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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00065997 ID=TCONS_00065997|Name=TCONS_00065997|organism=Clytia hemisphaerica|type=transcript|length=209bp
AGTGAAGCACATCTCCTCACAAACACACAAGGTGATATGTCTGATGAGAA
GACAAAAACACCGGCAGCTGAGGATCTCATGTTCGAAGATGGCGTCCGAA
GAATCGACATCATTTTCGCGTATGAAGCGAACGCTGAACTTGATCCACAG
CGACAAAAATATTTAGACAATTTGAAAGTGTTAGGATTGGAATTTGAACA
AGCAAAAAT Run BLAST on NCBI transcript from alignment at scaffold_448:662150..672040- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00065997 ID=TCONS_00065997|Name=TCONS_00065997|organism=Clytia hemisphaerica|type=transcript|length=9891bp|location=Sequence derived from alignment at scaffold_448:662150..672040- (Clytia hemisphaerica)
AGGTACATGTTTCTATTTGAACATTTCTCATTTTCTTACTAAATTATTCA
CTGAAAATGCTAGTAAATCGATAACTTAACTCGGCCCGCTTTTCGCCCTG
CCTATTCTAATTGTGAATTAAAGTGGGGGAAAAGTTGGCTGTCTAAAGTC
AACGCAGTGCTCTCTTTTGAGGGAAATGCAATGTCTTATTTCAAGCGAAG
ATTTCAACTGCAAACTTTCTGCCCACTTTTTGCCTATTCTGACAATTGGA
ATAGGCAGAGATGAAAGCTGGCCGTCTAAGCTAGAGCTATGACACTACCT
CCAAGATCTTTGGCATTTCTACTTTGACTGCGAAGGGAATCTTTGAGTTA
AGGAGAGGCTAAATAGCCTGAGAGACTCAGGGATCAAGAGAGGTTCAAGT
TATGATCATAGATTTATAAAGCCCGAAGGGCTAGATGTCGAGCTTTAAGC
CATCGCAGGCAAAAATAGTGAATATCGGAAGAAATATTGTTGCTATTGTT
TTCGAAAACCCGCGAAGCTTCTGATTGGTCAATCGCTGAAATTCTATTGT
AATATCACGTAACTTAGGTAGGTTTTCCTACCTAACCACGGCACACGTTT
CAGCAAAAGCTTTACATCTAGTCTTTCGGGCTTTATAAATCTATAGTTAT
GATGCTCCGGCTGTAGGATATGAAGCCACGCCCCTTTTGTCTCAGCTGGA
GGGTCGATGTCTTTTGTGCTGATGCAGGGTTGTTCCTTTTGTTATGCGAA
AAGCGATTAGTTTAAGATTTTATGCTTATTGACTTGATTAGATCTACGAT
ATGATCAACTGAAGCAAGAAAGAGCGTTGGTGAACTCAGACAGATATAAA
ATATAGGTTTGAAAATGTTCTTAGGCGTCAAGAATGAAAAAGTTACCATG
GTTTTAGATTTTCATTGGCTTGACAAAGTAAAGCCAATACTTTCTTTTTT
CTAGTGAACTCCGGTTTCAGTTCTCGCTTATATGTAAGAATCAAGATATC
GCAAATTATAAATTAAGCCTTGGAAAAATTCTTTACATATCTTAAAAGTA
AGGGTGGACAAACTAAAATCAGTCTTTTACCCCCTAGAAATCAAAACTTT
TACCTCCTGGAAAAAATGAAAAAATACTTCGTTATACCCTCTGGAAATTT
TTCCGGGATTACGCTCTGGAAGTGTTCGTCCATCCCCCTGTATGGATATA
AAATGGAATGGCCCAATTGAGATTTTAATATTTGATTTATAACACCATGC
ATATTGAAATAATGTTGCCTTGAATTAGTGGTAATTTCAGGTTTAAAGTC
TCCTATTGGGAAGTGACGAGAGTATGATTTTCAGGTAGAAAGTGGGACGT
TTTTAACCGGATTTTTTTTCGTTGTGATTGGGTGTTCCACTTGATCTCTC
