TCONS_00065959 (transcript) - C. hemisphaerica

Overview
NameTCONS_00065959
Unique NameTCONS_00065959
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2200

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00065959 ID=TCONS_00065959|Name=TCONS_00065959|organism=Clytia hemisphaerica|type=transcript|length=2200bp
TATTGGTCCAATTGAGAAGTTAGAATTACAAGTTAATTACCAAACAGGAG
AGAATCATGAGTCTCGAAGAACAGATACGCGAGTTTATACTTTGGCTAAG
AAGGATGGAAACTggcaatgttttgatttaaaacAGATGTTTGAAGCTGA
CGCATATCTGAGAGATACGAAAAAAATGAATTGGCAAGGTGATGTCACTA
TAAgGTATTTGAAGTTCAGGAAATATGCAGGCGCTACTGATCCCATTTAT
TTGGACGAGTTTTGGATCACGTCAGAACCTCCTATACCTATGAAGAAAAC
TCCAGCCCCTGGCAAGTATTGGATTCACaagtatgacgtcatcaaagacG
ACACGtcaatcaaagttgacatttatCCATCAGAATGCGGTCTCGATGTC
CCAAGAATTAGAATTGATAACTGGAATAGTAATTTTGATGGAGAAAGCAA
GGCACACTGTGATAAAAATGTTACATGCTCTGAGGCAATCGAGACACGAA
ATTGCACCATGAATGTAACATGCCTTGATAAGTCAACCTGTGAAACAGAA
ACTCGATTAACTTGCTACAATATAACAAAAACACATAATTGTACTGCACA
AAATTTAATTTGCCTTAACCAGACAGTCGAAAGCCGAAACTGTACAGGCC
AAAACACGACCTGCTTTAACCAAACAGTTTCTAAACAAAACTGTACAGTT
CAAAACATGACTTGTCTCGATCAATCAGTTACCCAACAGTGCGTGTACGA
GAATATTACAACCTGTTCTAAAATGAGCGAGGCAAAGAATTGCTCCAATC
TAAACCATACTTGCTTCTACAACGTAACTATAACAACCTGCCGAAACGAG
ACCGATCCAAATTGTCCAGAGTTGATGGAGCCAAATACAGTGATATATTC
TGATGGCCAActtggttcgattgatattcaacAGCAACAATATCCGAGCC
CTCCGGTCACCGgcacttttgttttgaaatacacTGGCGAAAACGGGGAA
GAACATTTCAGTCGAAGGATTAAGCCGGATGTAAGCGAGGAAGAAATGAG
AGAACATGTCGAACTTGCTTTCCATCATATTACCGGACACGTCAAAGTTG
TCCGGAAAGGTACATGCTCGGGCTACAGTTGGGACATCACTTTCTACACC
GTCGGTGGAAACAAACAGCAGTTAGAGATCATCAATAGTACGTTAGCAGG
GTTGGAAATGGAAAAAGGTGTCAAGAccattcaagatggcggcatGTTAT
TCGGGCCGTTGACTGGAGAGTTTTTACAAACAGCTGAAACAAAACCTCAG
GTTGTTGTTTCCATCAATGATATTGTGAGTGTATGCAAGGGTGATTGTTC
TTTCGAATATTCTGACGCCCTTACGCCCACTATCAGCTCAATCACGCCCA
AGACTGGAAAGGGTGGTGAAGCAAGTCAAGAAGTTACCATTTCGTGTACT
GGTTGTTTAGCCGGTGCCGATAAGAATGACGTCACAATTGGTGGTGTGAA
ATGCATGATTACTACGGCTACCGAAACTGAAATCAAGTGCCGTCCAGGTA
CATCGCCCGCAGGAAATAAACCAGTAGTGGTCAATGTCCATGGAAAAGGG
AAAGCCAAAACATCGAATGGAGAACCCATCCTtttcaaCTACGAATTAGA
AGTCAGTTCTATGGAGCCTAAAAGCGGTGCCGCGGCCGGTGCACAAATTA
CCGTAAAAGGCAATtttgataaagaagaaaacatcacggcaactttcaca
aaagtgacgtcatcaacGTCACGCAAACGTCGGAACGCCGATGACGTTTA
TGTATTAGCAGTTAGACGTGTCGACGAAGGGCAGTTGATGGTAACAACGA
ACTCGATGCCAGATGCGGAATATCAGTTGACCATCACTAATGGTGACCAt
acatacacaaccaccgagaAATTCACAGCTGATTCAAGTCAAAATGTTGC
CATCACATCCATAACCCCTGACACTGGCCTCCCTGTTTACGGCGGCGTCG
ATATTGTAATCAAAGGGTCCAATCTAAAAGATGACATGAAGGAAACTGAA
GTTCATATTATTGATCCTTTTGGTCCGAGGTGTGAGATTCAATATTTAAC
TCAAGATGAGATTCGATGCACATTGCCACACATTACCATCATTGGCGAGG
