTGCACTCTTCAAAGAGGTAAGTCTGA TCTATTTTTTCAGGATATTCCTAAACAGAATAAATTTTCAcggttaattt tttttgatggacAGCATAGCTATTATATATCTTTAGGTTAAATATGTACG AACAAGGTGCTCATgttaatcttttgttttttttctaggGAGATGTTTGG ATATGCATGGAACTCATGAAAACATCATTCgataaattttataaaaaagt tgcAGAGCAAGAAGGGGCTTTGATACCTGAAAAAGTACTGGGAAAAATAT CCTTCGCTGTAAGtgttctttgtttttttgattCGTGTTTTTAAAATTCC AGTCCTTCTTTCATAGCAGATCCATCCTGCGCAAACCACGCTCTGCTGTA AAGTGATGGCGTGAATGTGacgatctgacctggttgttcagcTAAAACAA TCAAAACCGCACCACCTCttgcgaaagtgaaagtgcatGGCCATTCAAAT TTGTTCAAGTCAAATGCAAGGAACATGCATATCCCTTCAAATTACACAAA TAAATAAAGTCACAGTCAATTTAAGGTCGATTCTTGACTATTTTTAATAC AGGTGTTTCTTAAAAACGAAATTCTTATATgaatactttttgctttttca gGTTGTTTCTGCATTGGAATATTTACATAGTAAAATGAAAGTAATCCACA GAGGTGAGATAATTATTCGGTTATAAGTTGTTCCCAAAGACAATGAAAAT TTGGGTAAAGTTCTTCGAAAAATTCTCAATCCCTTATAATTAATTACGAA TTCATCAGAGTAAGCATTCACCCACGACTTATAACTTGTTATCGAAGCTT ATAAATATAGCTGAATCTATAGATTTTATCATTCCCTGAGGATGGAANAA AGCTTAGAAATATACCTGAATCTATAGATTTCATCATTCCCTGAGGATGG AAATcttgaatgttttttatttacgaTGAAATCTTTCTTAGATGTCAAAC CGTCCAATATATTAGTTAATGATAACGGAGAGATCAAATTATGTGACTTT GGAATCAGCGGACAACTGGTTGACTCTCTGGCAAAAACCCTTACAGCTGG CTGTAAGCCCTATATGGCTGTATGTTATAAAATACTTATACTTTACTGAT AACTCCTGTTATTCTACTGTCTCTCTCTTTTCATCTAACACAAGTTCTAT ACGTTCTTAAATGACCTTCTGATTGCTGTTAAGCTTTCTCATTCCCAGGG GAAACATTTCAGGTGCATTTCCAGGATCTTTCTAATGTTTTTCCTGGGTA TACtggaaaaataattcttttgcTGCTTGCAAATACGTAACAAACAATGG CCTTGTGACTGACCACCTAATAAGTTGAAGCTACTTTCCTACCTACCCAG AGCGTTGGTTTTTTACGTTGTTAAAGTGGCGATAGGAAAGCTTTGCCGTG AATGAGAAAGATTAAGCCATTCTATGTTATATTTGACGGTTGAGTCTGTC AGGTTCACGAACTAAATAAATCAAATccgataaaaaaaaattcttctttg gAAGTGTTTACACCGCAACATTACCCTAACTTTCGAAAGTCTGTTCCGAC TTAGAAATCAACTTCCAAAGCAAAACCAATAAGTAGTGAACAAGAATTTC GTCACCGGTAAAGTAGCAAACTTCCCTTAGGTAGGGCGATTCTCTGAGGT TTCCACTGCGTTAAGGTAAAATTAACTTTAAAAGTATTTAAATCGAGCTA CATTTTACATTTCAGCCTGAACGTATCAACCCAACGAAGGGACAACATGG TTATGATATACGTTCTGATGTGTGGAGCTTAGGAATCACCATGGTTCGTT TGAATGATTTTTCCACTCATATTCTCaatttcagttgagctagaatctga gaatgtatGTCAGTCAGTCTGTATGTCAGTCACctcaaaactttagggca ggctggagacttcaaaaatggtccgattcggctgaaattttgtacacttg ctccttgggtgaatacctgggggtgtttttttcatttttttttcattttt tttccaaattctgATTCtaacaatctttttttttttattccatttttttt attgttacaattgggcctacgagtAATTAAGAAGATACCGAAGTTGATct agtgcggttagcacgttcgacagttttGTCACTGTTGCTACACGTTTTGG ATGAAATTAATACAATGAACTCTagctttaactcgaacctctataactgg aATGTCTTCTTATTTCGAACAAGTTTAATGGTCCttttagttaacaatgc cttataagccttactccataactcgatatttccttaactcgaacagatTT ATGTTCCCTGCgcgtgttcgaattatggaatcTCCACTGTATAAATTTCA GTTTTCTGATTTGTTTACATACAGGAGTCGTCAATTTTCATCGCTAATTT TTAATACGAaatttactttaatgggataaactttcgcggggatgggtcta tccgcgaaattcaaaaacttcGCCGGGACTTGATTTCGCGGATGAGGAGT TCCCTGAGTTTTCGTATAATTTCGCTGACCaggattaaattaaatttttc taaagtgattgcaaattttgcaaaatcggGGTAGCAAACAGAACttctct caaaattttgatattgtagtatgtgaaaattcgaaaaataatgAAGAGAC TTTCTTCCAAGCAGCAGGGTTTGAGTAGTCTGATTTGCGGGACGAAAAAC CGACgatagaaatttgaaattttcgcgaatcgaagaaagatttcaatcat ttcgcgggtacttaatttcgcggatgaggcccttccaaattttcattggg acttaatttcgcggatttttgcggatgacacccaaatccgccagaaatct gcgaaatttaatccccgcgaaagtttatcccattaaaagtAGGTGACATG ACTTGTGCCGTACTCCTAGATTTCAACATTACTAACAGAACTTTTGGACG CGtgtattttaaaaacaatttttcttcACCTTTCatttctaaataaataa aataaataaataagtcaGACCTGAAGTCTGTTTCCGCCATCAAATTTGAA GATTGCAttgtatttttttatcattgagTTGATAAGCAGGTCGGAATATT GTTTATTTCAACTCGTATAAGAATGACCATGGAAATGTATACTTACTCCA TTCACTTTTagtgtattcatgatatgcaccattgcaatgtcttctgacat