TGAAAAGGAACGGGGAGTTTTTTGTTTTTTTTGTTTTTTGACTTTTTGCA
TATTTCCGGACGTAGTCTCTGTACTAATAAATCGATCAATGACATTTGAG
ACATTTACATAGGAATATTTTATTATCAAAAACGAATTGAATTTTCCTGG
ACTACAAAACTAGTCCCTTTCTCTCTTAATTCCAATGAAATTGAGAATTT
CCATATATTCTTTCAATGGAAAACCTGTTCTACCTTAGATATTTAACTAG
CTTTAAGTTATACGAGGTTCAATACAAGTTTTTTTAAGAACAAACTACAT
AAGAACATAAGGCTTCGATGGCCAAAATATTAAGGACAAGTTAAGAGCAT
TTTAAGGCTTTGCGAACTCCCAATTTCTTAGGAAAGTTGACCAAAATACT
CACAAAATGGCGAAATTAAGAACATTTTAAAAACATTTTAGGCTTAAAAC
TTAAAAAGTTAAGAACACCCGATAGCTTAAAAAATGTTGGATGTTCTTAT
AAAAAAACGTGAAGATGAAAGACCCTTGGAAGCTAGTGTCTCACTATTTC
GTTATGTTTATAGGGCTCTAATTTGAGCTTGGGTCTAGATGATTGTAATT
CAACGTGGAGAGAGTGATATGGTTTAACACCCTGTTTATTAAAGGACTTT
ACGTTTGAAACTTAATCTGAGGTTTTATTTACACATTCACGGCTATCAAA
TTTCGTGGTAAAGAGATGGATTCTTTTGCATATAAATGGTGATTTGTCAA
CATTGACTTTTTACTACACCAGTGTACAGTCAATGAAAATTTTCCGTAAC
AGCGGGAGAGATCTTAATAACCCCATATTAGGATTGAAGATTCTTTAAAC
TCTCTCCCCCTCTTGGAGGATTTCATGACATTTTTTCTCTCTGGTGTTTG
GTGACATATTAACTCGTCATGTTAAGCAAATAGGGATGAATTTCCTACGA
AAGTTGATGACTTGCAAATAGTTGTTTTTCTTTGGTGCAACTTCGCTTCA
TTTTTTGTAAATTGATTTGCTGTCTAGTTTTAGGATAGGCTTTCTATGAC
TTCCTTCCTTAAGGCATACACAGCCTGGTGTGTGATATCTTTTAAGATGT
AAAGCCTGGTTAGGAAGCCCCCAGCGGTTTTCGTGATGGAGTGATTGGCG
TTTTTTCAAGTTTGTGATTTCGTGATTTAAGATTTTAAAGTGCGTGATTT
GATTGTGTGATTGGAGGAACCAACGTGATCAACGTGATTGTGATAGAAAG
GAAATTTAACTCGTGATAACGTGATTTGGAATTTTTTTGCGTGATAGCGT
GATTTGAAAAGTGACTGGGGGGTCTGGTTATCTTAATTTCTTGTTATATT
CTCCCATCGGGGTTCAAGATTGGTCTTTAAGCGTTATGTAGAAAGAGTAG
AGTATAGTGTTTGTTATAAGGCGAGACCAATTTGATTAGTTGTTTTACGG
GCCCGACCGACCCTGTGAAATTCCATAAATCGAAATAAAAATAAAATTGA
TTTTGGTAGTACCTTTTTATTTTCTTTGCTTTACAGACTGCCAAATTTTC
AAAAATTTTGTAGTTTTTCCAAGGTTTTGAGAATTTTATGTCCAATTTTT
CATTTAATCCATGAATTCAAGATATATTTTTTGTATCTTTTTAATTTCTG
TTTTTTTAGGAGGCTCTACGTAAAATTCTACTTTTATTTTTATTTTTTCG
CCGCCGACCGACCTTCTTTTTTGGGTAGCTTGGCCCGTAAAACAACAAAT
TAAATTGGCCTCGCCTAACAAAACATATCAGTAGAATGCTGACAGACCAA
GTTCTCGTTATTTTTACGGTTTTTAAACTCCGGTTTCAGTTCTCGCTTAT
ATGTAAAAATCAAGATATCGCAAATTATAAATTAAACACGAATACAGAAT
GGGCTGTTCCATTAAATTTCCATACAAGAGGGTGGACGAACCTTTTAAAG
GAAAATAAAGATTCTTAGAAATATGTGAATACCCCTGGAAATTTGCAAAA
GAACCCTTGGAAAAATTCTTTACATACCTTAAAAGTAAGGGTAGGAAGAA
CTAAAATCAGTCTTTTACCCCCTAGAAATCAAAACTTTTACCTCCTGGAA
AAAATGAAAAAATACTTCGTTATACCCTCTGGAAATTTTTCTGGGATTAC