TCACTGTGCTTGTCCATGTAAAAGATAAAGGTACTTCTTTGAGTTCAATC
Run BLAST on NCBI

transcript from alignment at scaffold_448:415843..423076-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00065959 ID=TCONS_00065959|Name=TCONS_00065959|organism=Clytia hemisphaerica|type=transcript|length=7234bp|location=Sequence derived from alignment at scaffold_448:415843..423076- (Clytia hemisphaerica)
TATTGGTCCAATTGAGAAGTTAGAATTACAAGTTAATTACCAAACAGGAG AGAATCATGAGTCTCGAAGAACAGATACGCGAGTTTATACTTTGGCTAAG AAGGATGGAAACTGGCAATGTTTTGATTTAAAACAGATGTTTGAAGCTGA CGCATATCTGAGAGATACGAAAAAAATGAATTGGCAAGGTGATGTCACTA TAAGGTATAAATATTTTATTTTGCGGATTGAATTTTTTTTCTTAGCCTTT AAAATTCGGCATAAAAATTCGAAACATATAATTAGAACCCTTGAAGCATA ATAGTGCGACATTTGGATTTTCAGTTTTTCTTAGACCGATAGTAAAGCAA GTTTGGTTATTTTTCTCAAAATGACGATCTTTGATTTGTAAAAAAGTTCT TCTAGTCTACTTAAATGGACCCAGAGAAAGCAAAATTCGATTTACGGCCT TTCTTTAAATATGATTCATATGAAATTCTACAAATGTTACTTGTTTTCCT TCAGGTATTTGAAGTTCAGGAAATATGCAGGCGCTACTGATCCCATTTAT TTGGACGAGTTTTGGATCACGTCAGAACCTCCTATACGTAAGTGGAATTG TTGTGCCAGATTGTTAGTTAGAATCATTTCACCAAAATTTTTGTTGACAA TTTGCTGACAATGGTTTTCGTTTTCTTAAAAACATCAGTAACGCTATGAT CCTATACATACTTGTAGTTCCTCTCTGACCAAAATACGGCTCGTTCCAAA TATTTCTTATAGTTTCAACAGAAGTACACTTAATTTACACTGTTTTTTAT ATTGATTCTCAAAAAATGAAATTCTCATGGCAAACTTTGAGAAGTTACTT GGTAATCTTTAAGACTTCCTATTCTTCCAGAACTTTTAGATGTATTTACT CTGAGAATCATTTGTATTGTCATTCTTTTAGCTATGAAGAAAACTCCAGC CCCTGGCAAGTATTGGATTCACAAGTATGACGTCATCAAAGACGACACGT CAATCAAAGTTGACATTTATCCATCAGAATGCGGTCTCGATGTCCCAAGA ATTAGAATTGATAACTGGAATAGTAATTTTGATGGAGAAAGCAAGGCACA CTGTGATAAAAATGTTACATGCTCTGAGGCAATCGAGACACGAAATTGCA CCATGAATGTAACATGCCTTGATAAGTCAACCTGTGAAACAGAAACTCGA TTAACTTGCTACAATATAACAAAAACACATAATTGTACTGCACAAAATTT AATTTGCCTTAACCAGACAGTCGAAAGCCGAAACTGTACAGGCCAAAACA CGACCTGCTTTAACCAAACAGTTTCTAAACAAAACTGTACAGTTCAAAAC ATGACTTGTCTCGATCAATCAGTTACCCAACAGTGCGTGTACGAGAATAT TACAACCTGTTCTAAAATGAGCGAGGCAAAGAATTGCTCCAATCTAAACC ATACTTGCTTCTACAACGTAACTATAACAACCTGCCGAAACGAGACCGAT CCAAATTGTCCAGAGTTGATGGAGCCAAATACAGTGATATATTCTGATGG CCAACTTGGTTCGATTGATATTCAACAGCAACAATATCCGAGCCCTCCGG TCACCGGCACTTTTGTTTTGAAATACACTGGCGAAAACGGGGAAGAACAT TTCAGTCGAAGTAAGGAAAATTTTCATTATCTTTTTATTTGCAACTCGGA ACAGTTTTGAGAAAAGATTTCCCTAATTCTTTTTGAAAAAATGAAAAATT TGAGAAAAACGTGAGTTGTGAAAACCCATGTAAGATTTCAAACCCAGTAG CGTAGACAAGAGGGGCGCAAAATTTGAGTAGGAAAGCAGATTTTTATGAC ACTCTAATTATCTTTTTACATTATGAATGGATAATTACAGTGTCATCAAA ATCTGCTCTTCCTACACAAATTTTGTGCCCCTCCTGTCTACGCTACTGCA AACCTACTCCACTTTGGATAAAAGATCTCAATATTTATCGATCAATGAAA AAGGAATATCAGAAAAATCATGACAAATATAACACCAAAATATGTACACA TTTCACAGAAATCTGTAAAGCATCTTTTATTATTATCATAAATTTTACTT