tacatcatggaccaaatagctgattggttgtaagtgacgtaagatcagtc aatacgtcactttcagccaatcagctgttgggtatGTGGAAGACATGGTA TTCTATTAGTGAGATTTCCACATGGTAGCAAAAAAGAGTGCACGCTTAAA GCGAATgtatttattgtttattttaacTCGCATAAGAATGACCATGGAAA TATATACTATAGTCCGTTCGTTTAAATGCGTACTCTTTGCTACGGTGTAG AAACCATGTCAGCGTGATTCAGACTAATTCCCTTGGGACTGGTTTCCACT TGGTagcaaaaaagagtgcacacttcaAGCGAATGTATTTTAAATTATAT TTCAATCCAGGTCGAACTGGCATGTTTGAAATTCCCCTACAGCAGGTGGA CAACACCTTTCGATCAATTAAAAGCAGTGGTAGAGGAGCCTTCGCCTACG ATACCATCCGAACATAATTATTCTGATGAACTTCATCAATTTATTTCACT TTGGTAAGAACTTTCTCTTTTGCTTGGCTAGTTAGGTTGTTCCATTTAGT ATCCATCCAGGGCAGtgaaaatattccaagtcaaaaataattcttgaaaa tattgGANTTATCTTTCCAGGTCGAACTGGCATGTTTGAAATTCCCATAC AGCAGGTGGACAACACCCTTCGATCAATTAAAAGCAGTGGTAGAGGAGCC TTCGCCTACGATACCACCCGAACATAATTATTCTGATGAACTTCATCAAT TTATTTCACTTTGGTAAGAACTTTCTCTTTTGCTTGGCTAGTTAGGTTGT TCCATTTAGTATCCATACAGGGAAgtgacgaaccttttcaagccagaaat aattcatgaaaataTTGGATACCCCTCGGAGAAATGGTAGAATTGCAAAA AATGCCCATGGAAATTGAGTCTTTCCCCTGAAAAGTTCTGGAATAAATTC GACGAGATTTCAAAGAAGggaagtatttaaagaggtttctACAAGGTACA GGAAACTTTTTTAGGACTCAAAAACTGACTTCAATTGATATAAGCGGTTT TGGGTTTTATTTTTTGGGGTAAGGGGTTTTTCCTGTGACGACGTTTTTTG ATCCTAAAAAAGCCTTAGCAAATACCCCAATCGCGAAAAATTCTCTAAAT ACTTCATTCTTTAAAATGGGCCAGGTTTGGTTGCGTCGAATAAAATATGT CAAGGTCCGAAGGGTTTGTCCCCCTACTTATACTGGTACCTGTCAGCACA GCTTACTATATCTAGCTATATGTACCTACCATTATGTTATAGCCGAAGGC TAGAGCCGAATCCCCTATATTTAGGCTTATTTCCTAATAAAGTTGCGTGG GGTTGCGTGTCCCGCGTGGTTTTCAaacaaacgctggattgaaaTTTACC CCCAGAAttcgaaaaatgtaaaaaggAGCTAACAAAAAAATGGCTCGATT AAATCAACCATCCGAAAAACGTCgtacattttaaggcttcactttttcta gcttgggaaaggttaaagattcctcTTTAACATATTTGGCTTGATACTCA ATTGTACTAACTTTGTCAAGAGAGTCTTTGTTTGAAAGATCGGGAAAAGC TTTTATTCATGATATATGcaacattgcaatgtcttccacggactcaatag ctgattggttgaaatgaCGTATTGACCAATCagttgttgggtccgtgatg taatgtcagaagacatcgcaatggtgcatatcacgaaTACTTGTATAATC TTGCTCACATTTGCTATTTCGGAAGTATCATCGCAGTGTGATAGCTACTC CTATCTAATTATTGAATGGTGAATTATGTCAAACCTTCTTCCTTGCAATA GAAAATTCTACATAACATGGTTTGAGAGcagatcattttatttttgcaaa aagatatAGCTCTCGTTTTGCATAATACACGATCTCGCTGTTAGTGATTC GCACATGAATACTTCCCCCCCTGTTTGATATTCTCAGTATAGGTCAACGA GAAAAGGCTTTGAAAGGATAAACAGTTAAATATTTAAAAGGCACTTGCtg ttttttaacgttttttgtgttttaataCTGGAGAGAGCTGAACTGTGTTA TTCGTTTCTTTAAATATTGGAAAGCTCTATCTACACTGTCAgtgtttttg aaatataatagttTTAGTTTTGAGGGCGATCTATTCGGGTAGAGAGTTTT TTGAATGtctcttttttaaataaaaacttgtcGTCTAATCAATTGATTGT ATCGATATTTTGTATGAATTTCTGACTTTTCCtattttcagtttgaagaa GAACTTCCTGGAAAGACCAAAATATGACACTCTATTGGTACGTTAAGCGA AACAATCTGTGACTAAATATTGTGGCAAGAactcccccccccctagtaTA AATGTTGATGGGTGGAAAGGCTGCCACCAGAAAAAGCTCAAATCAACCCT GATTTTAGGGGgggattttttaagaaattgcaacatattttgtcactgat tgtagttgATTAGTTATATATATCCGGCCTGGACTTAACcctattaaaaa aattgaaaatcgcaATTAAGATAAAATTTTCATGTTTATTCTTGCCGTCT GCTGATTTTTTACTGGAATGTCATTACTGTCATTTTAGACATTTATATCT ATTTGCAGCCATCATAGTTTCGACTTTTAGACTAgaaatagctttcaaat tcaCGTTTCTTTACACGATATTACCTCGCTTATCTCCAAGCATCAAACAA CAGTCAGAGTTATATACTTATCgtattttgttccttttttttcAGACGGA CTCATTCATCCTGACTCACGAGAAAACACCGGTTAACGAAATCGCAGGCT TCGTTCAACCCATCCTGGACCAAGTATGAATGACTAAACGTCACATGTCA ATCAAATGACGTcatatgacgtaatcttttcgaAAATGGGAGTGTCTTTA CAATTcaagtttttttggcaaattgtGCTGGCTATGACACTGCTTGGCTT AAATGACGTCACTTTCTATAAGAAATCGAACCACAGAAATTCATCGAATG AATATACCTACCAGCCCTCGTGTCGTATAGAACTCTATAAAAGCGGACCG GACTTCAAGTTTACTGGGACCGAATGACACCAATCAGTCTCAAGTCAATA TTATGACTCTCACAGCTTTtagaaatatttgacgtcattcGATCTCGATA AACTCGGGTCCAACCCCCTTGAGTTGATTGGTTTTATTCAAAGCCTAAAA