GCTCTGGCAATGTTCGTCCATCCCCCTGTATGGATATAAAATGGAATGGC
CCAATTGAGATTTTAATATTTGATTTATAACACCATGCATATTGAAATAA
TGTTGCCTTGAATTAGTGGTAATTTCAGGTTTAAAGTCTCCTATTGGGAA
GTGACGAGAGTATGATTTTCAGGTAGAAAGTGGGACGTTCTTAACCGGAT
TTTTTTTTCGTTGTGATAGGGTGTTCCACTTGATCTCTCTGAAAAGAAAT
GGGGAGTTATTTTTCAACTTTTTGCATATTTCCGGACGTAGTCTCTGTAC
TGATAAATCGATCAATGACATTTGAGACATCTACATAGGGATATTTTTTA
TCAAAAATGAATTGAATTTTCCTGGACTACAAAACTAGTTCCTTTCCCTC
TTAATTCCAATGAAATTGAGAATTTCCATATATTCTTTCAATGGAAAACC
TGTTCTACCTTAGATATTTAACTAGCTTTAAGGTATATGAGATTCAATAC
TGATGGAAGACCCTTGGAAGCTAGTATCTCACTATCTCGTTATGTTTATA
GGGCTCTAATTTGAGCTTGGATTTGGATGATTGCAATTCAACGTGGAGAG
AGTGATATGGTTTAACACCCTGTTTATTAAAGGACTTTACGTTCGAAACT
TAATCTTAAGTCTGAGGTTTTATTTACATATTCACGGCTATCAGATTTCG
TGGTAAAGAGATGGATTCTTTTGCATATAAATGGTGATTTGTCAACATTG
ACTTTTTACAACACCAGTGTACAGTCAATGAAAATTTTCCGTAACAGCGG
GAGAGATCTNACAACACCAGTGTACAGTCAATGAAAATTTTCCGTAACAG
TGGGAGAGCTCTTAAAAGCCCCATATTAGGATTGAAGATTCTTTAAACTC
TCTCCCCCTCTTGGAGGATTTCATGACCTTTTTTCTCTCTGGTGTTTGGT
GACATATTAACTCGTCATGTTAAGCAAATAGGGACGAATTTCCTACGAAA
GTTGATGACTTGCAAATAGTTGTTTTTCTTTGGTGCAACTTCGCTTCATT
TTTTGTAAATTGATTTGCTGTCTAGTTTTAGGATAGGCTTTCTATGACTT
CCTTCCTTAAGGCATACACAGCCTGGTGTGTGATATCTTTTAAGATGTAA
AGCCTGGTTAGGAAGCCCCCAGCGGTTTTCGTGATGGAGTGATTGGCGTT
TTTTCAAGTTTGTGATTTCGTGATTTAAGATTTTAAAGTGCGTGATTTGA
TTGTGTGATTGGAGGAACCAACGTGATCAACGTGATTGTGATAGAAAGGA
AATTTAACTCGTGATAACGTGATTTGGAATTTTTTTGCGTGATAGCGTGA
TTTGAAAAGTGACTGGGGGGTCTGGTTATCTTAATTTCTTGTTATATTCT
CCCATCGGGGTTCAAGATTGGTCTTTAAGCGTTATGTAGAAAGAGTAGAG
TATAGTGTTTGTTATAAGGCGAGACCAATTTGATTAGTTGTTTTACGGGC
CCGACCGACCCTGTGAAATTCCATAAATCGAAATAAAAATAAAATTGATT
TTGGTAGTACCTTTTTATTTTCTTTGCTTTACAGACTGCCAAATTTTCAA
AAATTTTGTAGTTTTTCCAAGGTTTTGAGAATTTTATGTCCAATTTTTCA
TTTAATCCATGAATTCAAGATATATTTTTTGTATCTTTTTAATTTCTGTT
TTTTTAGGAGGCTCTACGTAAAATTCTACTTTTATTTTTATTTTTTCGCC
GCCGACCGACCTTCTTTTTTGGGTAGCTTGGCCCGTAAAACAACAAATTA
AATTGGCCTCGCCTAACAAAACATATCAGTAGAATGCTGACAGACCAAGT
TCTCGTTATTTTTACGGTTTTTAAACTCCGGTTTCAGTTCTCGCTTATAT
GTAAAAATCAAGATATCGCAAATTATAAATTAAACACGAATACAGAATGG
GCTGTTCCATTAAATTTCCATACAAGAGGGTGGACGAACCTTTTAAAGGA
AAATAAAGATTCTTAGAAATATGTGAATACCCCTGGAAATTTGCAAAAGA
ACCCTTGGAAAAATTCTTTACATACCTTAAAAGTAAGGGTAGGAAGAACT
AAAATCAGTCTTTTACCCCCTAGAAATCAAAACTTTTACCTCCTGGAAAA