TAAGAACTTTCAAAATGGTTTCAAAATAATGATTGGTTGTGTTTTTTTTA CTCAAGGGATTAAGCCGGATGTAAGCGAGGAAGAAATGAGAGAACATGTC GAACTTGCTTTCCATCATATTACCGGACACGTCAAAGTTGTCCGGAAAGG TATATTCGTTATATACAGTTGACTCTCTCTAATTCGATCTTCAAGGGACA AAAAAAATTTTCTTCGAATTAGAGAAACATTCGAAACACAGAAATTATTT TATACTAATTTCCAGCTGAGAGGACCAATGGTTCAGTTTGAATTATAGAA AGATTCGAATATTCGAATAGAGGTTGGAATTAGAGAGAGTTGATTGTACG CGTTGTCTCTTTATCTCTTGTTTGAAAACCATTAATCAGTGCACTCTTGG CCAATATTGAGGCTATCGATTCAAAATATTGTTGATGGAATTATTGCAAT TTTAGTTTTTTTTCCAAATGGAAATATATTCATTTGAGCATGATAAAAAG CTTTTGAGCTTACACCATCATCAGTTGTCGTATTAGTTCACAGACCCGCG AAACCCCAGACCCACTGGAAAATTTGGCCAAAATTTCGTCCCCTGTGGTA AAAATACCCTAAAATTTCAGACTTAGTGGGAGACTGATTTTGATTTCATA CCCACTCAAAATTCAATATAAAAAATTGCACTCCAAAACCAATTAAAAAC ATTTCTGAGAAAACTGAGACTCTTTTTACTTTGCTAACTCAAAATTTTGC ATTTTGCATTTCTTGCAGTGTGGAAGGATCTTATTTACGAGAGAAAAAGG CGAATCCCAAAATTTTCAGCAAAGTAAAGTAATTAAGTCTTTAGTTTTCT CAAGACACTATTTTGAGATTGGAACTTTTGCGTCTCGATCGCAGAGATAT AAAGCTTAGTGTCTATAATGCTTTCTTATTCATAGGTACATGCTCGGGCT ACAGTTGGGACATCACTTTCTACACCGTCGGTGGAAACAAACAGCAGTTA GAGATCATCAATAGTACGTTAGCAGGGTTGGAAATGGAAAAAGGTGTCAA GACCATTCAAGATGGCGGCATGTTATTCGGGCCGTTGACTGGAGAGTTTT TACAAACAGCTGAAACAAAACCTCAGGTGATTTTTTTTTAGTTTTCTTTA ATTCACTTCTTTAGACAAGGTAAGGTTCAGGCTTTAAAAGGGTTGAATCC ATGGCGTTCTAAATCTACAGGCCTAGCAAGCGTGCAGGACGTCGATTTTT ATGGGATTTAATTTTCTAAAAAGATTTGAAGACACTGCATTGTAGATTTA GAATGCTATGGTCGAATCAAACTCTACATCTGTGTCTATTACAATGTAAT AGCTACACACATTGCAGCCATTCGAACTTTTTAAAATCGCTTTCAACCAC TTTTCGTTTAGGGTCTGGCACAAGGGTTGCCTTGTGTATAAGAGTATAAA ATAGAGTCTGGTTAGCATTGGTTAGGCATGATATTTTGTTTATAGGGAAT GAGCCCAATATTGATCTCGGCTCCATTTCAATTTCTAGGTTGTTGTTTCC ATCAATGATATTGTGAGTGTATGCAAGGGTGATTGTTCTTTCGAATATTC TGACGCCCTTACGCCCACTATCAGCTCAATCACGCCCAAGACTGGAAAGG GTGGTGAAGCAAGTCAAGAAGTTACCATTTCGTGTACTGGTTGTTTAGCC GGTGCCGATAAGAATGACGTCACAATTGGTGGTGTGAAATGCATGATTAC TACGGCTACCGAAACTGAAATCAAGTGCCGTCCAGGTATTGTTAAAACTC TTCAGTTGAGACACGCGGAACTTAGTCAGATCATCAATCTTAAAGATTCC GATATGTTAGATTTTTCTATCCATAAGCGATACTTATAGGTGACAAGAGA AACTATTCTTAAATAGAGCTTTAGTGAGTTTCATAAGAAACGAGTGCGCA AACGGATAAAGGATTTTTTCTTAAAACTTTCCTATATAACGTATAATTTC CCTTGAAGCATCCTTTGTCAAATACCTAGCAACAACTCTCTAACAATCTC GGTGATTTTGTCCTTAAGTATCGGCTTTAGATGTTTGCTGGCCACGAAAA TCCAGTGCTTGAAACGCATGGGGATGTGGCTGGCCCTTACTGTCTATCTC TCCAATTTTCTAAATTTTTAATAGCTTTTATTATTATCATAATTTTCAGG TACATCGCCCGCAGGAAATAAACCAGTAGTGGTCAATGTCCATGGAAAAG GGAAAGCCAAAACATCGAATGGAGAACCCATCCTTTTCAAGTAAATTTTT TTGTCTTAAAACGCCATAATTTTTTTAGAATAAGAATTATCGCCCTAATA CATCATATCTACTACCTTAATTTAAACGGTCAACGATCCATTAGGGGTTA AAAAAAAAAAATCATTTTTGGTCAGAAACCTTGTTACTGTTGGGATGCCC TGCAACCTAATTGCAACCGACATATTTTTGGAAAATGAAGTGGTTTCAGG