GGCCTGAGCTTTAAAGACATTTGTTACATTGTTAGTTCGATGTAAATCGA atattttttatagttttttgtGGAGAAAGCGAAATGAATTATGGGAATGT TGCATTGCATTGCTTGGCAATGTTAGTGCTTAGTTTTCATCTTTCGTCAA ATCAGCTTTTTCTTGTTAAACGTtgtttagctctagtttagacggcccat cttttgccctgcctattctgattgtgaattaaagtgggctgtctaaagtc aaagCAATGTCCTCTTTTGACGCTAATGCAATATTGTCttctttcaaact tttccagcttttccaagcaaagattttaactaccAAGTTTGTGCCCTCTT TCTATCTACTCTAACAATTAAAATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041298XLOC_041298Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065912-exon-scaffold_448-1491911889:528596..528855TCONS_00065912-exon-scaffold_448-1491911889:528596..528855Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1510915933:528596..528855TCONS_00065912-exon-scaffold_448-1510915933:528596..528855Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1575043694:528596..528855TCONS_00065912-exon-scaffold_448-1575043694:528596..528855Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1491911889:536285..536375TCONS_00065912-exon-scaffold_448-1491911889:536285..536375Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1510915933:536285..536375TCONS_00065912-exon-scaffold_448-1510915933:536285..536375Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1575043694:536285..536375TCONS_00065912-exon-scaffold_448-1575043694:536285..536375Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1491911889:536562..536613TCONS_00065912-exon-scaffold_448-1491911889:536562..536613Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1510915933:536562..536613TCONS_00065912-exon-scaffold_448-1510915933:536562..536613Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1575043694:536562..536613TCONS_00065912-exon-scaffold_448-1575043694:536562..536613Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1491911889:537220..537333TCONS_00065912-exon-scaffold_448-1491911889:537220..537333Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1510915933:537220..537333TCONS_00065912-exon-scaffold_448-1510915933:537220..537333Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1575043694:537220..537333TCONS_00065912-exon-scaffold_448-1575043694:537220..537333Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1491911889:537616..537735TCONS_00065912-exon-scaffold_448-1491911889:537616..537735Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1510915933:537616..537735TCONS_00065912-exon-scaffold_448-1510915933:537616..537735Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1575043694:537616..537735TCONS_00065912-exon-scaffold_448-1575043694:537616..537735Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1491911889:537884..538003TCONS_00065912-exon-scaffold_448-1491911889:537884..538003Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1510915933:537884..538003TCONS_00065912-exon-scaffold_448-1510915933:537884..538003Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1575043694:537884..538003TCONS_00065912-exon-scaffold_448-1575043694:537884..538003Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1491911889:538347..538398TCONS_00065912-exon-scaffold_448-1491911889:538347..538398Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1510915933:538347..538398TCONS_00065912-exon-scaffold_448-1510915933:538347..538398Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1575043694:538347..538398TCONS_00065912-exon-scaffold_448-1575043694:538347..538398Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1491911889:538687..538814TCONS_00065912-exon-scaffold_448-1491911889:538687..538814Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1510915933:538687..538814TCONS_00065912-exon-scaffold_448-1510915933:538687..538814Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1575043694:538687..538814TCONS_00065912-exon-scaffold_448-1575043694:538687..538814Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1491911889:539461..539538TCONS_00065912-exon-scaffold_448-1491911889:539461..539538Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1510915933:539461..539538TCONS_00065912-exon-scaffold_448-1510915933:539461..539538Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1575043694:539461..539538TCONS_00065912-exon-scaffold_448-1575043694:539461..539538Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1491911889:541306..541408TCONS_00065912-exon-scaffold_448-1491911889:541306..541408Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1510915933:541306..541408TCONS_00065912-exon-scaffold_448-1510915933:541306..541408Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1575043694:541306..541408TCONS_00065912-exon-scaffold_448-1575043694:541306..541408Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1491911889:541669..541708TCONS_00065912-exon-scaffold_448-1491911889:541669..541708Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1510915933:541669..541708TCONS_00065912-exon-scaffold_448-1510915933:541669..541708Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1575043694:541669..541708TCONS_00065912-exon-scaffold_448-1575043694:541669..541708Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1491911889:543237..543282TCONS_00065912-exon-scaffold_448-1491911889:543237..543282Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1510915933:543237..543282TCONS_00065912-exon-scaffold_448-1510915933:543237..543282Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1575043694:543237..543282TCONS_00065912-exon-scaffold_448-1575043694:543237..543282Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1491911889:543741..544571TCONS_00065912-exon-scaffold_448-1491911889:543741..544571Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1510915933:543741..544571TCONS_00065912-exon-scaffold_448-1510915933:543741..544571Clytia hemisphaericaexon
TCONS_00065912-exon-scaffold_448-1575043694:543741..544571TCONS_00065912-exon-scaffold_448-1575043694:543741..544571Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_448supercontigscaffold_448:528596..544571 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

min expression (8.61979 tpm) - - (55.2124 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.28209 8.61979 15.2811 19.8887 30.5082 29.408 41.0327 55.2124 34.4383 37.6026 21.9275 19.2312 20.3063 24.8516 15.0778 15.1798 13.4623 17.1228 8.85399 12.9967 14.6953 15.3981 12.6411 14.5774 27.9728 21.0152 9.44705 12.2423 15.2782 11.7982
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00065912 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
ZOOM
x 1
POSITION
0
200400600800100012001400160018002000Expect = 2.46e-130 / Id = 58.86SequenceMP2K6
Match NameE-valueIdentityDescription
MP2K62.457e-13058.86Dual specificity mitogen-activated protein kinase ... [more]
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