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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00066014 ID=TCONS_00066014|Name=TCONS_00066014|organism=Clytia hemisphaerica|type=transcript|length=1395bp
AAGGCTCTTCTAAGatctgaaatgaaaatttaagaTATATATTTGGCCAG
GACTTTCAGTTATAATGCATTTCAGCCAAATAATTGTCGAATAGTTTATC
CAATACCTGATCGATACAaaaatttcctattagcagattcgtttaaaaaa
gtcacgaaaaaacgtcgagtaaagctctgattgactgagattttgaaaaa
tgtttatgtgttcaattttcagattttcagacttttttacatgaacctgc
taataggaaattcgTGTACTGTTTGTCCTTAAAGAACCAGCATGGAAAAT
GATCAATTACTGACATGATAAAAACATCCAAGTAAAATGTAAGGGTTAGA
AGATTTCGGTTTAAAAACGTTATAATGATGAATAAAATTGTGTCTGTGAT
AATGGGTTGCTATGGAAACATACATAAATACAAAGGGATAACTATTTAAT
ATCAAACcattctaaaaaaaatctaaaaaaattaaacagaacgaacaaaa
atttctaaaaaaatatgaaaggCATTGAAATAATTGTAACACTTAGAGGA
ACTTCACAATTTTTAAGAGTATTTATGGCTTCATCCTACGGTATACATTC
CTATCaacacttttcgataaaggggTTGGGTTtagttaaaaataaaatta
cgaCCGGCTGATAGTTGagtataaattaaaaatttataagTGATGTAACT
TCctccattatggaagcaaacgttcgaatctgcaAAGGTGATCCCTTACT
acacaaatcgaatgtttgtttTCATAGTGGcggaagttacgtaacttaac
aaaacgATAAACAAACAATAAAGTTAAAAATGTATTGACCTGGTGTTTGT
AACGGGAAAAACGAAAATCAGGATATACAGCTTGATCctttgaaaattat
ttgaaaGAAGCTGCATGTGACTGACTGTAAATGAACTGCAACCAACAGAA
TCAATAAAACACATTCGAAATCAAATCACGGATATCTTATATGGAACACT
GTTAGATAGAGCTTCTCCGTCGTTAGCTAAAAGAAACTAATGTATGAACC
AAACAATTATACTTGCGCGAGCCTTGAAATTTTGAGGTCATTGCAGTGtc
aaaaatacttcaaaagAATGTGGTGTCTACTCCAAGCAAAGACGACGCAT
TATTTTGTCCTAGCTTAGAaaagagtagctctatctagtgctTTTTATGA
GATATCTGTGAATCCAATCCAGCACCAACAAAATGGTAGCAATAGATTAT
TTAAGATTGTTCAGTTTGAGaatttatataatttataaCGATTTGATCTT
CCGGCGAATTATGCCCTTTACAATAAAAAAACGTCAACTTTGAATTTATC
ACAATGTTAACCAAAGCCAGTCTTCCAGGTGAAAAATAATTTNTT Run BLAST on NCBI transcript from alignment at scaffold_448:213955..215349 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00066014 ID=TCONS_00066014|Name=TCONS_00066014|organism=Clytia hemisphaerica|type=transcript|length=1395bp|location=Sequence derived from alignment at scaffold_448:213955..215349 (Clytia hemisphaerica)
AANAAATTATTTTTCACCTGGAAGACTGGCTTTGGTTAACATTGTGATAA
ATTCAAAGTTGACGTTTTTTTATTGTAAAGGGCATAATTCGCCGGAAGAT
CAAATCGttataaattatataaattCTCAAACTGAACAATCTTAAATAAT
CTATTGCTACCATTTTGTTGGTGCTGGATTGGATTCACAGATATCTCATA
AAAagcactagatagagctactctttTCTAAGCTAGGACAAAATAATGCG
TCGTCTTTGCTTGGAGTAGACACCACATTcttttgaagtatttttgaCAC
TGCAATGACCTCAAAATTTCAAGGCTCGCGCAAGTATAATTGTTTGGTTC
ATACATTAGTTTCTTTTAGCTAACGACGGAGAAGCTCTATCTAACAGTGT
TCCATATAAGATATCCGTGATTTGATTTCGAATGTGTTTTATTGATTCTG
TTGGTTGCAGTTCATTTACAGTCAGTCACATGCAGCTTCtttcaaataat
tttcaaagGATCAAGCTGTATATCCTGATTTTCGTTTTTCCCGTTACAAA
CACCAGGTCAATACATTTTTAACTTTATTGTTTGTTTATcgttttgttaa
gttacgtaacttccgCCACTATGAaaacaaacattcgatttgtgtAGTAA
GGGATCACCTTtgcagattcgaacgtttgcttccataatggagGAAGTTA
CATCActtataaatttttaatttatactCAACTATCAGCCGGtcgtaatt
ttatttttaactaAACCCAAcccctttatcgaaaagtgttGATAGGAATG
TATACCGTAGGATGAAGCCATAAATACTCTTAAAAATTGTGAAGTTCCTC
TAAGTGTTACAATTATTTCAATGcctttcatatttttttagaaatttttg
ttcgttctgtttaatttttttagattttttttagaatgGTTTGATATTAA
ATAGTTATCCCTTTGTATTTATGTATGTTTCCATAGCAACCCATTATCAC
AGACACAATTTTATTCATCATTATAACGTTTTTAAACCGAAATCTTCTAA
CCCTTACATTTTACTTGGATGTTTTTATCATGTCAGTAATTGATCATTTT
CCATGCTGGTTCTTTAAGGACAAACAGTACAcgaatttcctattagcagg
ttcatgtaaaaaagtctgaaaatctgaaaattgaacacataaacattttt
caaaatctcagtcaatcagagctttactcgacgttttttcgtgacttttt
taaacgaatctgctaataggaaattttTGTATCGATCAGGTATTGGATAA
ACTATTCGACAATTATTTGGCTGAAATGCATTATAACTGAAAGTCCTGGC
CAAATATATAtcttaaattttcatttcagatCTTAGAAGAGCCTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00066014-exon-scaffold_448-1491911889:213955..215349 | TCONS_00066014-exon-scaffold_448-1491911889:213955..215349 | Clytia hemisphaerica | exon |
| TCONS_00066014-exon-scaffold_448-1510915933:213955..215349 | TCONS_00066014-exon-scaffold_448-1510915933:213955..215349 | Clytia hemisphaerica | exon |
| TCONS_00066014-exon-scaffold_448-1575043694:213955..215349 | TCONS_00066014-exon-scaffold_448-1575043694:213955..215349 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_448 | supercontig | scaffold_448:213955..215349 . |
Blast
The following BLAST results are available for this feature:
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