ATATGACCAAATGATGGAAGACGGGTGAAATGGAAAATTACATTTTTGGC TTTTCTAGGGGTTAATGATCTGTTTTTTTTTTTACAGATGTGTATTTTTT ATGTACCCAACAAAAAAATTCCTGTATACAATGTCTTTTTTCTCACTTTA TAGCTACGAATTAGAAGTCAGTTCTATGGAGCCTAAAAGCGGTGCCGCGG CCGGTGCACAAATTACCGTAAAAGGCAATTTTGATAAAGAAGAAAACATC ACGGCAACTTTCACAAAAGTGACGTCATCAACGTCACGCAAACGTCGGAA CGCCGATGACGTTTATGTATTAGCAGTTAGACGTGTCGACGAAGGGCAGT TGATGGTAACAACGAACTCGATGCCAGATGCGGAATATCAGTTGACCGTA AGTGTATAAAAAAACTTTGAACCCTTCAGAACCGAATGGTGTGTATACTA TTGTTTTTAAGAGCTTAATTGGGCCGTTTAATTTTATATCCATACAAGGG GTGGACGAACATTTCCATGAGCCTGTTTTCATTTTTTCAGGGGGTAAAAA ATTATTCTAAAAATTCTAGGGGGTAAAAGACTGATTTTAATTGTCCATCG TCACGTTTAAGGTATTTAGAAAAAACATTTCTGACATGAAAAGGTTCGTC CACCCCTTTATGATTTTTAATGGAACAGCCCATTTATCACATTGTAATAT AAATCCAGTCCGGTTACTTAATTCAAAGGTTTATGAACCACTGTTAGATA GAGTCTCAAAAATCTTTTGAAAATTTTCAAATTTGAAAAATTTATGCGTG CTGGAAAGGTTTATCGAGGGGAAATTAAAATCTACCTAGTCAATGTAAAT TTACTTAACTCTGTTGGATATAAAACTTAATCGGGGGAAACATGATAATA TCGACACTTTGTGAATATTTAGCTGGCAGCTTTATTTATCTGAAGATTTT TGAATTCGCCGTTTGAAGTTATTTTTTTTTCTCCATAAAAAATCGGCTTC CCCAAAATAAAATAGGGTTCCTAAAAACAAAATTAAAGAAACATGACGTC GACATAGCATCCGCCCGACGTGGCCCACCTGGGCGTCCCGCCATTTTAGT GCTACTGTTCTTTGGTTCCGTACGATATTGGCTATACTCTTAAAGCACTT CTGAGATCCAAGATGGAGGCGTACAAGTCAAGAAGAAGAATTTTACCACC CTCCCGCCCTACAGATATTGGTTGCCGGTAACCCTTTTCTAGTTTATGTT AGTTTATCACAAGACGATGCTATCGTTTGTTTAGAGGTCAGTGAACGCAG GAAAGAGTTAGGGCGTCAGGGCGGTTTACGGGAAAAAGTGGCGGTAGAGT TTTGGAACATTGTAAACATTTCCGCCACTGCTTACTGAATTTATCACGCC TCTCCTAAACTATTCCCTTTTTTAGTGATCTTGTGTAGACGATAGGATCG TCTAGTTTATCACAAGCAACGGGACTAATTTTTCCCTAAAACTGATTATG GGTTAGCCAAATATTTCAATGCCAAAACCTAAACGCAATTGTCTCAGTCT CAGTCTCAATCTGCTTCCTCCCTACCAAGTTGTACGATTTTGGAGCCTAA TTATTTTATTTAATTCTGTTTTAGATCACTAATGGTGACCATACATACAC AACCACCGAGAAATTCACAGCTGATTCAAGTCAAAATGTTGCCATCACAT CCATAACCCCTGACACTGGCCTCCCTGTTTACGGCGGCGTCGATATTGTA ATCAAAGGGTCCAATCTAAAAGATGACATGAAGGAAACTGAAGTTCATAT TATTGATCCTTTTGGTCCGAGGTGTGAGATTCAATATTTAACTCAAGATG AGATTCGATGCACATTGCCACACATTACCATCATTGGCGAGGTCACTGTG CTTGTCCATGTAAAAGATAAAGGTATGCTTCACTTTGTTAAAAGGTTCAT TTTTTTCAAGAATTTTAATTTTCGGGTTTTTCGGGTTTTAGCGGCAAAAC GAGGCTGAAAATCGTTTTTTAAATTACAGTTAGATTAGATGAGNAATTCA ATCTTTAACTCAAGATGAAATTCGATGCACATTGCCACGCATTACCATCA TTGGCAAGGTCACTGTGCTTGTCCATGTAAAAGATAAAGGTATGCTTCAC TTTGTTAAAAGGTTCATTTTTTTCAAGAATTTTAATTTTCGGGTTTTCGG GACGGGTTTTAGCGGCAAAACGAGGCTGAAAATCGTTTTTTAAATTACAG TTAGATTAAATGAGAGAGATGTGATTTTCTGGATCAAAGTTTCTTATCCG TTAATTTTTAATAATACAATAGACCTTTTCATAAATTACGCCACGAACAT CACTTGCCTCGTTTTGAAATTATTGCCAAGGTGATTAACTCCCAGCGGAT TTTTTTTCAACTACCTTCTATTCATAAAAAAATGATTTAATATCTCAAGG GATATAATCACCATGGTAATTGTTTGAATACGGGGCAAGTGATATTCGTG