AATGAAAAAATACTTCGTTATACCCTCTGGAAATTTTTCTGGGATTACGC
TCTGGCAATGTTCGTCCATCCCCCTGTATGGATATAAAATGGAATGGCCC
AATTGAGATTTTAATATTTGATTTATAACACCATGCATATTGAAATAATG
TTGCCTTGAATTAGTGGTAATTTCAGGTTTAAAGTCTCGTATTGGGAAGT
GACGAGAGTATGATTTTCAGGTAGAAAGTGGGACGTTTTTAACCGGATTT
TTTTTCGTTGTGATTGGGTGTTCCACTTGATCTCTCTGAAAAGGAACGGG
GAGTTTTTTGTTTTTTTTGTTTTTTGACTTTTTGCATATTTCCGGACGTA
GTCTCTGTACTAATAAATCGATCAATGACATTTGAGACATTTACATAGGA
ATATTTTATTATCAAAAACGAATTGAATTTTCCTGGACTACAAAACTAGT
CCCTTTCTCTCTTAATTCCAATGAAATTGAGAATTTCCATATATTCTTTC
AATGGAAAACCTGTTCTACCTTAGATATTTAACTAGCTTTAAGTTATACG
AGGTTCAATACAAGTTTTTTTAAGAACAAACTACATAAGAACATAAGGCT
TCGATGGCCAAAATATTAAGGACAAGTTAAGAGCATTTTAAGGCTTTGCG
AACTCCCAATTTCTTAGGAAAGTTGACCAAAATACTCACAAAATGGCGAA
ATTAAGAACATTTTAAAAACATTTTAGGCTTAAAACTTAAAAAGNTAAGG
CGAGACCAATTTGATTAGTTGTTTTACGGGCCCGACCGACCCTGTGAAAT
TCCAAAAATAAAAATAAAAATAAAATTGATTTTGGTAGTACCTTTTTATT
TTCTTTGCTTTACAGACTGCCAAGAATTTTATGTCTAATTTTTCATTTAA
TCCATGAATTCAAGCTATATTTTGTGTCTTTTTAATTTCTGTTTCGCATT
TTTGTCACGATGTAATAGTTTTTGCTGCCTTTTTAGGAGGCTCTACGTAA
AATTCTACTTTAATTTTTATTTTTTCGCCGACCGACCGACCTTCTTTTTT
AGGTAGCTTGGCCCGTAAAATAACAAATTAAATTGGCCTCGCCTAACAAA
ACATATCAGTAGAATGCTGACAGTCAGGACGAGAGTAGTGGAGGAGCCCT
GGTTTCATATGATTGCATCTTATATGGATCAAAGGTCATGACATTCTGAT
ACAAATCAGACTTAAAGGTTTTCAGCTTTCCTGGTATGCAAAGCTGGAGT
CTCGACTGCTTTTTGTAACTCTATATAAAGCTAATAGCCTGATCAGTGGA
ATCTTTAGTAAAAGGTTTGTGACTCTTGTAACCATAGCTAGGTGGTTTCT
GGTGGTCAGTTATTAGAGTTTGGTGTATTGGTTGTAATCAATTCTGATCA
ATTCTCATTTTACTCAAATCTTTTGCGGGAGCTGATTTTCAGTGGCGTGA
TTGAGAAAATTCGTGGATTTTCCGTGGCGTAAAAATAAAAAGAACTTGGT
CAGGCCCGGCGGAACAACTGTTAAAGTGGGGAGGCTGAAGGCTCCCTGAA
ATTCGCTAGAAATTTGAGAAAAAAATCTAATTTGCTCAAAAGTGGGGAGG
CTGAAGTCTCCCCAGTCTCCCCGCTTCCGCCGGACCTGTTGGTTCAAAGA
TTTTAATGAACAATCAACCTTACAGAGCCAATTTTGACACATGTTGCTTA
ATGCCTGAGCAGAGTTTCAGACACATCCATACTGAAATATTTGCTCTCTC
AAACCTATGAAATGGGTTTACCGATGTCAATCGTTTTTACAATGAATTTT
TGAATCCAATCCCCAACAAGGCGTAGACTCTTCTTGATATTCAAGGTCTC
AAACACGTAAAACTTAATATTTTAAAATTAGAGAATCTTGGATCTATTGC
ATATTAGCCTGACTTTTGTTCCGTGAGCTACTATTTTTCCAGCATCTAGA
ATGTGGTACAGCATTGTGGTCACGCTAATGCCTTGTTAATTGAGGCTTTT
AATTGGGAAATGATTATAATCTATTGGAGTAGGCATTCCAATATTTCTGT
TTTAATATAAAAGAGGATTGACATTGTTTTTGTTGTGATCGTTAAGGAAC
CTCGTATTTTTTTTAAAGTTTTCGTTGATTGAAATGTGTGATTAGCTTTT
