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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00065961 ID=TCONS_00065961|Name=TCONS_00065961|organism=Clytia hemisphaerica|type=transcript|length=752bp
CAGAAACTGAATAATTATTTGCTGCCAATAATGAACCACTACAAACTAAA
CAGTTCTCAATTGTGTGTCTGTGGTTGTCAAACAAAACCATTGACTGATT
TTCATCATCAGCAATATCATAATCaaataaagttttaattttaattttaa
attctgAGATGTGTTTAGCATTTCTATAGTTTGCTTGATATTTAATCTTT
GATGCACAAAGTCTGCAAATCTTATCGAGTATTTCACAATGATTCTCCAT
CGATCCCAGAGATTCTAAcacaattcaaaaattaaacGACCATGAAACAA
ACAACGACATTTTAAAGGAAAAGCCACTTTCAAGGCTGCACCACGACATA
TTACTCTGCTTTCCAGCTAGATTCTGGTTTCTTGATctaatttttgcttt
atttatTACACGTGATCGTGTTATAATAGAGTGGGGAAAAGATCGGGAGA
AAATAAAAACCACGTGATAATCAAAATTAGAAGATACGCAACGTTGTCTG
AAAACAGAAATAAAATGGCTGACAACATGACATTTGATAGTGACTTCAAC
TACCATGAGGTTTAAGCTAAGGTCTTTTGAGGtctcaaaaaaggcaaaaa
tccTTTGGTACCAATCGAAAGAGGAATAAATTTGGCATCTATATCTTAAA
GGGTTTTAAAATTGGTGTTGATCTTGTTGAGATATTAAGCTCTAAAGTCA
CTTCAAAATTATCTCTGTTTTTAGCTAACCTTCGTTTACTACTTGTTCAA
TG Run BLAST on NCBI transcript from alignment at scaffold_448:446344..447174- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00065961 ID=TCONS_00065961|Name=TCONS_00065961|organism=Clytia hemisphaerica|type=transcript|length=831bp|location=Sequence derived from alignment at scaffold_448:446344..447174- (Clytia hemisphaerica)
CAGAAACTGAATAATTATTTGCTGCCAATAATGAACCACTACAAACTAAA
CAGTTCTCAATTGTGTGTCTGTGGTTGTCAAACAAAACCATTGACTGAAT
TTGATAGTCTATTTTTGTGGTCCACTTTTCTCAATTTTTTCACACAATTA
CAGCACAAGTATTCAGGATCCTTGGACTTTTCATCATCAGCAATATCATA
ATCAAATAAAGTTTTAATTTTAATTTTAAATTCTGAGATGTGTTTAGCAT
TTCTATAGTTTGCTTGATATTTAATCTTTGATGCACAAAGTCTGCAAATC
TTATCGAGTATTTCACAATGATTCTCCATCGATCCCAGAGATTCTAACAC
AATTCAAAAATTAAACGACCATGAAACAAACAACGACATTTTAAAGGAAA
AGCCACTTTCAAGGCTGCACCACGACATATTACTCTGCTTTCCAGCTAGA
TTCTGGTTTCTTGATCTAATTTTTGCTTTATTTATTACACGTGATCGTGT
TATAATAGAGTGGGGAAAAGATCGGGAGAAAATAAAAACCACGTGATAAT
CAAAATTAGAAGATACGCAACGTTGTCTGAAAACAGAAATAAAATGGCTG
ACAACATGACATTTGATAGTGACTTCAACTACCATGAGGTTTAAGCTAAG
GTCTTTTGAGGTCTCAAAAAAGGCAAAAATCCTTTGGTACCAATCGAAAG
AGGAATAAATTTGGCATCTATATCTTAAAGGGTTTTAAAATTGGTGTTGA
TCTTGTTGAGATATTAAGCTCTAAAGTCACTTCAAAATTATCTCTGTTTT
TAGCTAACCTTCGTTTACTACTTGTTCAATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00065961-exon-scaffold_448-1575043694:447077..447174 | TCONS_00065961-exon-scaffold_448-1575043694:447077..447174 | Clytia hemisphaerica | exon |
| TCONS_00065961-exon-scaffold_448-1575043694:446344..446997 | TCONS_00065961-exon-scaffold_448-1575043694:446344..446997 | Clytia hemisphaerica | exon |
| TCONS_00065961-exon-scaffold_448-1510915933:447077..447174 | TCONS_00065961-exon-scaffold_448-1510915933:447077..447174 | Clytia hemisphaerica | exon |
| TCONS_00065961-exon-scaffold_448-1510915933:446344..446997 | TCONS_00065961-exon-scaffold_448-1510915933:446344..446997 | Clytia hemisphaerica | exon |
| TCONS_00065961-exon-scaffold_448-1491911889:447077..447174 | TCONS_00065961-exon-scaffold_448-1491911889:447077..447174 | Clytia hemisphaerica | exon |
| TCONS_00065961-exon-scaffold_448-1491911889:446344..446997 | TCONS_00065961-exon-scaffold_448-1491911889:446344..446997 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_448 | supercontig | scaffold_448:446344..447174 - |
Blast
The following BLAST results are available for this feature:
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