ACGTAATTCAAGTAAAGGTCTATGTGTGCAAGGTTTGATATCAAAATATA CCTTGCGATTTTTACGATATCTGACTGATTTGAGATTTATTTTGGTTCCC ATTTTCGTCTTTAGGTACTTCTTTGAGTTCAATC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041319XLOC_041319Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065959-exon-scaffold_448-1575043694:422873..423076TCONS_00065959-exon-scaffold_448-1575043694:422873..423076Clytia hemisphaericaexon
TCONS_00065959-exon-scaffold_448-1575043694:422490..422572TCONS_00065959-exon-scaffold_448-1575043694:422490..422572Clytia hemisphaericaexon
TCONS_00065959-exon-scaffold_448-1575043694:421417..422145TCONS_00065959-exon-scaffold_448-1575043694:421417..422145Clytia hemisphaericaexon
TCONS_00065959-exon-scaffold_448-1575043694:420828..420920TCONS_00065959-exon-scaffold_448-1575043694:420828..420920Clytia hemisphaericaexon
TCONS_00065959-exon-scaffold_448-1575043694:419851..420041TCONS_00065959-exon-scaffold_448-1575043694:419851..420041Clytia hemisphaericaexon
TCONS_00065959-exon-scaffold_448-1575043694:419192..419438TCONS_00065959-exon-scaffold_448-1575043694:419192..419438Clytia hemisphaericaexon
TCONS_00065959-exon-scaffold_448-1575043694:418687..418777TCONS_00065959-exon-scaffold_448-1575043694:418687..418777Clytia hemisphaericaexon
TCONS_00065959-exon-scaffold_448-1575043694:418080..418323TCONS_00065959-exon-scaffold_448-1575043694:418080..418323Clytia hemisphaericaexon
TCONS_00065959-exon-scaffold_448-1575043694:416568..416852TCONS_00065959-exon-scaffold_448-1575043694:416568..416852Clytia hemisphaericaexon
TCONS_00065959-exon-scaffold_448-1575043694:416338..416350TCONS_00065959-exon-scaffold_448-1575043694:416338..416350Clytia hemisphaericaexon
TCONS_00065959-exon-scaffold_448-1575043694:415843..415862TCONS_00065959-exon-scaffold_448-1575043694:415843..415862Clytia hemisphaericaexon
TCONS_00065959-exon-scaffold_448-1510915933:422873..423076TCONS_00065959-exon-scaffold_448-1510915933:422873..423076Clytia hemisphaericaexon
TCONS_00065959-exon-scaffold_448-1510915933:422490..422572TCONS_00065959-exon-scaffold_448-1510915933:422490..422572Clytia hemisphaericaexon
TCONS_00065959-exon-scaffold_448-1510915933:421417..422145TCONS_00065959-exon-scaffold_448-1510915933:421417..422145Clytia hemisphaericaexon
TCONS_00065959-exon-scaffold_448-1510915933:420828..420920TCONS_00065959-exon-scaffold_448-1510915933:420828..420920Clytia hemisphaericaexon
TCONS_00065959-exon-scaffold_448-1510915933:419851..420041TCONS_00065959-exon-scaffold_448-1510915933:419851..420041Clytia hemisphaericaexon