TCTGGATAGCTTGAATAAGGTTAGATGATTTTACATTTTAAGGTTTTTGA
GGTAGATTAGTATCCATAGTGGAATGAGTTGTTAGGTAAACTCTGTACTA
GAGTGCATTATTGACGCTTATTAGCGAGTTTACTCTCGGGTACCTAATAG
CCGTCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNTTCCCACCCCCCCCCCCCGCTTATTAAATTTTGAGATTTTTTCC
AACCCCCCTGCTTATTCCAACCCCCCCGGCTATTAGGTACCCGAGAGTAT
GTATTCGAGGTAAATAGAGGGGAACGGTATAAAGCAAAGTTGACATGTCT
CCAAATTCACCGTCCACTTTGCCCGACGACGGTAAAAACACCAAAATACC
GTCGTCTGTTTAGGTGAGCAAAGGCAATATAGAGGCGTACATCAACTATC
GACTTTCTTTTGTATCATTTCACTTACCGTCGCCCTCAATATCCTCCGAT
ATATAAACTCGGTATTTTTTATTCTACGGCAGTAAATTCTCAAATTTTCT
TCACTGCTTGATATATGTTTTATTGTCAGTTTTCCTATGTATGTATCCAC
CTTTTCGACCGTCCACCTTATTCTTTAATTTACCACTCGATCCAATCCTT
TTTTGACACTTTTTTCTATTGCCTCAGTTGCAAAAAAAAGACTGGGACGA
TTTTAAGGTGGTAAATCGGACAAAAATGCCCGCGCTGTAATTGGCGGCTG
CGGTCAAAAAGGTGTATTGTACTGGTGTAGGTTGCGTTCTTCTACTTAAT
TTTCAAATACTTTATTATCTCGATCCATAGATAGTGAAGCACATCTCCTC
ACAAACACACAAGGTGATATGTCTGATGAGAAGACAAAAACACCGGCAGC
TGAGGATCTCATGTTCGAAGATGGCGTCCGAAGAATCGACATCATTTTCG
CGTATGAAGCGAACGCTGAACTTGATCCACAGCGACAAAAATATTTAGAC
AATTTGAAAGTGTTAGGATTGGAATTTGAACAAGCAAAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00065997-exon-scaffold_448-1575043694:672039..672040 | TCONS_00065997-exon-scaffold_448-1575043694:672039..672040 | Clytia hemisphaerica | exon |
| TCONS_00065997-exon-scaffold_448-1575043694:662150..662356 | TCONS_00065997-exon-scaffold_448-1575043694:662150..662356 | Clytia hemisphaerica | exon |
| TCONS_00065997-exon-scaffold_448-1510915933:672039..672040 | TCONS_00065997-exon-scaffold_448-1510915933:672039..672040 | Clytia hemisphaerica | exon |
| TCONS_00065997-exon-scaffold_448-1510915933:662150..662356 | TCONS_00065997-exon-scaffold_448-1510915933:662150..662356 | Clytia hemisphaerica | exon |
| TCONS_00065997-exon-scaffold_448-1491911889:672039..672040 | TCONS_00065997-exon-scaffold_448-1491911889:672039..672040 | Clytia hemisphaerica | exon |
| TCONS_00065997-exon-scaffold_448-1491911889:662150..662356 | TCONS_00065997-exon-scaffold_448-1491911889:662150..662356 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_448 | supercontig | scaffold_448:662150..672040 - |
Blast
The following BLAST results are available for this feature:
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