TCONS_00065959-exon-scaffold_448-1510915933:419192..419438TCONS_00065959-exon-scaffold_448-1510915933:419192..419438Clytia hemisphaericaexon
TCONS_00065959-exon-scaffold_448-1510915933:418687..418777TCONS_00065959-exon-scaffold_448-1510915933:418687..418777Clytia hemisphaericaexon
TCONS_00065959-exon-scaffold_448-1510915933:418080..418323TCONS_00065959-exon-scaffold_448-1510915933:418080..418323Clytia hemisphaericaexon
TCONS_00065959-exon-scaffold_448-1510915933:416568..416852TCONS_00065959-exon-scaffold_448-1510915933:416568..416852Clytia hemisphaericaexon
TCONS_00065959-exon-scaffold_448-1510915933:416338..416350TCONS_00065959-exon-scaffold_448-1510915933:416338..416350Clytia hemisphaericaexon
TCONS_00065959-exon-scaffold_448-1510915933:415843..415862TCONS_00065959-exon-scaffold_448-1510915933:415843..415862Clytia hemisphaericaexon
TCONS_00065959-exon-scaffold_448-1491911889:422873..423076TCONS_00065959-exon-scaffold_448-1491911889:422873..423076Clytia hemisphaericaexon
TCONS_00065959-exon-scaffold_448-1491911889:422490..422572TCONS_00065959-exon-scaffold_448-1491911889:422490..422572Clytia hemisphaericaexon
TCONS_00065959-exon-scaffold_448-1491911889:421417..422145TCONS_00065959-exon-scaffold_448-1491911889:421417..422145Clytia hemisphaericaexon
TCONS_00065959-exon-scaffold_448-1491911889:420828..420920TCONS_00065959-exon-scaffold_448-1491911889:420828..420920Clytia hemisphaericaexon
TCONS_00065959-exon-scaffold_448-1491911889:419851..420041TCONS_00065959-exon-scaffold_448-1491911889:419851..420041Clytia hemisphaericaexon
TCONS_00065959-exon-scaffold_448-1491911889:419192..419438TCONS_00065959-exon-scaffold_448-1491911889:419192..419438Clytia hemisphaericaexon
TCONS_00065959-exon-scaffold_448-1491911889:418687..418777TCONS_00065959-exon-scaffold_448-1491911889:418687..418777Clytia hemisphaericaexon
TCONS_00065959-exon-scaffold_448-1491911889:418080..418323TCONS_00065959-exon-scaffold_448-1491911889:418080..418323Clytia hemisphaericaexon
TCONS_00065959-exon-scaffold_448-1491911889:416568..416852TCONS_00065959-exon-scaffold_448-1491911889:416568..416852Clytia hemisphaericaexon
TCONS_00065959-exon-scaffold_448-1491911889:416338..416350TCONS_00065959-exon-scaffold_448-1491911889:416338..416350Clytia hemisphaericaexon
TCONS_00065959-exon-scaffold_448-1491911889:415843..415862TCONS_00065959-exon-scaffold_448-1491911889:415843..415862Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_448supercontigscaffold_448:415843..423076 -
Expression
No biomaterial libraries express this feature.
Blast
BLAST of TCONS_00065959 vs. Swiss-Prot (Human)
Match: PKHL1 (Fibrocystin-L OS=Homo sapiens GN=PKHD1L1 PE=2 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 7.352e-40
Identity = 116/426 (27.23%), Postives = 201/426 (47.18%), Query Frame = 2
Query:  920 IDIQQQQYPSPPVTGTFVLKYTGENGEEHFSRRIKPDVSEEEMREHVELAFHHI--TGHVKVVRKGTCSGYSWDITFYTVGGNKQQLEIINSTLAGLEMEKGVKTIQDGGMLFGPLTGEFLQTAETKPQVVVSINDIVSVCKGDCSFEYSDALTPTISSITPKTGKGGEASQEVTISCTGCLAGADKNDVTIGGVKCMITTATETEIKCRPGTSPAGNKPVVVNVHGKGKAKTSNGEPILFNYELEVSSMEPKSGAAAGAQITVKGNFDKEENITATFTKVTSSTSRKRRNADDVYVLAVRRVDEGQLMVTTNSMP---DAEYQLTITNGDHTYTTTEKFTADSSQNVAITSITPDTGLPVYGGVDIVIKGSNLKDDMKETEVHIIDPFGPRCEIQYLTQDEIRCTLPHITIIGEVTVLVHVKDKG 2182
            I IQ+ Q  SPP++G+F ++  G     H  + +   VS  ++    + A   +   G + V R+GTC+GY+W+I + +  G +  L+I +S + G +    V  I++GG+    + G+ L+T   +PQV V +N I + C GDC F +   +TP + +I+P  G   E +  +TI  +G  + +    V++G V C + +  E E+KC+     AG+ PV V++   G A+   GE   F Y+ ++S + P SG+ AG  +     F   EN        T +                  V EG L   T   P   +    +++T      T  + F+ +  Q   IT  +P     + G V++ IKG N  +++ +     +   G  C+I +    +IRC LP ++  G+  + V V++ G
Sbjct:  922 IHIQRIQAASPPLSGSFDIQAYG-----HILKGLPAAVSAADL----QFALQSLEGMGRISVTREGTCAGYAWNIKWRSTCGKQNLLQINDSNIIGEKANMTVTRIKEGGLFRQHVLGDLLRTPSQQPQVEVYVNGIPAKCSGDCGFTWDSNITPLVLAISPSQGSYEEGTI-LTIVGSG-FSPSSAVTVSVGPVGCSLLSVDEKELKCQILNGSAGHAPVAVSMADVGLAQNVGGEEFYFVYQSQISHIWPDSGSIAGGTLLTLSGFGFNENSKVLVGNETCN------------------VIEGDLNRITCRTPKKTEGTVDISVTTNGFQATARDAFSYNCLQTPIITDFSPKV-RTILGEVNLTIKGYNFGNELTQNMAVYVG--GKTCQILHWNFTDIRCLLPKLS-PGKHDIYVEVRNWG 1314          
The following BLAST results are available for this feature:
BLAST of TCONS_00065959 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PKHL17.352e-4027.23Fibrocystin-L OS=Homo sapiens GN=PKHD1L1 PE=2 SV=2[more]
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